Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,778,806	T→A	10.8%	K166* (AAA→TAA)	ydiP ←	putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	1,778,806	0	T→A	10.8%	7.0 ‑1.9 0.0	46	K166* (AAA→TAA)	ydiP	putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  new base (2/3):  ref base (30/11):  total (32/14)
Fisher's exact test strand distribution p-value = 1.57e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

GCCAGGAGATCTCTGCCTGTGATAATTCAGTATTAGTGAGTGACCATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGTTCTATCACCACAA  >  NC_000913/1778542‑1779093                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                cgcAGGAGGTCTCTGCCTGTGATAAATCAAGAATAGTGAGTGACCATTTTTGTTCCGTCAATAGGCGTTGAAAAACAAAGTTAAAAAGGGAAATACGATACTCTTTGGTAAATTCATGGCCAATATAAATGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTAATATTCAGATAGAAAAGAATATCTTTTAACAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTAAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGc                                                                                                                                                                                                                                                             <  1:947254/299‑1 (MQ=255)     ggAGATCTCTGCCTGTGATAATTCAGTATTAGTGAGTGACCATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAAt                                                                                                                                                                                                                                                         >  1:231342/1‑301 (MQ=255)         aattctGCCTTTGATAAATCAGGATTAGGGAGGGACCATTTTGCTTCCGGCATACGCCGGTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATTAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAGAGAATGGCTAACGTATAGGCAAATGc                                                                                                                                                                                                                                                       <  2:172348/296‑1 (MQ=255)               gCCTGTGATAATTCAGTATTAGTGAGTGACCATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTAAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATa                                                                                                                                                                                                                                               >  2:940966/1‑301 (MQ=255)                   gtgATAATTCAGTATTAGTGAGTGACCATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGa                                                                                                                                                                                                                                           >  1:353559/1‑301 (MQ=255)                        aaTTCAGTATTAGTGAGTTACCAGTTTGCTTCCATCATACGCCGATGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATATTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTAAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATg                                                                                                                                                                                                                                      <  2:947494/301‑1 (MQ=255)                                            ccATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTg                                                                                                                                                                                                                   >  1:303433/1‑300 (MQ=255)                                                                               aGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGtttt                                                                                                                                                                               >  1:121247/1‑301 (MQ=255)                                                                                     tAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGAc                                                                                                                                                                         <  2:121247/301‑1 (MQ=255)                                                                                             aTACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCtttt                                                                                                                                                                  >  1:507949/1‑300 (MQ=255)                                                                                               aCGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGc                                                                                                                                                                                                                                                       <  1:820481/213‑1 (MQ=255)                                                                                               aCGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAAAGTATAGGCAAATGc                                                                                                                                                                                                                                                       >  2:820450/1‑213 (MQ=255)                                                                                                         ttGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCt                                                                                                                                                                                               <  1:50130/259‑1 (MQ=255)                                                                                                         ttGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCt                                                                                                                                                                                               >  2:50130/1‑259 (MQ=255)                                                                                                           ggTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTAATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCAGCGGCa                                                                                                                                                   >  2:643527/1‑301 (MQ=255)                                                                                                                aTTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTa                                                                                                                                               >  1:370262/1‑300 (MQ=255)                                                                                                                                           cACGAAATTTTTTCGATAACTGTTCTAAAGTGATGTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATGCCCCTGCTCCGAACGATGAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAACTGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAGTTACCGGACAAGAATGCGGTTGCAGTAGCt                                                                                                                    <  1:680531/300‑1 (MQ=255)                                                                                                                                                          aTAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGccc                                                                                                     <  1:643551/300‑1 (MQ=255)                                                                                                                                                                gTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCctgaaa                                                                                              >  1:912877/1‑301 (MQ=255)                                                                                                                                                                gTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCctgaaa                                                                                              >  1:608384/1‑301 (MQ=255)                                                                                                                                                                 ttCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCctgaaac                                                                                             <  2:608366/301‑1 (MQ=255)                                                                                                                                                                                          ttattattCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGACACTGAAAGCCGTACAGCGCACAGGtc                                                                     >  2:425682/1‑299 (MQ=255)                                                                                                                                                                                                ttCAGATAGAAAAGAAAATCTCATATTAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCATAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAAAGATGATGTGTGGCTATTGTTACTTTGCGGCAAAATAACACTTAGCCCATTAAATAAGGTTGTAATGACTTCTTTTCCCTGCTCCGCGGCAATTACCGGACAAGAATGCGGTTTCAGTAGCTGCTTTTCCTCACCCCCCTGAAACTGAAAGCCGTGAAGCGCCCGTGTACAcgtc                                                               >  2:169718/1‑300 (MQ=255)                                                                                                                                                                                                    gATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACtt                                                                                                                                                                                                   >  1:653374/1‑164 (MQ=255)                                                                                                                                                                                                    gATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACtt                                                                                                                                                                                                   <  2:653350/164‑1 (MQ=255)                                                                                                                                                                                                     aTAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTAAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGcc                                                         <  1:941011/301‑1 (MQ=255)                                                                                                                                                                                                             gAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGCTCGtt                                                 >  2:196729/1‑301 (MQ=255)                                                                                                                                                                                                             gAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCCCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAACATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGTCAAGAATGCGGTTGCAGTATCTGTTTTTCCTCAGCCCCCTGAAACTGAAATCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCggt                                                 >  1:72951/1‑299 (MQ=255)                                                                                                                                                                                                                  tCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTAAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGt                                            >  2:702329/1‑301 (MQ=255)                                                                                                                                                                                                                            gAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGCGGCCa                                   >  1:790214/1‑300 (MQ=255)                                                                                                                                                                                                                                 tCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCACCAGCCCCCTGAAACGGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTTCCGTCCGCGGCCACCCCAt                             >  2:784569/1‑301 (MQ=255)                                                                                                                                                                                                                                  cTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAAAGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACATTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTCGCAGTAGCCGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTAAACGTCGTTGCCGGATCGTTAACGTCAGAAGCCACCGCATg                            >  1:910720/1‑301 (MQ=255)                                                                                                                                                                                                                                         aaTATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGAACGTTAACGTCAGAGGCCACCGCATGCAGc                        >  1:401494/1‑298 (MQ=255)                                                                                                                                                                                                                                          atatACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGc                                                                                                                                                                                                                                                             <  2:820692/68‑1 (MQ=255)                                                                                                                                                                                                                                          atatACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGc                                                                                                                                                                                                                                                             >  1:820723/1‑68 (MQ=255)                                                                                                                                                                                                                                               ccccTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATACGGTTTTTATGCCTTCTTTTCCCTTCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCACTAGCTGATTTTCCTTCGCCCCCTGAAACTGAAAACCGTACAGCTCACAGGTACACGTCGTTTCCGGACCGTTAACGTGAGAGGCCACCCCACCCAACCTGCCGGGt               >  1:752395/1‑301 (MQ=255)                                                                                                                                                                                                                                               ccccTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACGGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCAGCGt               >  2:154745/1‑301 (MQ=255)                                                                                                                                                                                                                                               ccccTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGt               >  2:708308/1‑301 (MQ=255)                                                                                                                                                                                                                                               ccccTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGt               >  1:651300/1‑301 (MQ=255)                                                                                                                                                                                                                                               ccccTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGAACACGTCGTTGCCGGATCGTTAACGTCAGGAGCCACAGCATGACGCCTGCcgggg               >  2:858701/1‑298 (MQ=255)                                                                                                                                                                                                                                                    gCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGCCAAAAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCAACGCCTGCACCCTGCCGCGTTCTAt          >  1:479951/1‑301 (MQ=255)                                                                                                                                                                                                                                                    gCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACAcgt                                                                >  2:923547/1‑247 (MQ=255)                                                                                                                                                                                                                                                    gCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACAcgt                                                                <  1:923590/247‑1 (MQ=255)                                                                                                                                                                                                                                                    gCTCCGAACGATAAGCATTTTTAAAACTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCGAAGGCACCCGCATGCAGCCTGCCGGGTTCttt          >  2:181614/1‑299 (MQ=255)                                                                                                                                                                                                                                                          aaCGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCGTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGTTCTATcaccac    <  1:858734/301‑1 (MQ=255)                                                                                                                                                                                                                                                            cGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTAAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGTTCTATCACCACaa  >  1:948672/1‑301 (MQ=255)                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                GCCAGGAGATCTCTGCCTGTGATAATTCAGTATTAGTGAGTGACCATTTTGCTTCCGTCATACGCCGTTGAATAACATAGTTAATAGGGGAAATACGATACTCTTTGGTAAATTCATGGCAAATATAACTGACGCTGGCACGAAATTTTTTCGATAACTGTTCTAAAGTGATTTTTTCGCGATAATTATTATTCAGATAGAAAAGAATATCTTTTATCAGAACATCTTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGAAGATGTTTGGCTATTTTTACTTTGCGGCAAAATCACACTTAGCTCATTAAATAAGGTTTTTATGACTTCTTTTCCCTGCCCCGCGGCAATTACCGGACAAGAATGCGGTTGCAGTAGCTGATTTTCCTCAGCCCCCTGAAACTGAAAGCCGTACAGCGCACAGGTACACGTCGTTGCCGGATCGTTAACGTCAGAGGCCACCGCATGCAGCCTGCCGCGTTCTATCACCACAA  >  NC_000913/1778542‑1779093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.