New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1152249 | 72 (1.230) | 4 (0.070) | 3/588 | 8.7 | 5.5% | coding (311/1242 nt) | fabF | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II |
? | NC_000913 | = 1152266 | 68 (1.180) | coding (328/1242 nt) | fabF | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below cutoff threshold. |
TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1151953‑1152249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC < NC_000913/1152266‑1151971 TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCTTTTCGATACTAGCGCCTATGCAACGACATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTCTCTCGCGCAAAGAACACCGCAAGATGGATGCCTTAATGCAATATGGCATTGTAGCTGGCGTTGAGACACTGCAGGATTCTGACCTTGAAATAACTGAAGAGACCGCAACCCGCATTGGTGCCGACAtt > 1:174314/1‑299 ctcttccgatCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGA < 1:197999/291‑1 TGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCCAATCCCGGAGCCAAGTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAAgatcggaagag > 2:198226/1‑290 cTGCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGC < 2:100755/300‑1 GCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCag > 1:100628/1‑299 GCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCC < 2:289907/300‑1 CCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC < 2:394672/300‑1 TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1151953‑1152249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC < NC_000913/1152266‑1151971 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |