| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 233,963 | (GT)4→5 | intergenic (‑8/+64) | mltD ← / ← gloB | putative membrane‑bound lytic murein transglycosylase D/hydroxyacylglutathione hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 233,954 | 1 | . | T | 83.6% | 214.6 / 33.1 | 61 | coding (2/1359 nt) | mltD | putative membrane‑bound lytic murein transglycosylase D |
| Reads supporting (aligned to +/- strand): ref base . (6/4); new base T (21/30); total (27/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.05e-01 | |||||||||||
| * | NC_000913 | 233,954 | 2 | . | G | 83.6% | 206.2 / 35.1 | 61 | coding (2/1359 nt) | mltD | putative membrane‑bound lytic murein transglycosylase D |
| Reads supporting (aligned to +/- strand): ref base . (6/4); new base G (21/30); total (27/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.08e-01 | |||||||||||
CCCATCGTCCATCCATCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑TGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGTTGTTGCAATAATGTTTCTT > NC_000913/233806‑234094 || cccATCGTCCATCCATCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑t < 2:918490/150‑1 (MQ=255) cGTCCATCCATCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑tgtgtgt < 2:602206/151‑1 (MQ=255) gTCCATCCATCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑tgtgtgtg < 1:509966/151‑1 (MQ=255) ccatccatCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtg > 2:624185/1‑150 (MQ=255) ccatccatCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtg < 2:964947/151‑2 (MQ=255) catccatcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgt > 2:982594/1‑149 (MQ=255) atccatcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtc < 2:71371/151‑4 (MQ=255) atccatcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtc > 2:80803/1‑148 (MQ=255) tccatcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtc > 1:668145/1‑147 (MQ=255) tccatcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtc > 1:941931/1‑147 (MQ=255) atcGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtcaata < 1:456885/151‑8 (MQ=255) cGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑Tgtgtgtgtgtcaatagt > 1:623967/1‑142 (MQ=255) gACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTa < 1:35759/150‑1 (MQ=255) cTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTaaa > 2:432949/1‑150 (MQ=255) ttGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTaaa > 1:649490/1‑149 (MQ=255) aaaCTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAgacga < 1:183644/151‑1 (MQ=255) aaaCTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGATACTCTGGCATCCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAgtcga < 1:183650/151‑1 (MQ=255) aaCTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAgacgac < 1:812679/151‑1 (MQ=255) aaCTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAgacgac > 1:188939/1‑151 (MQ=255) gctTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATaa < 2:234234/151‑1 (MQ=255) gctTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATa > 1:283692/1‑150 (MQ=255) ttCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACg > 2:357889/1‑151 (MQ=255) tCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAAc < 1:382484/149‑1 (MQ=255) tCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACg < 2:760920/150‑1 (MQ=255) ccccTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACgg < 1:432304/150‑1 (MQ=255) ccccTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGc < 2:997998/151‑1 (MQ=255) aCCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGa < 1:240574/151‑1 (MQ=255) aGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGcc > 2:1017292/1‑151 (MQ=255) cTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCg > 2:449463/1‑150 (MQ=255) cTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCg < 2:18826/150‑1 (MQ=255) gCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGaaa < 2:435387/151‑1 (MQ=255) gCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGaa > 1:208854/1‑150 (MQ=255) gcgtgcTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTAt < 2:435918/151‑1 (MQ=255) gcgtgcTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTAt < 2:284117/151‑1 (MQ=255) gcgtgcTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTAt < 2:427324/151‑1 (MQ=255) cgtgcTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATc < 1:955365/151‑1 (MQ=255) gcTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGa < 1:170107/151‑1 (MQ=255) gTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAAcc < 2:393342/151‑1 (MQ=255) tGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCt < 2:759276/150‑1 (MQ=255) gAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTAt < 1:110764/151‑1 (MQ=255) gAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTAt < 2:131071/151‑1 (MQ=255) gAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTAt > 2:18426/1‑151 (MQ=255) aCGTTGCCGGTACTCTGGCGACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTAtct < 2:825188/151‑1 (MQ=255) tGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAAc > 2:746372/1‑151 (MQ=255) cAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCAt < 2:1004087/151‑1 (MQ=255) aaCCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCa > 2:957436/1‑149 (MQ=255) aaCCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATg > 1:208206/1‑151 (MQ=255) ccACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCa > 1:266116/1‑150 (MQ=255) gAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACg > 2:780234/1‑151 (MQ=255) aGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGctct < 2:286428/151‑1 (MQ=255) aGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGctct > 1:273667/1‑151 (MQ=255) aGGACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGctct < 2:188934/151‑1 (MQ=255) ggACAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCtt < 1:807174/151‑1 (MQ=255) ggACAGAGGCGAGTAATATCGCTTGTGCCTTCA‑‑TGTGTGTGTTGCAATAGTTGCTTAAAAGCCGACCGATCATAACGGCGAACGTAGCCGATGACAAGAAAGGTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGct < 2:693920/148‑1 (MQ=255) cAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTc > 2:28586/1‑149 (MQ=255) cAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTc > 2:697809/1‑149 (MQ=255) cAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTc > 2:685046/1‑149 (MQ=255) cAGAGGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTc > 1:931224/1‑149 (MQ=255) agGCGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGgtt < 2:701110/151‑1 (MQ=255) cGAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGgttgtt > 1:552609/1‑151 (MQ=255) gAGTAATATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGttgttg > 1:54965/1‑151 (MQ=255) aaTATCGCTTTTGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGTTGTTGCaat < 1:655738/151‑1 (MQ=255) tttGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGTTGTTGCAATAATGttt < 2:898695/149‑1 (MQ=255) tGCCTTCATGTGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGTTGTTGCAATAATGTttctt < 2:703208/150‑1 (MQ=255) || CCCATCGTCCATCCATCGTGCCTGACTTGTAAACTTTGCTGCTTCCCCTTGACCAGCTGCAGAAAGGCTCTGTGCGTGCTGTTGAACGTTGCCGGTACTCTGGCAACCCACGAGCAGGACAGAGGCGAGTAATATCGCTTTTGCCTTCA‑‑TGTGTGTGT‑‑CAATAGTTGCTTAAAAGACGACCGATCATAACGGCGAACGGAGCCGATGACAAGAAAGTTTTATCAGAACCTATCTTTCTTTGACCTTAACCATGCAAAACGCTCTTCAGGTTGTTGCAATAATGTTTCTT > NC_000913/233806‑234094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |