| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,804,648 | Δ38 bp | intergenic (+187/‑130) | nrdF → / → proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2804648 | 2804685 | 38 | 61 [0] | [0] 61 | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2804647 | 0 (0.000) | 54 (0.880) | 49/278 | 0.4 | 100% | intergenic (+186/‑168) | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein |
| ? | NC_000913 | 2804686 = | 0 (0.000) | intergenic (+225/‑129) | nrdF/proV | ribonucleoside‑diphosphate reductase 2, beta subunit, ferritin‑like protein/glycine betaine/proline ABC transporter periplasmic binding protein | |||||
ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGCGATTTGCTCGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATT > NC_000913/2804538‑2804835 | aaataattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGc > 2:161536‑M2/149‑150 (MQ=255) taattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATc > 2:989676‑M2/146‑150 (MQ=255) aattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCaa < 1:241472‑M2/7‑1 (MQ=255) cccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAatat < 1:8811‑M2/10‑1 (MQ=255) ccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTc > 1:852395‑M2/140‑151 (MQ=255) gccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCAt > 1:719655‑M2/138‑151 (MQ=255) ccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATg > 2:871492‑M2/137‑151 (MQ=255) caaatagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGc > 1:110456‑M2/136‑151 (MQ=255) caaatagctttttatcacgcaaataatttggtgtgatctacactgattctctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCAt < 1:813161‑M2/14‑1 (MQ=255) atagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCcac > 2:257448‑M2/133‑151 (MQ=255) tagctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCcac > 2:833901‑M2/132‑150 (MQ=255) agctttttatcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCcaca < 2:527798‑M2/20‑1 (MQ=255) atcacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCAt < 2:717281‑M2/28‑1 (MQ=255) cacgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAg < 2:247215‑M2/31‑1 (MQ=255) cgcaaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAgg < 2:624591‑M2/32‑1 (MQ=255) aaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGtt < 2:330179‑M2/36‑1 (MQ=255) aaataatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGtt < 2:711852‑M2/36‑1 (MQ=255) taatttgtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGcc > 1:765036‑M2/113‑151 (MQ=255) gtggtgatctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTc > 2:319607‑M2/107‑147 (MQ=255) tctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGt > 2:685244‑M2/100‑151 (MQ=255) tctacactgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGt > 1:264949‑M2/100‑151 (MQ=255) actgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGtt < 2:693859‑M2/57‑1 (MQ=255) tgatactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGtt > 2:468283‑M2/93‑149 (MQ=255) atactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAggg < 2:293259‑M2/61‑1 (MQ=255) tactctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATACCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGt > 1:268043‑M2/90‑151 (MQ=255) actctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGt < 2:167124‑M2/62‑1 (MQ=255) ttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGaaaa > 2:619030‑M2/83‑150 (MQ=255) tgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGaaaaa < 2:357492‑M2/69‑1 (MQ=255) tcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTAt > 1:541398‑M2/74‑151 (MQ=255) cgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTAt < 1:576685‑M2/78‑1 (MQ=255) cctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTc < 1:401460‑M2/81‑1 (MQ=255) ctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTcc > 2:164484‑M2/70‑151 (MQ=255) tgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTcc > 1:804835‑M2/69‑150 (MQ=255) gaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCa < 1:978623‑M2/83‑1 (MQ=255) aaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCAtt < 2:564063‑M2/85‑1 (MQ=255) aaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCAtt > 2:358955‑M2/67‑151 (MQ=255) attcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAatata < 2:880047‑M2/95‑1 (MQ=255) caggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCg < 1:549988‑M2/98‑1 (MQ=255) caggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCg > 1:577181‑M2/54‑151 (MQ=255) aggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCg > 2:558250‑M2/53‑150 (MQ=255) gcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGa > 2:412401‑M2/51‑149 (MQ=255) cgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTCATATATCGACAt > 1:666833‑M2/50‑151 (MQ=255) cgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACAt < 1:690650‑M2/102‑1 (MQ=255) ttttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACAt > 1:12899‑M2/48‑149 (MQ=255) ttttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATACCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGa < 2:268037‑M2/105‑1 (MQ=255) ttcgctatctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACa > 1:543187‑M2/44‑150 (MQ=255) atctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATaa > 1:374874‑M2/38‑149 (MQ=255) atctttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATaa > 2:118163‑M2/38‑149 (MQ=255) ttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAAt > 1:295642‑M2/34‑151 (MQ=255) ttgacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAAt > 2:625358‑M2/34‑151 (MQ=255) gacaaaaaatatcaactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATc < 1:539730‑M2/119‑1 (MQ=255) caactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCAt < 1:748258‑M2/131‑1 (MQ=255) caactttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCAt < 1:989702‑M2/131‑1 (MQ=255) tttctcgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCa > 2:1004307‑M2/16‑150 (MQ=255) cgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaattaaa < 2:496314‑M2/141‑1 (MQ=255) cgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaattaa < 2:868586‑M2/140‑1 (MQ=255) cgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaatta < 2:518688‑M2/139‑1 (MQ=255) cgatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGCAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaattaa > 1:19409‑M2/11‑150 (MQ=255) gatttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaattaaat < 1:17794‑M2/142‑1 (MQ=255) ttgctcGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCaattaaatta < 1:991491‑M2/144‑1 (MQ=255) cGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAAtt < 2:605714‑M2/150‑1 (MQ=255) | ATTTGTGGTGATCTACACTGATACTCTGTTGCATTATTCGCCTGAAACCACAATATTCAGGCGTTTTTTCGCTATCTTTGACAAAAAATATCAACTTTCTCGATTTGCTCTCAGCCCTTATATCACGGGAAATTCCGGCGATTTGCTCGCATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATT > NC_000913/2804538‑2804835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |