Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,377,068 Δ21 bp coding (333‑353/639 nt) sspA ← stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3377068 3377088 21 66 [1] [0] 65 sspA stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 33770671 (0.020)64 (0.980) 58/294 0.2 99.2% coding (354/639 nt) sspA stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog
?NC_000913 3377089 = 0 (0.000)coding (332/639 nt) sspA stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog

ATAGCAATCGACCAGGCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGG  >  NC_000913/3376941‑3377238
                                                                                                                                                    |                                                                                                                                                     
acgccacagcagcggagcaagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTAc                                                                                                                                                     <  1:216944‑M2/3‑1 (MQ=255)
    cacagcagcggagcaagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGt                                                                                                                                                 <  1:837380‑M2/7‑1 (MQ=255)
    cacagcagcggagcaagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGt                                                                                                                                                 >  1:384717‑M2/145‑151 (MQ=255)
     acagcagcggagcaagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTc                                                                                                                                                <  2:472328‑M2/8‑1 (MQ=255)
           gcggagcaagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTc                                                                                                                                          <  2:760490‑M2/14‑1 (MQ=255)
                  aagatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTcgatgcg                                                                                                                                    >  1:319916‑M2/131‑150 (MQ=255)
                   agatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTcgatgcgat                                                                                                                                  <  1:115736‑M2/22‑1 (MQ=255)
                   agatagcaatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTcgatgcgat                                                                                                                                  >  2:999950‑M2/130‑151 (MQ=255)
                         caatcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGt                                                                                                                            >  1:989629‑M2/124‑151 (MQ=255)
                           atcgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTa                                                                                                                           >  1:172040‑M2/122‑150 (MQ=255)
                             cgaccaggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACa                                                                                                                         <  1:625947‑M2/31‑1 (MQ=255)
                                 caggctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGAc                                                                                                                      >  1:121816‑M2/116‑149 (MQ=255)
                                     ctgaactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCttt                                                                                                                >  2:508540‑M2/112‑151 (MQ=255)
                                        aactcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCAc                                                                                                             <  1:93703‑M2/43‑1 (MQ=255)
                                           tcatcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACcgc                                                                                                          >  1:871175‑M2/106‑151 (MQ=255)
                                             atcgctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACcgcg                                                                                                         >  2:312089‑M2/104‑150 (MQ=255)
                                                gctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCt                                                                                                     >  1:249856‑M2/101‑151 (MQ=255)
                                                 ctcaggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCt                                                                                                     >  1:541745‑M2/100‑150 (MQ=255)
                                                   caggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTa                                                                                                    <  2:893767‑M2/52‑1 (MQ=255)
                                                   caggaagtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTAc                                                                                                   <  2:333007‑M2/53‑1 (MQ=255)
                                                        agtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTa                                                                                             <  2:820176‑M2/59‑1 (MQ=255)
                                                         gtacggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTaa                                                                                            <  2:566868‑M2/60‑1 (MQ=255)
                                                           acggcttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAAc                                                                                          <  1:402341‑M2/62‑1 (MQ=255)
                                                               cttctgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGc                                                                                      >  1:1007667‑M2/86‑151 (MQ=255)
                                                                   tgaccgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATc                                                                                   >  2:455718‑M2/82‑150 (MQ=255)
                                                                     accgaagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGt                                                                                >  1:350228‑M2/80‑151 (MQ=255)
                                                                         aagaccggcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCg                                                                            <  2:723923‑M2/76‑1 (MQ=255)
                                                                                gcgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCgg                                                                     <  2:897671‑M2/83‑1 (MQ=255)
                                                                                 cgcaatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCggg                                                                    >  2:286117‑M2/68‑151 (MQ=255)
                                                                                   caatcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGaa                                                                  <  1:841692‑M2/86‑1 (MQ=255)
                                                                                     atcgccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGaaa                                                                 >  1:427308‑M2/64‑150 (MQ=255)
                                                                                        gccagcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCt                                                             <  1:850318‑M2/91‑1 (MQ=255)
                                                                                           agcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCAt                                                          <  2:341358‑M2/94‑1 (MQ=255)
                                                                                           agcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCAt                                                          <  1:79085‑M2/94‑1 (MQ=255)
                                                                                            gcagttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCAt                                                          <  1:945609‑M2/94‑1 (MQ=255)
                                                                                               gttcttcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAg                                                      <  2:712223‑M2/98‑1 (MQ=255)
                                                                                                    tcgcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGata                                                   <  1:802214‑M2/101‑1 (MQ=255)
                                                                                                      gcgcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTcc                                               >  2:386186‑M2/47‑151 (MQ=255)
                                                                                                        gcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCAt                                             <  1:956555‑M2/107‑1 (MQ=255)
                                                                                                        gcagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCACCTCCAGATATTCCa                                              >  1:539582‑M2/45‑150 (MQ=255)
                                                                                                         cagttgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATa                                            <  1:247796‑M2/108‑1 (MQ=255)
                                                                                                             tgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatg                                         <  1:847941‑M2/111‑1 (MQ=255)
                                                                                                             tgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatg                                         <  1:356930‑M2/111‑1 (MQ=255)
                                                                                                             tgcttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAat                                          >  1:298926‑M2/40‑149 (MQ=255)
                                                                                                               cttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatgat                                       <  1:748332‑M2/113‑1 (MQ=255)
                                                                                                                ttacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatgatg                                      >  2:746417‑M2/37‑150 (MQ=255)
                                                                                                                 tacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatgatg                                      <  1:143654‑M2/114‑1 (MQ=255)
                                                                                                                 tacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAatgatg                                      <  2:447195‑M2/114‑1 (MQ=255)
                                                                                                                 tacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGc                                     <  1:228002‑M2/115‑1 (MQ=255)
                                                                                                                 tacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGc                                     <  2:569444‑M2/115‑1 (MQ=255)
                                                                                                                 tacgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGc                                     <  2:387046‑M2/115‑1 (MQ=255)
                                                                                                                  acgtgcggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCg                                    >  1:994089‑M2/35‑150 (MQ=255)
                                                                                                                        ggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTcc                             >  2:1009334‑M2/29‑151 (MQ=255)
                                                                                                                        ggcatctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTcc                             <  1:961528‑M2/123‑1 (MQ=255)
                                                                                                                          catctgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCca                           <  2:339777‑M2/125‑1 (MQ=255)
                                                                                                                              tgcttcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCCCAgg                       >  2:256550‑M2/23‑151 (MQ=255)
                                                                                                                                  tcagaagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTc                    >  1:282572‑M2/19‑150 (MQ=255)
                                                                                                                                      aagctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTc               <  1:528613‑M2/137‑1 (MQ=255)
                                                                                                                                        gctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCAc             >  1:242208‑M2/13‑151 (MQ=255)
                                                                                                                                         ctgaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCa              >  1:644591‑M2/12‑149 (MQ=255)
                                                                                                                                           gaaccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACg            <  1:184841‑M2/140‑1 (MQ=255)
                                                                                                                                             accgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATcc        >  1:522892‑M2/8‑151 (MQ=255)
                                                                                                                                              ccgttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATcca       <  1:133952‑M2/145‑1 (MQ=255)
                                                                                                                                                 ttgTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATccacc     >  1:964911‑M2/4‑150 (MQ=255)
                                                                                                                                                   gTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAgg  <  1:508554‑M2/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ATAGCAATCGACCAGGCTGAACTCATCGCTCAGGAAGTACGGCTTCTGACCGAAGACCGGCGCAATCGCCAGCAGTTCTTCGCGCAGTTGCTTACGTGCGGCATCTGCTTCAGAAGCTGAACCGTTGATGATGGTGTTCATCAGCGTGTACCAGTCTTTTTCGATGCGATGCATGTACAGACGGCTTTCACCGCGAGCTACCGGGTAAACAGGCATCAGTGGCGGATGCGGGAAACGCTCATCCAGATATTCCATAATGATGCGAGATTCCCACAGGGTCAGCTCACGATCCACCAGG  >  NC_000913/3376941‑3377238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: