Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,961,829 IS5 (–) +4 bp intergenic (+34/‑140) argS → / → yecT arginyl‑tRNA synthetase/uncharacterized protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1961829 =0 (0.000)48 (0.760) 43/298 0.7 100% intergenic (+34/‑143) argS/yecT arginyl‑tRNA synthetase/uncharacterized protein
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 19618320 (0.000)90 (1.420) 58/298 0.2 100% intergenic (+37/‑140) argS/yecT arginyl‑tRNA synthetase/uncharacterized protein
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 138 total aligned reads displayed.

CGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGAATACCGCAGTGTTTAAATT  >  NC_000913/1961684‑1961982
                                                                                                                                                    |                                                                                                                                                      
gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcc                                                                                                                                                      <  1:403977‑M1/6‑1 (MQ=255)
    agaaactctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATc                                                                                                                                                  <  1:522856‑M1/10‑1 (MQ=255)
      aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAg                                                                                                                                                >  2:888254‑M1/140‑151 (MQ=255)
       aaCGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgc                                                                                                                                               <  2:702673‑M1/151‑10 (MQ=255)
            agaagTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaata                                                                                                                                          <  2:661659‑M1/151‑15 (MQ=255)
             cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCttt                                                                                                                                           >  2:832018‑M1/133‑149 (MQ=255)
              ttttctggtctgacgtcgcttactgctgaattcactgtcggcgtgggtaagttgatgactcatgatgaacactgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTGAGCCGATCAGGCtttttt                                                                                                                                        <  1:381870‑M1/20‑1 (MQ=255)
              aagTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataag                                                                                                                                        <  2:654164‑M1/151‑17 (MQ=255)
                 tGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcgg                                                                                                                                     >  2:189897‑M1/1‑132 (MQ=255)
                    gTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcgggga                                                                                                                                  <  2:883305‑M1/151‑23 (MQ=255)
                     gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGcc                                                                                                                                  <  1:630584‑M1/26‑1 (MQ=255)
                      tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCAt                                                                                                                                <  2:751579‑M1/28‑1 (MQ=255)
                      aaCAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaa                                                                                                                                <  1:9570‑M1/151‑25 (MQ=255)
                      aaCAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaa                                                                                                                                 >  2:161227‑M1/1‑127 (MQ=255)
                       aCAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaat                                                                                                                               <  2:847853‑M1/151‑26 (MQ=255)
                              tCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctc                                                                                                                        >  2:223237‑M1/1‑119 (MQ=255)
                                 ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTAtt                                                                                                                     <  1:585471‑M1/39‑1 (MQ=255)
                                  aaaCTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                    <  1:199784‑M1/151‑37 (MQ=255)
                                      gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTg                                                                                                                  >  1:881417‑M1/108‑149 (MQ=255)
                                      gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTg                                                                                                                  >  2:2802‑M1/108‑149 (MQ=255)
                                        tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaa                                                                                                               <  2:668672‑M1/45‑1 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAAt                                                                                                             >  1:671549‑M1/105‑151 (MQ=255)
                                         cacaACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               >  2:842400‑M1/1‑108 (MQ=255)
                                               actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACAt                                                                                                       <  1:302225‑M1/53‑1 (MQ=255)
                                                        gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt                                                                                              >  1:403180‑M1/90‑151 (MQ=255)
                                                            gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTtct                                                                                          >  1:19240‑M1/86‑151 (MQ=255)
                                                            gCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                          <  2:445459‑M1/151‑63 (MQ=255)
                                                              aagttgatgactcatgatgacccctgttctatggctccaaatgacaaacatgatctcatatcagggacttttgcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGGATTCGGAAAATGGCCATGCCATTGTTTTCTCa                                                                                        >  1:952791‑M1/84‑151 (MQ=255)
                                                               gAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAACATATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                        <  1:158426‑M1/150‑65 (MQ=255)
                                                                aaGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                       >  1:444436‑M1/1‑85 (MQ=255)
                                                                 aGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     <  1:777327‑M1/151‑68 (MQ=255)
                                                                 aGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                       >  1:801749‑M1/1‑84 (MQ=255)
                                                                   gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGt                                                                                    >  2:374498‑M1/79‑150 (MQ=255)
                                                                    tGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  >  1:412498‑M1/1‑81 (MQ=255)
                                                                     gggTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                                 <  1:380168‑M1/151‑72 (MQ=255)
                                                                     gggTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  <  2:528771‑M1/150‑71 (MQ=255)
                                                                     gggTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                                                                                   <  2:444577‑M1/149‑70 (MQ=255)
                                                                       gTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt                                                                               <  2:110869‑M1/151‑74 (MQ=255)
                                                                       actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGAt                                                                               <  2:728030‑M1/77‑1 (MQ=255)
                                                                          catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATa                                                                              <  2:577551‑M1/78‑1 (MQ=255)
                                                                           ggATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGAACAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             <  2:30666‑M1/149‑76 (MQ=255)
                                                                             gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAgg                                                                         >  1:765177‑M1/69‑151 (MQ=255)
                                                                               aCGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                       >  1:111844‑M1/1‑70 (MQ=255)
                                                                                    gggTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                                  <  1:8381‑M1/151‑87 (MQ=255)
                                                                                       gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCg                                                                <  1:756900‑M1/92‑1 (MQ=255)
                                                                                       gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGt                                                               <  2:357800‑M1/93‑1 (MQ=255)
                                                                                        aTTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                               <  1:596535‑M1/150‑90 (MQ=255)
                                                                                          tGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                            >  1:364619‑M1/1‑59 (MQ=255)
                                                                                                     gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCa                                                 >  1:513795‑M1/45‑151 (MQ=255)
                                                                                                     agCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                                 >  2:346586‑M1/1‑48 (MQ=255)
                                                                                                       tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAgg                                               <  1:438816‑M1/109‑1 (MQ=255)
                                                                                                       cGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                               <  1:629997‑M1/151‑106 (MQ=255)
                                                                                                         acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAggg                                              <  2:936392‑M1/110‑1 (MQ=255)
                                                                                                          aTGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                            <  1:659260‑M1/151‑109 (MQ=255)
                                                                                                            gTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                           <  2:660313‑M1/150‑110 (MQ=255)
                                                                                                            gTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             >  1:735789‑M1/1‑41 (MQ=255)
                                                                                                            aacatgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAAc                                          <  1:74408‑M1/114‑1 (MQ=255)
                                                                                                               atgatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGAt                                       <  2:154747‑M1/117‑1 (MQ=255)
                                                                                                                 gatctcatatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATa                                      <  1:480263‑M1/118‑1 (MQ=255)
                                                                                                                 cGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                     >  2:542208‑M1/1‑36 (MQ=255)
                                                                                                                      tttCGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                                >  1:92482‑M1/1‑31 (MQ=255)
                                                                                                                      catatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATaa                                     >  2:510139‑M1/28‑146 (MQ=255)
                                                                                                                      catatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACg                                   >  1:940246‑M1/28‑148 (MQ=255)
                                                                                                                      catatcagggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGt                                 >  1:769930‑M1/28‑150 (MQ=255)
                                                                                                                         cGTGAGAGTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                              <  2:346908‑M1/150‑123 (MQ=255)
                                                                                                                            agggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAAttt                          <  1:226151‑M1/130‑1 (MQ=255)
                                                                                                                            agggacttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAAttt                          <  2:638239‑M1/130‑1 (MQ=255)
                                                                                                                              gagTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        <  2:874‑M1/151‑129 (MQ=255)
                                                                                                                               agTGAAGCCTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                       <  2:428976‑M1/151‑130 (MQ=255)
                                                                                                                                acttgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAgg                      >  2:342928‑M1/18‑151 (MQ=255)
                                                                                                                                   tgttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGa                     >  2:150236‑M1/15‑149 (MQ=255)
                                                                                                                                    gttcgcaccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGAAt                   <  2:608926‑M1/137‑1 (MQ=255)
                                                                                                                                      ccTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta                <  1:458617‑M1/151‑137 (MQ=255)
                                                                                                                                       cTGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat               >  2:648826‑M1/1‑14 (MQ=255)
                                                                                                                                        tGATCAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc              >  1:902944‑M1/1‑13 (MQ=255)
                                                                                                                                           ccttccTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGAATACCGCAgt           <  1:13467‑M1/145‑1 (MQ=255)
                                                                                                                                            cAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca          <  1:675624‑M1/151‑143 (MQ=255)
                                                                                                                                            cAGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           >  2:572106‑M1/1‑9 (MQ=255)
                                                                                                                                             aGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag         <  2:350312‑M1/151‑144 (MQ=255)
                                                                                                                                               ggTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt       <  1:842250‑M1/151‑146 (MQ=255)
                                                                                                                                                gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  2:426761‑M1/151‑147 (MQ=255)
                                                                                                                                                 ttAGggaaggttcgaataatcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcaatttaaggcgttatccccagttt      <  2:683850‑M1/150‑147 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  2:861345‑M1/1‑4 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  2:780350‑M1/1‑4 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  1:714659‑M1/1‑4 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  1:403485‑M1/150‑147 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  1:428299‑M1/150‑147 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  1:701164‑M1/150‑147 (MQ=255)
                                                                                                                                                  tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:805179‑M1/1‑3 (MQ=255)
                                                                                                                                                  tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     <  2:386841‑M1/150‑148 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  2:970396‑M1/151‑150 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  1:644107‑M1/151‑150 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  2:344077‑M1/151‑150 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:833186‑M1/1‑2 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:407779‑M1/150‑149 (MQ=255)
                                                                                                                                                   aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttcgcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:177448‑M1/150‑149 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctctgctgactcagtcatttcatttcttcatgtttgagccgattttttctcccttaaattccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  1:736033‑M1/150‑150 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  2:764525‑M1/151‑151 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  2:738164‑M1/151‑151 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:284320‑M1/151‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
CGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGAATACCGCAGTGTTTAAATT  >  NC_000913/1961684‑1961982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.