New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3316548 =79 (1.120)70 (1.030) 61/288 0.2 49.8% coding (979/1488 nt) nusA transcription termination/antitermination L factor
?NC_000913 = 3399212 65 (0.950)coding (767/1104 nt) mreC cell wall structural complex MreBCD transmembrane component MreC

Only 100 of 142 total aligned reads displayed.

GCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCT  >  NC_000913/3399062‑3399362
                                                                                                                                                      |                                                                                                                                                      
  gTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGga                                                                                                                                                      >  1:921398‑M2/1‑149 (MQ=255)
      ggCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgc                                                                                                                                                   >  2:387833‑M2/1‑145 (MQ=255)
      ggCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgac                                                                                                                                                     >  2:498700‑M2/1‑145 (MQ=255)
       gCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgc                                                                                                                                                   >  1:1128326‑M2/1‑144 (MQ=255)
        cGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacg                                                                                                                                                >  2:905638‑M2/1‑143 (MQ=255)
              cAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATc                                                                                                                                          >  1:766453/1‑151 (MQ=255)
                aTACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgacc                                                                                                                                        >  2:1124544‑M2/1‑135 (MQ=255)
                aTACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcac                                                                                                                                        >  2:319101/1‑151 (MQ=255)
                aTACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATca                                                                                                                                         >  1:936559/1‑150 (MQ=255)
                 tACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcac                                                                                                                                        >  2:894682/1‑150 (MQ=255)
                   ccTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGt                                                                                                                                     >  2:711491/1‑151 (MQ=255)
                    cTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgtt                                                                                                                                     <  2:343975‑M2/150‑20 (MQ=255)
                       cGGCATCGTCTGCAGCAGGCGTTCATTAGCACCACGATGCACCTCTCCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgtta                                                                                                                                    >  1:321696‑M2/1‑128 (MQ=255)
                        ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggc                                                                                                                                <  2:667147‑M2/151‑25 (MQ=255)
                         gCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggcc                                                                                                                               <  2:605426‑M2/151‑26 (MQ=255)
                         gCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgc                                                                                                                               >  1:993192/1‑151 (MQ=255)
                           atcatcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgcgc                                                                                                                             >  2:772297/1‑151 (MQ=255)
                             catcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatc                                                                                                                           <  1:1054313‑M2/151‑30 (MQ=255)
                             catcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatc                                                                                                                           >  2:791683‑M2/1‑122 (MQ=255)
                                 tGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgcgcg                                                                                                                            >  2:496490/1‑146 (MQ=255)
                                      cAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgcc                                                                                                                  <  2:620304‑M2/151‑39 (MQ=255)
                                      cAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCg                                                                                                                  >  1:421234/1‑151 (MQ=255)
                                      cAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCg                                                                                                                  >  2:426909/1‑151 (MQ=255)
                                       aGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCg                                                                                                                  >  1:752587/1‑150 (MQ=255)
                                        gACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgcc                                                                                                                  <  2:549016‑M2/149‑39 (MQ=255)
                                         aCGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGt                                                                                                               >  2:554699/1‑151 (MQ=255)
                                         aCGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGt                                                                                                               <  1:957130/151‑1 (MQ=255)
                                          cGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggt                                                                                                              >  2:291803‑M2/1‑109 (MQ=255)
                                          cGTTCATTAGCAACACGATGCACCTCTTCCGCCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgcccgttacggccaatcgcctgcgccagg                                                                                                               <  1:604578‑M2/150‑42 (MQ=255)
                                            ttCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccggtacggccaatcgcctgcgccaggt                                                                                                              <  1:37756‑M2/149‑43 (MQ=255)
                                                ttAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGGTGCAGCCCTGCAGTCGgacgcccgttctgaccgttgcggccaatcgcctgcgccaggttaccg                                                                                                         >  1:477686‑M2/1‑103 (MQ=255)
                                                 tAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggc                                                                                                       <  2:148003‑M2/151‑50 (MQ=255)
                                                  aGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAGACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggct                                                                                                      >  2:765903‑M2/1‑101 (MQ=255)
                                                  aGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGa                                                                                                       >  2:936848/1‑150 (MQ=255)
                                                    cAACACGATGCTCCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACATCAGCAGCAGATAACGCAATCGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttc                                                                                                    >  2:316394‑M2/1‑99 (MQ=255)
                                                    cAAAACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGCTCTGCCCCCCACAGCAGCAGCAGATAACGCAAAAGTTGCAGACCTGCAGCCGGCCGCGCCTGAATCACAGCATACGCGCGCTGGGTATCGAGTTTTACgg                                                                                                        >  1:846931/1‑147 (MQ=255)
                                                        acGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacg                                                                                                >  2:174347‑M2/1‑95 (MQ=255)
                                                        acGATGCACCGCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACa                                                                                                <  1:1022231/151‑1 (MQ=255)
                                                         cGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacgg                                                                                               <  2:775779‑M2/151‑58 (MQ=255)
                                                           aTGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAAcc                                                                                             <  2:183909/151‑1 (MQ=255)
                                                           aTGAAACTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACTCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcg                                                                                             <  1:726627‑M2/151‑60 (MQ=255)
                                                               aCCTCTTACGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACcgcg                                                                                          >  1:1049732/1‑150 (MQ=255)
                                                                  tctTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatcc                                                                                       <  2:834803‑M2/150‑66 (MQ=255)
                                                                     tCCGGCGGCATCGGGTTAGCGCCGTTACGAACTGCCCCCCACCGCAGCAGCAGCTAACGCAAACGTTGCAGCCCTGCAGGCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGAAACGAGTTTTACGGAAGAGACAACCGCGACCg                                                                                      >  1:199702/1‑148 (MQ=255)
                                                                      ccGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggt                                                                                  <  2:970379‑M2/151‑71 (MQ=255)
                                                                      ccGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatgg                                                                                   >  2:619346‑M2/1‑81 (MQ=255)
                                                                       cGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtg                                                                                 >  1:521642‑M2/1‑80 (MQ=255)
                                                                       cGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtg                                                                                 >  1:663078‑M2/1‑80 (MQ=255)
                                                                       cGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatc                                                                                        <  1:389510‑M2/144‑65 (MQ=255)
                                                                       cGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatc                                                                                        >  2:389769‑M2/1‑80 (MQ=255)
                                                                          cGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgt                                                                              <  2:1069143‑M2/151‑75 (MQ=255)
                                                                             cATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgttt                                                                            >  2:519099‑M2/1‑74 (MQ=255)
                                                                             cATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTcc                                                                           <  1:963605/151‑1 (MQ=255)
                                                                              aTCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttat                                                                          <  2:1012260‑M2/151‑79 (MQ=255)
                                                                              aTCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTcc                                                                           <  2:699598/150‑1 (MQ=255)
                                                                                 gggTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGa                                                                       <  1:201228/151‑1 (MQ=255)
                                                                                 gggTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCGGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatctt                                                                       >  1:1080791‑M2/1‑70 (MQ=255)
                                                                                   gTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttca                                                                     >  2:436522‑M2/1‑68 (MQ=255)
                                                                                      aGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatc                                                                   >  2:923426‑M2/1‑65 (MQ=255)
                                                                                       gcgcCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGAc                                                                 >  2:205506/1‑151 (MQ=255)
                                                                                         gcCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGCCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccacc                                                               <  1:615969‑M2/151‑90 (MQ=255)
                                                                                          ccGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccacca                                                              >  2:249069‑M2/1‑61 (MQ=255)
                                                                                          ccGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccacca                                                              >  2:936994‑M2/1‑61 (MQ=255)
                                                                                           cGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccac                                                             <  2:920156‑M2/151‑92 (MQ=255)
                                                                                               aCGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaagcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgat                                                          >  1:1016298‑M2/1‑56 (MQ=255)
                                                                                                   tCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATAACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCgg                                                     >  1:819257/1‑151 (MQ=255)
                                                                                                      gCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgataga                                                       >  1:320943‑M2/1‑49 (MQ=255)
                                                                                                      gCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGaa                                                   <  2:285205/150‑1 (MQ=255)
                                                                                                      gCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAAACGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGaa                                                   <  1:579328/150‑1 (MQ=255)
                                                                                                         ccccACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTc                                                >  2:673979/1‑150 (MQ=255)
                                                                                                           ccACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtct                                             >  2:608397‑M2/1‑44 (MQ=255)
                                                                                                            cacaGCAGCAGCAGATAACGCAAACGTTGCGGCCCTGCAGTCGGAGGCGCCGGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCATCCGGGAAACGACCGCCCAGACCGGAAGTc                                                <  1:775403/147‑1 (MQ=255)
                                                                                                               agcagcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGc                                          >  2:595884/1‑150 (MQ=255)
                                                                                                                gcagcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGcac                                        <  2:188644/151‑1 (MQ=255)
                                                                                                                    cagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgcc                                    <  1:827360‑M2/151‑117 (MQ=255)
                                                                                                                    cagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgcc                                    <  2:14351‑M2/151‑117 (MQ=255)
                                                                                                                      gcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCAcc                                  <  2:922781/151‑1 (MQ=255)
                                                                                                                      gcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCAcc                                  <  2:877751/151‑1 (MQ=255)
                                                                                                                        agATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggcgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattg                                <  2:1064661‑M2/151‑121 (MQ=255)
                                                                                                                        agATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCaa                                <  2:752972/151‑1 (MQ=255)
                                                                                                                        agATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCa                                 >  2:575911/1‑150 (MQ=255)
                                                                                                                          aTAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAaca                              <  2:53176/151‑1 (MQ=255)
                                                                                                                                 aaaCGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatc                        <  1:439144‑M2/150‑129 (MQ=255)
                                                                                                                                  aaCGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcac                      <  2:231184‑M2/151‑131 (MQ=255)
                                                                                                                                  aaCGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcac                      >  2:1094233‑M2/1‑21 (MQ=255)
                                                                                                                                    cGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGTTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCACCACGAATATCCg                    <  1:1098537/151‑1 (MQ=255)
                                                                                                                                       tGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTAt                 >  2:1052435/1‑151 (MQ=255)
                                                                                                                                        gCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTAtt                <  1:653210/151‑1 (MQ=255)
                                                                                                                                        gCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTAt                 <  2:1056239/150‑1 (MQ=255)
                                                                                                                                         cAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaact                 >  1:472124‑M2/1‑14 (MQ=255)
                                                                                                                                           gCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgc             <  2:248557‑M2/151‑140 (MQ=255)
                                                                                                                                            cccTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGcc            >  2:948288/1‑151 (MQ=255)
                                                                                                                                             ccTGCAGGCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcgtcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccg           >  1:396655‑M2/1‑10 (MQ=255)
                                                                                                                                             ccTGCAGCAGGACGCGCCTCTATCACAGTATAAGCGCGCTGGGCCTCGAGTTTTACGGAAGCGACCACCGCGACAGCATAGCCTTCCGGGAAACGACCGCCCCCACCAGCAGTCTCCACCACATCACCAACCCGATTATCCCTATTcccc            >  1:1001284/1‑150 (MQ=255)
                                                                                                                                                gCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCaa                                >  2:811235/1‑127 (MQ=255)
                                                                                                                                                gCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCaa                                <  1:810828/127‑1 (MQ=255)
                                                                                                                                                  tgTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGc         >  1:833828/2‑148 (MQ=255)
                                                                                                                                                  aGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGc         >  2:301840/1‑148 (MQ=255)
                                                                                                                                                   gTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccgggttat     <  2:1074092‑M2/151‑148 (MQ=255)
                                                                                                                                                      ggACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCt  >  2:1041907/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCT  >  NC_000913/3399062‑3399362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.