Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,782,626 IS5 (–) +4 bp coding (98‑101/4581 nt) ypjA ← adhesin‑like autotransporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)49 (1.430) 34/298 0.2 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 2782629 0 (0.000)coding (98/4581 nt) ypjA adhesin‑like autotransporter
* ? NC_000913 = 2290113NA (NA)55 (1.610) 48/298 0.0 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 2782626 = 0 (0.000)coding (101/4581 nt) ypjA adhesin‑like autotransporter

Only 100 of 103 total aligned reads displayed.

CACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCT  >  NC_000913/2782480‑2782779
                                                                                                                                                     |                                                                                                                                                      
ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTtagt                                                                                                                                                       >  2:452375‑M2/147‑151 (MQ=255)
 gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTtagt                                                                                                                                                       >  1:397721‑M2/146‑150 (MQ=255)
    aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTg                                                                                                                                                   >  2:31305‑M2/143‑151 (MQ=255)
      gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGa                                                                                                                                                  >  2:135334‑M2/141‑150 (MQ=255)
      aTTAAATAAGGTTTACATTAGATACCCCGCCATGAACATTCTGCTTGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCTCTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaag                                                                                                                                                   >  1:219438‑M2/1‑144 (MQ=255)
       ttCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGgga                                                                                                                                                     >  2:322971‑M2/1‑143 (MQ=255)
       ttCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGgga                                                                                                                                                     <  1:322882‑M2/146‑4 (MQ=255)
          aaTAAGTTTCCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcga                                                                                                                                             >  1:82034‑M2/1‑140 (MQ=255)
          aaTAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcg                                                                                                                                              >  1:507864‑M2/1‑140 (MQ=255)
          aaTAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgc                                                                                                                                               >  2:378858‑M2/1‑140 (MQ=255)
          aaTAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtg                                                                                                                                                >  1:102683‑M2/1‑140 (MQ=255)
            ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGc                                                                                                                                           >  2:269701‑M2/135‑151 (MQ=255)
             aagctttccattAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaata                                                                                                                                          >  2:18427‑M2/6‑137 (MQ=255)
              cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGcc                                                                                                                                          >  1:118777‑M2/133‑150 (MQ=255)
                aCTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagc                                                                                                                                       <  1:411292‑M2/151‑18 (MQ=255)
                aCTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagc                                                                                                                                       <  2:486795‑M2/151‑18 (MQ=255)
                 ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATcc                                                                                                                                      >  1:276167‑M2/130‑151 (MQ=255)
                    ccATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggg                                                                                                                                    >  2:382233‑M2/1‑130 (MQ=255)
                     ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcg                                                                                                                                    <  2:144636‑M2/24‑1 (MQ=255)
                     cATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTCGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcgggg                                                                                                                                   <  2:182651‑M2/150‑22 (MQ=255)
                      gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcgggc                                                                                                                                 <  1:498091‑M2/27‑1 (MQ=255)
                       ttAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaa                                                                                                                                 <  2:8596‑M2/150‑24 (MQ=255)
                          gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCcgggcgg                                                                                                                               <  2:534090‑M2/29‑1 (MQ=255)
                          gATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaat                                                                                                                               >  1:518874‑M2/1‑124 (MQ=255)
                            cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGc                                                                                                                            <  2:6554‑M2/32‑1 (MQ=255)
                             ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCat                                                                                                                          >  1:173562‑M2/118‑151 (MQ=255)
                             aCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttc                                                                                                                          <  2:380076‑M2/151‑31 (MQ=255)
                               cccGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctc                                                                                                                        <  1:247759‑M2/151‑33 (MQ=255)
                                  ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATc                                                                                                                     >  1:439446‑M2/113‑151 (MQ=255)
                                   tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATc                                                                                                                     <  2:222593‑M2/39‑1 (MQ=255)
                                   tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATc                                                                                                                     >  2:232803‑M2/112‑150 (MQ=255)
                                     aTGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTATTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   <  2:454915‑M2/150‑38 (MQ=255)
                                         aCATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               <  1:332663‑M2/150‑42 (MQ=255)
                                          gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCa                                                                                                               <  1:422125‑M2/45‑1 (MQ=255)
                                           aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGat                                                                                                            <  1:385162‑M2/48‑1 (MQ=255)
                                           aTTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                            <  2:443449‑M2/151‑45 (MQ=255)
                                            attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGat                                                                                                            >  2:493150‑M2/103‑150 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATc                                                                                                         >  2:42741‑M2/100‑150 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCa                                                                                                        <  2:339675‑M2/52‑1 (MQ=255)
                                                   gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGTGGGGCATATATCAAGGCAGATATCAATa                                                                                                     <  2:118812‑M2/55‑1 (MQ=255)
                                                       gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGa                                                                                                 >  2:470123‑M2/92‑150 (MQ=255)
                                                       aTGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                                <  1:202227‑M2/151‑57 (MQ=255)
                                                         ggTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                              >  2:405813‑M2/1‑93 (MQ=255)
                                                            ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTAc                                                                                           >  1:393648‑M2/87‑151 (MQ=255)
                                                              taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTg                                                                                         >  1:368112‑M2/85‑151 (MQ=255)
                                                              ataataTGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                          >  1:324851‑M2/1‑88 (MQ=255)
                                                                 gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgc                                                                                      <  1:516124‑M2/70‑1 (MQ=255)
                                                                   atGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     >  2:170188‑M2/1‑83 (MQ=255)
                                                                    gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggc                                                                                   >  1:256121‑M2/79‑151 (MQ=255)
                                                                      tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggcg                                                                                  >  2:424680‑M2/77‑150 (MQ=255)
                                                                      aGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                                 >  1:133889‑M2/1‑80 (MQ=255)
                                                                       gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGAc                                                                                >  1:55750‑M2/76‑151 (MQ=255)
                                                                          ttATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             <  1:64975‑M2/151‑76 (MQ=255)
                                                                           catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACaat                                                                             >  2:27356‑M2/72‑150 (MQ=255)
                                                                            atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACaataa                                                                           <  1:66752‑M2/81‑1 (MQ=255)
                                                                               tgttgtACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                        <  2:21770‑M2/151‑81 (MQ=255)
                                                                                     cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTg                                                                  >  2:85332‑M2/62‑151 (MQ=255)
                                                                                      ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTgg                                                                 >  1:344385‑M2/61‑151 (MQ=255)
                                                                                        gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTgg                                                                 <  1:188256‑M2/91‑1 (MQ=255)
                                                                                         cGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                              <  1:299629‑M2/151‑91 (MQ=255)
                                                                                          tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCt                                                             >  2:314419‑M2/57‑151 (MQ=255)
                                                                                          tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCt                                                             >  1:264497‑M2/57‑151 (MQ=255)
                                                                                           ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCt                                                             >  1:473816‑M2/56‑150 (MQ=255)
                                                                                           ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTg                                                            >  1:493329‑M2/56‑151 (MQ=255)
                                                                                                gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcaTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCAt                                                       >  1:369823‑M2/51‑151 (MQ=255)
                                                                                                ccACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                       <  2:106032‑M2/151‑98 (MQ=255)
                                                                                                   ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATaa                                                     >  1:153739‑M2/48‑150 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAAtt                                                  >  2:202375‑M2/46‑151 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAAtt                                                  <  1:446673‑M2/106‑1 (MQ=255)
                                                                                                          acaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATc                                             >  2:325459‑M2/41‑151 (MQ=255)
                                                                                                             gCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                           >  1:389273‑M2/1‑41 (MQ=255)
                                                                                                             gCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                           >  1:243918‑M2/1‑41 (MQ=255)
                                                                                                               catgatctcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTg                                        <  1:227862‑M2/116‑1 (MQ=255)
                                                                                                                      tcatatcagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTg                                 >  1:301483‑M2/29‑151 (MQ=255)
                                                                                                                      aGTCTCATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                                 >  1:49473‑M2/1‑32 (MQ=255)
                                                                                                                          tcATCGTTTACCACACCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                             <  1:103849‑M2/151‑124 (MQ=255)
                                                                                                                            cagggacttgttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACt                           >  2:219277‑M2/23‑151 (MQ=255)
                                                                                                                               gTTTACCACACCAATAACATTAGggaaggtgcgaataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        >  1:532089‑M2/1‑23 (MQ=255)
                                                                                                                                     gttcgcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCg                   <  1:23417‑M2/137‑1 (MQ=255)
                                                                                                                                       cacCAATAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta                >  2:199987‑M2/1‑15 (MQ=255)
                                                                                                                                         gcaccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTaa              <  2:153780‑M2/142‑1 (MQ=255)
                                                                                                                                          caccttccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTa               >  2:24542‑M2/9‑149 (MQ=255)
                                                                                                                                           aaTAACATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc            <  2:214792‑M2/151‑141 (MQ=255)
                                                                                                                                                ccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGa          <  1:202311‑M2/146‑1 (MQ=255)
                                                                                                                                                ccTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGAcc        <  1:129623‑M2/148‑1 (MQ=255)
                                                                                                                                                 cTTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCtt      >  2:308015‑M2/2‑151 (MQ=255)
                                                                                                                                                 aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  2:130148‑M2/1‑5 (MQ=255)
                                                                                                                                                 aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  1:8595‑M2/1‑5 (MQ=255)
                                                                                                                                                 aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  2:527199‑M2/151‑147 (MQ=255)
                                                                                                                                                  ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt       >  2:537312‑M2/1‑4 (MQ=255)
                                                                                                                                                  ttAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCtt      >  1:36744/1‑150 (MQ=255)
                                                                                                                                                   tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:367077‑M2/151‑149 (MQ=255)
                                                                                                                                                   tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  1:503128‑M2/1‑3 (MQ=255)
                                                                                                                                                    agtagtGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAg    <  1:99398/150‑1 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   >  2:64930‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:450165‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:62083‑M2/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:136600‑M2/150‑149 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  >  2:113657‑M2/1‑1 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  >  1:152543‑M2/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAATAATAGGGACTGGTCCTGTTCATAAATTTCATCCTCTGAAAAGTGAATACTGAGTAGCGTTTAAGCGACCTTAGCT  >  NC_000913/2782480‑2782779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.