Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,377,491 IS2 (+) +5 bp intergenic (‑71/+320) sspA ← / ← rpsI stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)70 (1.070) 59/294 0.2 98.5% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 3377495 1 (0.020)intergenic (‑75/+320) sspA/rpsI stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9
* ? NC_000913 = 3187426NA (NA)70 (1.070) 59/296 0.2 98.5% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 3377491 = 1 (0.020)intergenic (‑71/+324) sspA/rpsI stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9

Only 100 of 142 total aligned reads displayed.

CGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTA  >  NC_000913/3377344‑3377640
                                                                                                                                                   |                                                                                                                                                     
aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCa                                                                                                                                                    <  2:4448‑M2/4‑1 (MQ=255)
  gACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAt                                                                                                                                                  >  1:136177‑M2/1‑150 (MQ=255)
   aCCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAt                                                                                                                                                  <  1:362696‑M2/150‑2 (MQ=255)
       gATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtaga                                                                                                                                               >  1:187793‑M2/1‑145 (MQ=255)
        aTGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactg                                                                                                                                            <  1:289027‑M2/151‑8 (MQ=255)
          ggCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactg                                                                                                                                            >  1:662197‑M2/1‑142 (MQ=255)
          gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAAc                                                                                                                                           <  2:688225‑M2/13‑1 (MQ=255)
          gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAAc                                                                                                                                           <  1:754544‑M2/13‑1 (MQ=255)
             tataGATGTCAGTAGGACCGGAAAACAGAGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCGACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggcccc                                                                                                                                       <  1:977317‑M2/151‑13 (MQ=255)
             gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGAct                                                                                                                                       >  1:88200‑M2/135‑151 (MQ=255)
              ataGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccc                                                                                                                                      <  2:858769‑M2/151‑14 (MQ=255)
              aggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGActc                                                                                                                                      <  1:843324‑M2/18‑1 (MQ=255)
                  gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCtt                                                                                                                                  <  1:871065‑M2/22‑1 (MQ=255)
                      gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGtt                                                                                                                              <  1:331094‑M2/26‑1 (MQ=255)
                         cattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCg                                                                                                                            >  1:768532‑M2/123‑150 (MQ=255)
                          aGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGa                                                                                                                           <  2:406563/150‑1 (MQ=255)
                              ccGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaac                                                                                                                      >  2:119464‑M2/1‑122 (MQ=255)
                               cGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaacc                                                                                                                     <  2:312962‑M2/151‑31 (MQ=255)
                                ggAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaacca                                                                                                                    >  2:165800‑M2/1‑120 (MQ=255)
                                ggAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaacca                                                                                                                    >  2:852059‑M2/1‑120 (MQ=255)
                                  gaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATcaaac                                                                                                                  <  2:377541‑M2/38‑1 (MQ=255)
                                    atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATcaaaca                                                                                                                 >  2:534764‑M2/112‑150 (MQ=255)
                                        catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACCCTCTTTGTTCGAAAATCAAACaaaaa                                                                                                             >  1:905322‑M2/108‑150 (MQ=255)
                                         atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAAt                                                                                                           <  2:333301‑M2/45‑1 (MQ=255)
                                            cATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaa                                                                                                         >  2:93210‑M2/1‑108 (MQ=255)
                                             gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGc                                                                                                       >  2:949752‑M2/103‑151 (MQ=255)
                                             gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagacgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGc                                                                                                       >  2:167021‑M2/103‑151 (MQ=255)
                                                 ccGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                                                                   <  2:470164‑M2/151‑49 (MQ=255)
                                                     cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCg                                                                                               <  2:521040‑M2/57‑1 (MQ=255)
                                                           gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATCAGCAATACCCGACAttt                                                                                         <  1:88148‑M2/63‑1 (MQ=255)
                                                            ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTg                                                                                        >  2:408390‑M2/88‑151 (MQ=255)
                                                               tcgcgcgccacgggaatatctgcggcagctggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGTCTCTCTTTGTTCGAAAATCAAACAGAAAATGTGCAATGCCCGACATTTgg                                                                                       <  1:361831‑M2/65‑1 (MQ=255)
                                                                   cGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                                                                                 >  2:1009091‑M2/1‑85 (MQ=255)
                                                                    gACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt                                                                                <  2:1021969‑M2/151‑68 (MQ=255)
                                                                     gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGaaaa                                                                               <  1:591006‑M2/73‑1 (MQ=255)
                                                                     aCAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                                                                               >  1:222258‑M2/1‑83 (MQ=255)
                                                                           ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGgat                                                                         >  1:194042‑M2/73‑151 (MQ=255)
                                                                               tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGgatgat                                                                      >  2:652578‑M2/69‑150 (MQ=255)
                                                                               tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGgatgat                                                                      >  1:582205‑M2/69‑150 (MQ=255)
                                                                               aaaCCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                                                                     <  2:77312‑M2/151‑79 (MQ=255)
                                                                                 tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGt                                                                   >  2:740982‑M2/67‑151 (MQ=255)
                                                                                    gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGt                                                                   <  2:247826‑M2/85‑1 (MQ=255)
                                                                                     ccAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                                                               >  1:394487‑M2/1‑67 (MQ=255)
                                                                                       gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCa                                                             <  2:259603‑M2/91‑1 (MQ=255)
                                                                                        ggTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcatttaaataagtgatagtcttaatactagtttttagactagtcattgg                                                               <  2:249015‑M2/148‑85 (MQ=255)
                                                                                        ggTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga                                                            >  1:293735‑M2/1‑64 (MQ=255)
                                                                                          gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTAcc                                                              >  1:236945‑M2/58‑147 (MQ=255)
                                                                                           ataGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca                                                         >  1:391763‑M2/1‑61 (MQ=255)
                                                                                           ataGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac                                                          <  2:949435‑M2/150‑90 (MQ=255)
                                                                                            gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGAttt                                                        >  1:926460‑M2/56‑151 (MQ=255)
                                                                                            gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGAttt                                                        >  1:513018‑M2/56‑151 (MQ=255)
                                                                                             ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGAtttt                                                       >  1:62279‑M2/55‑151 (MQ=255)
                                                                                             aGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag                                                        >  2:602784‑M2/1‑59 (MQ=255)
                                                                                              gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGAtttt                                                       >  1:383721‑M2/54‑150 (MQ=255)
                                                                                                 aGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgat                                                   <  2:826718‑M2/151‑97 (MQ=255)
                                                                                                  gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGa                                                   <  2:45221‑M2/101‑1 (MQ=255)
                                                                                                    aatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGAcc                                                 <  2:94533‑M2/103‑1 (MQ=255)
                                                                                                    aatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGAcc                                                 >  1:34048‑M2/48‑150 (MQ=255)
                                                                                                    aatgggttaagtgataacagatgtctggaaatataggggaaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATTCCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGAcc                                                 <  1:539020‑M2/103‑1 (MQ=255)
                                                                                                    aTTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                                 <  2:489371‑M2/150‑99 (MQ=255)
                                                                                                    aTTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg                                                 <  1:556491‑M2/150‑99 (MQ=255)
                                                                                                       tttACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgt                                             <  1:1005942‑M2/151‑103 (MQ=255)
                                                                                                        ttACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtc                                            <  1:116845‑M2/151‑104 (MQ=255)
                                                                                                         tACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtc                                            >  2:678656‑M2/1‑47 (MQ=255)
                                                                                                         gttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATtgtg                                           <  1:982478‑M2/109‑1 (MQ=255)
                                                                                                         gttaagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATtgtg                                           >  2:180172‑M2/43‑151 (MQ=255)
                                                                                                           taagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTgtgg                                          <  1:996360‑M2/110‑1 (MQ=255)
                                                                                                            tGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                          <  2:478281‑M2/149‑106 (MQ=255)
                                                                                                            aagtgataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTgtggtg                                        >  2:84195‑M2/40‑151 (MQ=255)
                                                                                                             gCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg                                       <  2:556051‑M2/151‑109 (MQ=255)
                                                                                                                gataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGt                                     <  2:699482‑M2/115‑1 (MQ=255)
                                                                                                                gataacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGt                                     <  2:684134‑M2/115‑1 (MQ=255)
                                                                                                                  cAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg                                  <  2:36318‑M2/151‑114 (MQ=255)
                                                                                                                   aacagatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGAt                                 >  1:158912‑M2/33‑151 (MQ=255)
                                                                                                                    gCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggag                                >  2:72564‑M2/1‑36 (MQ=255)
                                                                                                                     ccaccaGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga                               >  1:550498‑M2/1‑35 (MQ=255)
                                                                                                                     ccaccaGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg                                  <  1:209618‑M2/148‑114 (MQ=255)
                                                                                                                      caccaGGTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga                               <  2:437607‑M2/150‑117 (MQ=255)
                                                                                                                      agatgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGcc                              >  2:136433‑M2/30‑151 (MQ=255)
                                                                                                                        atgtctggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCgg                            >  2:444029‑M2/28‑151 (MQ=255)
                                                                                                                            gTGGCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcag                        >  1:431211‑M2/1‑28 (MQ=255)
                                                                                                                              ggaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATg                       <  2:631357‑M2/129‑1 (MQ=255)
                                                                                                                              ggCCAGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataggcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcaga                       >  1:828577‑M2/1‑26 (MQ=255)
                                                                                                                               gaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATggg                     <  2:88237‑M2/131‑1 (MQ=255)
                                                                                                                               gaaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATggg                     >  1:673728‑M2/21‑151 (MQ=255)
                                                                                                                                aaatataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATgggg                    <  2:1035277‑M2/132‑1 (MQ=255)
                                                                                                                                  aGTCAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcg                  <  2:224017‑M2/151‑130 (MQ=255)
                                                                                                                                    ataggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGaaa                 <  2:226897‑M2/135‑1 (MQ=255)
                                                                                                                                     taggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGaaaa                >  1:1019021‑M2/15‑150 (MQ=255)
                                                                                                                                     cAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac               <  1:579856‑M2/151‑133 (MQ=255)
                                                                                                                                     cAGAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac               <  2:420593‑M2/151‑133 (MQ=255)
                                                                                                                                      aggggcaaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGaaaa                >  2:611230‑M2/14‑149 (MQ=255)
                                                                                                                                       gAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacc              <  2:532719‑M2/150‑134 (MQ=255)
                                                                                                                                       gAAGTTGTGTTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacc              <  1:900510‑M2/150‑134 (MQ=255)
                                                                                                                                           caaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATg         <  2:766441‑M2/143‑1 (MQ=255)
                                                                                                                                            aaatccaCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATg         >  2:787462‑M2/8‑150 (MQ=255)
                                                                                                                                             gtgtTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg       >  1:612903‑M2/1‑11 (MQ=255)
                                                                                                                                             gtgtTACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg       >  2:388227‑M2/1‑11 (MQ=255)
                                                                                                                                                ttACCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa     <  1:755742‑M2/150‑143 (MQ=255)
                                                                                                                                                  aCCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTa  <  2:677877‑M2/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAACAAAAAATGAGCAATACCCGACATTTGGGCAGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTA  >  NC_000913/3377344‑3377640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.