New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1231441 = | 174 (0.780) | 5 (0.020) | 5/434 | 14.1 | 3.0% | coding (256/1269 nt) | umuC | translesion error‑prone DNA polymerase V subunit; DNA polymerase activity |
? | NC_000913 | 1231473 = | 155 (0.720) | coding (288/1269 nt) | umuC | translesion error‑prone DNA polymerase V subunit; DNA polymerase activity | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below cutoff threshold. |
GTTCCAGATTTGATAAATCCACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1231696‑1231441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcgaGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCT > NC_000913/1231473‑1231721 GTTCCAGATTTGATAAATCCACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGCTCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGC > 1:1337900/1‑251 TCCAGATTTGATAAATCCACCCCCCCACCCGTCTGCCGCTGCCAATTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGT < 2:476353/251‑1 TCCAGATTTGATAAATCCACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGT < 2:1301627/251‑1 TCCAGATTTGATAAATCCACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGT < 2:1338022/251‑1 ACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGTCGAGATTTACAGTATTGA < 2:1254134/251‑1 GCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGCTCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCACAATCAGTCAGATCGCGCCCATTACGCACACCTGTCAGCTCTCAGACTCCCACATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCACCGACCAGATTTACAGTATTGATGCGGCAGTCTGCGCTATGACc > 1:618477/1‑250 CGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCACAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCACAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGACAGCTCTTCCAGCGTCGAGCTTTACAGTATCGATGAGGCATTCTGCGATCTGCCAGGGGGGCGTAATT > 1:2081166/1‑251 TGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCCAAATCAGTCAGATCGCGACGATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGACGATAGCTCTTCCAGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCG < 2:2081371/251‑1 TTTTGGTCTGGGCCACCCCCACCCCAACAGAAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCGCGACGCGGGGCGATAGCTCTTCCAGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGA < 2:618536/251‑1 TCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTTCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATATCTCTTCCAGCGT < 1:1426316/157‑1 TTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGT < 2:1445485/129‑1 TCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCT < 2:289688/251‑1 GAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCT > 2:552554/1‑251 GTTCCAGATTTGATAAATCCACCACCCCACCCGTCTGCCGCTGCCATTTTTTTGCCGCATGATTGGCAAGCTTAGCCAGCGTTTTGGTCTGGGCGATCCCCACACCAACAGTAAGATGGGTACGTTGTAGCACCGTTGCGCGAATTTCTCTGCCAAAATCAGTCAGATCGCGACAATTACGCACACCTGTCAGATCGCAGAATGCCTCATCAATACTGTAAATCTCGACGCGGGGCGATAGCTCTTCCAGCGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1231696‑1231441 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcgaGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCT > NC_000913/1231473‑1231721 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |