New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 1207790 =8 (0.080)52 (0.610) 45/264 1.1 85.9% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_pgi 1209619 = 10 (0.120)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC  >  NC_000913_3_hsa_pgi/1209475‑1209765
                                                                                                                                                |                                                                                                                                                  
aggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggaatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGttt                                                                                                                                                <  1:903858‑M2/5‑1 (MQ=255)
  gcaccttcttttgcggcattgcacgcccactgactgattactgcttgctctataccaccaaacattaccggtatagctatgaaagcggtgagtcgtaatgttggcgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                                                                              <  2:524126‑M2/7‑1 (MQ=255)
     gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctacttctcacaaaccaaCGTTTATGaa                                                                                                                                           >  2:541365‑M2/140‑149 (MQ=255)
      aagatttagcgtcattcaacccgcactgaatgattacttattgctcaatagtaccaatcataacctgtatagctatgaaaccggtgcgtcctaatgtagaagttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaa                                                                                                                                          <  1:935578‑M2/11‑1 (MQ=255)
       tgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                         <  2:1403808‑M2/12‑1 (MQ=255)
        gcttttgcggcattccactcccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                                                                        <  2:799988‑M2/13‑1 (MQ=255)
          ttttgcggcattccaccccaaatgaatgattactgattgctcaataccaacaatcataaccggtatagctatgaaaccggtgcgtcctaatgtatacgttgctgcattgagttttgctccttctaccaaaccatCGTTTATGAAAATga                                                                                                                                      >  2:176582‑M2/135‑149 (MQ=255)
           tttgcggcattccacacccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                                     <  2:1517807‑M2/16‑1 (MQ=255)
              gcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgaattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaagaa                                                                                                                                  >  2:1529367‑M2/131‑149 (MQ=255)
                ggcattccacccccactgaatgattcctgattgcgcaataccaccaatcataaccggtatagcgatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaatccaaCGTTTATGAAAATGAAGAAAt                                                                                                                                <  1:1371463‑M2/21‑1 (MQ=255)
                  cattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATaa                                                                                                                              <  2:1539218‑M2/23‑1 (MQ=255)
                   cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAAc                                                                                                                             <  1:327510/149‑1 (MQ=255)
                   attccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAAc                                                                                                                             <  2:927442‑M2/24‑1 (MQ=255)
                    ttccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACa                                                                                                                            <  1:486476‑M2/25‑1 (MQ=255)
                           ggTATTATTCAGCATAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                                     <  2:1342046/149‑1 (MQ=255)
                           cccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                                     >  1:722894‑M2/118‑149 (MQ=255)
                            ccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                    >  2:732438‑M2/117‑149 (MQ=255)
                            ccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                    >  2:838786‑M2/117‑149 (MQ=255)
                                tgaatgattactgattgctcaataccaccactcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                                >  2:1212968‑M2/113‑149 (MQ=255)
                                tgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                                >  1:1162069‑M2/113‑149 (MQ=255)
                                tgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgaattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                                <  1:383462‑M2/37‑1 (MQ=255)
                                 cttcAGCAGAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCAAATGGcatc                                                                                                               >  1:1180765/1‑149 (MQ=255)
                                    tgatttctgattgctcaataccaccaatcataaccggtatagctatgaagccggtgcgtcctattgtaggcgttgctgcattgagttttgctccttctgccaaaccacCGTTTATGATAATGAAGAAATATCAAGCAAAtgtcatcagt                                                                                                            >  1:1189852‑M2/109‑147 (MQ=255)
                                    tgattactgattgctcaataccacaaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagcagttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                                                                            <  1:295387‑M2/41‑1 (MQ=255)
                                           tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtt                                                                                                     >  2:611322‑M2/102‑149 (MQ=255)
                                             aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACAAACAGGTAATGCAGAGACTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttta                                                                                                   >  1:571031/1‑148 (MQ=255)
                                               gCGGCACCATTGCATTTCAGCCTGCCTGTTGGCGGAGTGGCTGAAGGCCACGGTACCGGGACACCATCAGGTAATGCAGAGCCTTCTCCCAACCCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                                 <  1:1308225/149‑1 (MQ=255)
                                                    aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                            <  1:838786‑M2/57‑1 (MQ=255)
                                                    aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                            <  1:732438‑M2/57‑1 (MQ=255)
                                                    aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccggtgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                            <  2:1476948‑M2/57‑1 (MQ=255)
                                                     ataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                                                                           >  1:970579‑M2/92‑149 (MQ=255)
                                                        ccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgcgccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                        >  2:969190‑M2/89‑149 (MQ=255)
                                                         caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                       >  1:1439274‑M2/88‑149 (MQ=255)
                                                         caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGATTTTACCATGGGGAtt                                                                                       >  2:161861‑M2/88‑149 (MQ=255)
                                                            caatcataaccggtatagctatgaaacaggtgagtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGATATAACAAGCAAATGGAATCATTCCTCCTTTAACCAGGGGGATTTaa                                                                                    >  1:1155974‑M2/85‑149 (MQ=255)
                                                             aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                   >  1:1297275‑M2/84‑149 (MQ=255)
                                                              ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                  <  1:363970/149‑1 (MQ=255)
                                                               tcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctccccaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTATTACCAGCGGGATTTAACAt                                                                                 >  1:845273‑M2/82‑149 (MQ=255)
                                                                 ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                               <  2:1291786‑M2/70‑1 (MQ=255)
                                                                  taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTACTGCTTTTACCAGGGGGATTTAACATGCt                                                                              >  1:269215‑M2/79‑149 (MQ=255)
                                                                  gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTGAACATGcg                                                                              >  1:1386815/1‑148 (MQ=255)
                                                                    accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCCTTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                            >  1:1352644‑M2/77‑149 (MQ=255)
                                                                    accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                            >  1:635432‑M2/77‑149 (MQ=255)
                                                                        gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                        >  1:223273‑M2/73‑149 (MQ=255)
                                                                                  gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                              >  1:516862‑M2/63‑149 (MQ=255)
                                                                                          tgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac                                                      <  1:69199‑M2/95‑1 (MQ=255)
                                                                                            cgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaacaa                                                    <  1:711967‑M2/97‑1 (MQ=255)
                                                                                              tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                  <  2:722894‑M2/99‑1 (MQ=255)
                                                                                                 taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACTCGTATCAACAAATGAc                                               <  1:611322‑M2/102‑1 (MQ=255)
                                                                                                   atgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                                             <  2:1162069‑M2/104‑1 (MQ=255)
                                                                                                    tgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGTTTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAg                                            >  1:680226‑M2/45‑149 (MQ=255)
                                                                                                      tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATATCAAGCAAATGGCATCTTTCCTGCTTTTAGCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                          >  1:602366‑M2/43‑149 (MQ=255)
                                                                                                         ccgttgctgcattgagttttgttccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCATGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAATGACCAGaacaa                                       >  1:1104907‑M2/40‑148 (MQ=255)
                                                                                                            ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGa                                    >  1:811984‑M2/37‑149 (MQ=255)
                                                                                                             tgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGGAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                                   <  1:1529367‑M2/114‑1 (MQ=255)
                                                                                                               cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                                 >  1:806172/1‑149 (MQ=255)
                                                                                                                 gcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATTACAAGCAAATGGCATCATTCCTGCTTTTACCCGGGGGTTTTAACATGCTTATTGGCTATGTACGCGTATCACCAAATGACCAGAACACCGATCTAc                               >  2:960398‑M2/32‑149 (MQ=255)
                                                                                                                    ttgagttttgctccttctccccaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                            >  2:309478‑M2/29‑149 (MQ=255)
                                                                                                                    ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                            >  1:232780‑M2/29‑149 (MQ=255)
                                                                                                                     gTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTATTACCAGGGGGATTTATCATGCTTATTGGCGATGTACGAGTATCAGCAAAGGACCAGAACACAGATCTACaagg                           >  2:677447/1‑147 (MQ=255)
                                                                                                                             gctccttctcccaaaccaaCGTTTATGATAATGAAGAAATAACAAGCAAATGGCATCATTCATGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTTTCAACAAATGACCAGAACTCAGATCTACAACGTATTgcgc                   >  1:194285‑M2/20‑149 (MQ=255)
                                                                                                                             gcgCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAATATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcgc                   <  1:969190/147‑1 (MQ=255)
                                                                                                                                  ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc              >  2:124765‑M2/15‑149 (MQ=255)
                                                                                                                                    ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtg            >  1:730515‑M2/13‑149 (MQ=255)
                                                                                                                                    cacccAAACCAACGTATATGAAAATCAAGAAATAACAAGCAAATGGCATCATTCATACTTTTACAAGTGGGATTTAACATGCTTATTTGCTATGTACGCGAATCAACAAATGAACAGAACACAGATCTACAACGTAATGCTCTGAACtg            >  1:1098779/3‑149 (MQ=255)
                                                                                                                                       ccaaacccaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTATTGCGCTGAACTGTGc         >  1:202580‑M2/10‑149 (MQ=255)
                                                                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGCTCTACAACGTAATGCGCTGAACTGTGc         >  2:540237‑M2/10‑149 (MQ=255)
                                                                                                                                        caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa        >  1:221532‑M2/9‑149 (MQ=255)
                                                                                                                                        caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa        >  2:533899‑M2/9‑149 (MQ=255)
                                                                                                                                         aaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAg       >  1:675806‑M2/8‑149 (MQ=255)
                                                                                                                                           accaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGa     >  1:1518308‑M2/6‑149 (MQ=255)
                                                                                                                                             caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATg   >  2:1345730‑M2/4‑149 (MQ=255)
                                                                                                                                              aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGc  <  1:1538069‑M2/147‑1 (MQ=255)
                                                                                                                                              aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGATGAACTGTGCAGGATGc  >  1:1549873‑M2/3‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
TTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC  >  NC_000913_3_hsa_pgi/1209475‑1209765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.