New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 1961815 =100 (0.990)14 (0.150) 10/276 8.6 12.8% intergenic (+20/‑157) argS/yecT arginyl‑tRNA synthetase/uncharacterized protein
?NC_000913_3_hsa_pgi 1961845 = 97 (1.030)intergenic (+50/‑127) argS/yecT arginyl‑tRNA synthetase/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

CTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGA  >  NC_000913_3_hsa_pgi/1961669‑1961963
                                                                                                                                                  |                                                                                                                                                    
cTGCCCGATCCTCTGCTCAGAAAACGCAGAAGTGCGGAAGAGCCGTCTAAATCTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGT‑ATCGATTTTTCGTGAGAGTGAAGc                                                                                                                                                   <  2:1308025/149‑1 (MQ=255)
cTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACAGTAGCGCGTATGTAATCGATTTTTCGTGAGAGTGaac                                                                                                                                                    >  2:298650/1‑148 (MQ=255)
cTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCAGGATACGCTGGGTATGGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTTAAg                                                                                                                                                    >  2:1448988/1‑149 (MQ=255)
 tGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGc                                                                                                                                                   >  2:1266992/1‑149 (MQ=255)
 tGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGGCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGc                                                                                                                                                   <  2:141938/149‑1 (MQ=255)
   cccGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCCCACCTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCt                                                                                                                                                 >  2:1347596/1‑149 (MQ=255)
   cccGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCt                                                                                                                                                 >  2:1083733/1‑149 (MQ=255)
           tCAGCGCAGAATACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAggg                                                                                                                                         >  2:380669/1‑149 (MQ=255)
           tCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAggg                                                                                                                                         >  2:398956/1‑149 (MQ=255)
           tCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAggg                                                                                                                                         >  1:233245/1‑149 (MQ=255)
           tCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAggg                                                                                                                                         >  2:365479/1‑149 (MQ=255)
            cAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATcggcta                                                                                                                                        >  1:1195129/1‑144 (MQ=255)
            cAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGt                                                                                                                                        >  1:1374203/1‑149 (MQ=255)
                gcAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGc                                                                                                                                    <  1:324939/149‑1 (MQ=255)
                  aGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCg                                                                                                                                  >  2:553326/1‑149 (MQ=255)
                  aGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTCAAGCTGGGTCTGGATACGCTGGGGATTGAGACTGTAGAGCGTATGTAATCGAGTTTTCGTGAGAGTGATGCCTGATCAGGGTTAGCCg                                                                                                                                  >  1:87268/1‑149 (MQ=255)
                   taaaaCGAACAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGGGAAGCCTGATCAGGGTTAGCCGa                                                                                                                                 <  1:1222320/148‑1 (MQ=255)
                    aaaaCGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGCAGCCTGATCAGGGTTAGCCGAt                                                                                                                                >  2:910579/1‑149 (MQ=255)
                        cGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAgg                                                                                                                            <  1:1258345/149‑1 (MQ=255)
                         gaagaaGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGc                                                                                                                           >  2:1516663/1‑149 (MQ=255)
                         gaagaaGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGc                                                                                                                           >  1:38523/1‑149 (MQ=255)
                                 gCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTAt                                                                                                                   >  2:774540/1‑149 (MQ=255)
                                          ccGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTa                                                                                                          >  2:638648/1‑149 (MQ=255)
                                             gcTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAAt                                                                                                       <  2:1396758/148‑1 (MQ=255)
                                               tAAAACTGGCACAACTGCCGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATAGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGt                                                                                                     >  2:1004110/1‑149 (MQ=255)
                                                aaaaCTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTa                                                                                                    >  1:858150/1‑149 (MQ=255)
                                                aaaaCTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTa                                                                                                    >  1:476462/1‑149 (MQ=255)
                                                aaaaCTGGCACAACGGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATAGAGACTGTAGAGCGTATGTAATCGAGTTTTCGTGAGAGTGAAGCCAGATCAGGGTAAGCCGATCAGGCTTTTTTATTGCCATCAAAAGGtt                                                                                                    >  2:1606539/1‑148 (MQ=255)
                                                 aaaCTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGAATTGAGACTGTAGAGCGTAGGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTAt                                                                                                   >  2:236996/1‑149 (MQ=255)
                                                    cTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCt                                                                                                <  2:1374203/149‑1 (MQ=255)
                                                     tGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGTTACGCTGGGTATTGAGACGGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTg                                                                                               >  2:1482006/1‑149 (MQ=255)
                                                         acaACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa                                                                                           >  2:1556004/1‑149 (MQ=255)
                                                         acaACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa                                                                                           >  2:386054/1‑149 (MQ=255)
                                                         acaACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa                                                                                           >  1:575191/1‑149 (MQ=255)
                                                         acaACTGACGGCGAAGAAGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa                                                                                           >  1:507440/1‑149 (MQ=255)
                                                           aaCTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATg                                                                                         >  2:388683/1‑149 (MQ=255)
                                                            aCTGACGGCGAAGACGCTGAAGCTGTGTCTGGATTCGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATgg                                                                                        <  1:1040869/149‑1 (MQ=255)
                                                             cggACGGCGAAGACGCGGCAGCGGGGTCGGGATACCCTGGGAATTTAGACTGTAGCGCGTATGTAATCGAATTTTCGTCAGAGTGAAGCCTGCTCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAACTGTATTCTGAAAATGGa                                                                                       <  2:340711/147‑1 (MQ=255)
                                                              tGACGGCGATGACGCTCAAGCTGGGTCTGGATAAGATTGGTATTGAGACAGTAGAGCGTATGTAATCGATTTTTCTTGAGAGTGAACACTGATCAGGTTTAGCCGATCAGGCTTTTTTATTTCCATCTAAATATATTCTGAAAATGGAc                                                                                      >  2:1231365/1‑149 (MQ=255)
                                                              tGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGAc                                                                                      >  1:1352014/1‑149 (MQ=255)
                                                               taCGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACa                                                                                     <  2:31140/148‑1 (MQ=255)
                                                                 cGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATg                                                                                   <  1:638648/149‑1 (MQ=255)
                                                                  ggCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGc                                                                                  <  1:1266992/149‑1 (MQ=255)
                                                                     gAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCAt                                                                               >  1:553220/1‑149 (MQ=255)
                                                                      aaGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCAtt                                                                              <  2:233245/149‑1 (MQ=255)
                                                                        gACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGt                                                                            <  1:594538/149‑1 (MQ=255)
                                                                         aCGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTTTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTTAAAATGGACATGCCATTGtt                                                                           <  1:380669/149‑1 (MQ=255)
                                                                           gCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtttt                                                                         <  1:1175356/149‑1 (MQ=255)
                                                                           gCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtttt                                                                         <  2:705831/149‑1 (MQ=255)
                                                                           gCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtttt                                                                         >  1:541667/1‑149 (MQ=255)
                                                                            cTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTtc                                                                        <  1:1347596/149‑1 (MQ=255)
                                                                              gAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTtctc                                                                      >  2:357205/1‑149 (MQ=255)
                                                                              gAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGAACAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTtctc                                                                      >  1:1478562/1‑149 (MQ=255)
                                                                                 gCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACt                                                                   >  1:183327/1‑149 (MQ=255)
                                                                                    gggTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGtt                                                                <  1:274554/149‑1 (MQ=255)
                                                                                           gATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATg                                                                                         >  1:459226/1‑117 (MQ=255)
                                                                                           gATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATg                                                                                         <  2:459226/117‑1 (MQ=255)
                                                                                           gATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAag                                                         >  1:218984/1‑149 (MQ=255)
                                                                                            aTACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAaga                                                        >  1:877626/1‑149 (MQ=255)
                                                                                            aTACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAaga                                                        <  1:1083733/149‑1 (MQ=255)
                                                                                               cGCTGTGTATTGTTACTGTAGAGCGTTTGTATTCGATTTTTCGTGAGAGTGAAGCCTCATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAACTGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGc                                                     <  2:1097062/149‑1 (MQ=255)
                                                                                               cGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGc                                                     >  1:1579934/1‑149 (MQ=255)
                                                                                                gCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGcc                                                    >  2:96736/1‑149 (MQ=255)
                                                                                                 cTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGACATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCa                                                   >  1:180669/1‑149 (MQ=255)
                                                                                                    ggTATTGAGACAGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGCACAGCCCATTGTTTTCTCACTGTTGGTTAAGAGGCCAGaa                                                >  2:316380/1‑149 (MQ=255)
                                                                                                      tATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGc                                              <  1:553326/149‑1 (MQ=255)
                                                                                                      tATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGc                                              >  1:330394/1‑149 (MQ=255)
                                                                                                       aTTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCg                                             >  1:689241/1‑149 (MQ=255)
                                                                                                        ttGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGAGt                                            <  2:218984/149‑1 (MQ=255)
                                                                                                          gagaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTaa                                          >  2:1207183/1‑149 (MQ=255)
                                                                                                           agaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAat                                         >  2:1608518/1‑149 (MQ=255)
                                                                                                           agaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAat                                         >  1:1115318/1‑149 (MQ=255)
                                                                                                             aCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGGTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAatat                                       >  2:1013127/1‑149 (MQ=255)
                                                                                                              cTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATc                                      <  2:575191/149‑1 (MQ=255)
                                                                                                                    agCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTTATTGATAAGAGGACAGAATAGTAATATCCTGcaa                                >  1:272306/1‑147 (MQ=255)
                                                                                                                       gTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGTCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAg                             <  1:1448988/149‑1 (MQ=255)
                                                                                                                       gTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAg                             <  1:298650/149‑1 (MQ=255)
                                                                                                                        taagTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGTGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAgg                            <  1:236996/146‑1 (MQ=255)
                                                                                                                        tATGTTATCGATTTTTCGTGAGAGGGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAgg                            <  1:1004110/149‑1 (MQ=255)
                                                                                                                            tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGaaa                        <  2:553220/149‑1 (MQ=255)
                                                                                                                            tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGaaa                        <  2:858150/149‑1 (MQ=255)
                                                                                                                            tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGaaa                        <  2:476462/149‑1 (MQ=255)
                                                                                                                            tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGaaa                        <  1:1207183/149‑1 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAATCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACg                      <  1:953685/149‑1 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGTCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCAAGGGAAACg                      >  1:534748/1‑149 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACg                      >  1:735301/1‑149 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACg                      >  2:916800/1‑149 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACg                      >  2:1575844/1‑149 (MQ=255)
                                                                                                                              aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACg                      >  1:296084/1‑149 (MQ=255)
                                                                                                                               tCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGATGCGTAATATCCGGCCCCAGGGAAACGa                     <  1:365479/149‑1 (MQ=255)
                                                                                                                               tCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGa                     >  2:1307985/1‑149 (MQ=255)
                                                                                                                               tCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGa                     <  2:1552026/149‑1 (MQ=255)
                                                                                                                                   tttttCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAAc                 <  1:398956/149‑1 (MQ=255)
                                                                                                                                   tttttCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAAc                 <  1:774540/149‑1 (MQ=255)
                                                                                                                                   tttttCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAAc                 >  2:1376721/1‑149 (MQ=255)
                                                                                                                                    ttttCGTGAGAGGGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACg                <  2:735301/149‑1 (MQ=255)
                                                                                                                                            agagTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTATTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAAtt        >  2:1024757/1‑149 (MQ=255)
                                                                                                                                              agTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTa      <  2:1409594/149‑1 (MQ=255)
                                                                                                                                               gTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTTAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTaa     <  1:1482006/149‑1 (MQ=255)
                                                                                                                                                  aaGCCTGATCAGGGTTAGCCGATCAGGCTGTTTTATTGCCATCTTAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGa  >  1:1134537/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTGGATAAGAGGCCAGAAGCGTAATATCCGGCCCCAGGGAAACGATAACGGTTGAATTTAAGGA  >  NC_000913_3_hsa_pgi/1961669‑1961963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.