| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | = 291401 | NA (NA) | 32 (0.320) | 26/296 | 4.5 | 33.3% | intergenic (‑55/‑3) | insA/yagJ | IS1 repressor TnpA/CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related |
| ? | NC_000913_3_hsa_pgi | 314984 = | 64 (0.630) | pseudogene (628/872 nt) | eaeH | pseudogene, attaching and effacing protein homology;factor; Not classified | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 101 total aligned reads displayed.
TAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCA > NC_000913_3_hsa_pgi/291258‑291549 | tAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAtt > 1:768436/1‑149 (MQ=32) cgcTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTc < 2:213330/149‑1 (MQ=34) cTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAg < 2:953706/149‑1 (MQ=35) tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa < 2:953025/149‑1 (MQ=40) tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa > 1:1211779/1‑149 (MQ=40) tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa > 1:1592645/1‑149 (MQ=40) ggCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAATTCAGTAAGTTGGCAGCATCACCGAATTTTCAGCACGGTTGt > 2:1470800/1‑149 (MQ=255) gCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGtt > 2:300133/1‑149 (MQ=255) cAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGttt < 1:646661/149‑1 (MQ=255) cAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGttt > 2:88849/1‑149 (MQ=255) gTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCa < 2:203864/149‑1 (MQ=255) tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCATCCCGGATGTTTCAc > 1:128055/1‑149 (MQ=255) tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCAc > 1:677082/1‑149 (MQ=255) gCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg > 1:67454/1‑149 (MQ=255) gCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg < 2:501340/149‑1 (MQ=255) cTTTTGCCGTTACGCACCACCCCGTCATTAGCTGAACATGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAATTTTCAGCCCGGATGTTTCACGt < 1:410713/149‑1 (MQ=255) cTTTTGCCGTTACGCACCACACCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCATCCCGGATGTTTccctt > 2:870761/1‑145 (MQ=255) ttttGCCGTAACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa < 2:632978/149‑1 (MQ=255) tttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTAc < 1:1297296/149‑1 (MQ=255) aCGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGa > 1:808663/1‑149 (MQ=255) cGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGaa < 2:1546977/149‑1 (MQ=255) gCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAat > 2:1351622/1‑149 (MQ=255) accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAatat > 2:639556/1‑149 (MQ=255) accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAatat > 2:1233511/1‑149 (MQ=255) caccGCGTCAGTAGCTGAATAGGAGTGACATCTGAAAGAAACCGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCt < 2:1070322/149‑1 (MQ=18) cccGTCAGTAGCTGAACAGGAGGTACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGACCGGATGTTTCACGTACCTATGTCGAATATCTGGc < 2:795609/149‑1 (MQ=255) tCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCGATGTCGAATATCTGGCCGaa > 1:1545849/1‑148 (MQ=255) gCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGtt < 2:627403/149‑1 (MQ=255) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTTACTCATTAAGTTGGCAGCATCACCGAATTTTCAGCACGGATGTTTCCCGTACCTATGTCGAATTTCTGGCCGATAAGGTTg > 1:1070721/1‑149 (MQ=21) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTCCCTATGTCGAATATCTGGCCGATAAGGTTg > 2:432595/1‑149 (MQ=255) gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCAGCATACACTAAATCAGTAAGTTGGCAGCATGACCGTAGTTTCAGCCCGGAGGTTTCACGTACCAATGTCGAATATCTGGCAGATAAGTTTgag > 2:1398912/1‑147 (MQ=18) ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAACCACCATCAGACACTAAATCAGTAAGCTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGATTATCTGGCCGATAAGGTTGCGGATCg > 2:867283/1‑149 (MQ=255) ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCAGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCg > 2:1158053/1‑149 (MQ=255) gaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCga > 1:90133/1‑149 (MQ=255) gggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCgaga > 1:190699/1‑149 (MQ=255) ggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGagaa < 2:853805/149‑1 (MQ=255) aCAGCTGATAGAAACAGAAGCCCCTGGAGCACCTCCAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCACCGAATTTACAGACCGGCTGTTTCACTGCCCTATGACGCATAAGTTGCAGATAAGGTTGCGGATCGagaagc > 1:974949/1‑148 (MQ=17) aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACTTTTCCGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAgg < 2:107407/149‑1 (MQ=255) aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAgg > 2:1198682/1‑149 (MQ=255) gatgttAGAAACAGAAGCAACTGGAGCAACTAAACACCAACATCATACACTAACTCAGTAAGTTGGCAGCTGCACCGAATTTTCAGCCCGGATGGTTCACGTACCTATGTCTAATCTCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa < 1:894368/144‑1 (MQ=255) gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa < 1:1577409/149‑1 (MQ=255) gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa < 1:88849/149‑1 (MQ=255) tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCTTCATAGACTAATTCAGTAAGTTGGCAGCATCCCCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATg > 1:1216667/1‑149 (MQ=37) gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGGCGATAAGGTTGCGGATCGAGAAGAGGATGc > 2:330122/1‑149 (MQ=255) gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGc > 2:328438/1‑149 (MQ=255) aTAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATATTCAGCCCGGATGTTTCACGTTCCTATGTCGAATATCTGGCCGATAAGTTTGCGGATCGACAAGAGGATTCa > 2:1203884/1‑149 (MQ=25) tgAAACAGAAGCAATTGGATCATTTCAAAAACACGATCTTACAATAAATAAGTAAGTTGTCAGCTTCACCGAATTTTCAGCACGGATGTTTCAAGTACCTATGTGGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGTaga < 2:1554352/148‑1 (MQ=255) aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCaga > 1:154084/1‑149 (MQ=255) aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAgg < 1:176134/149‑1 (MQ=255) aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGa < 1:300133/149‑1 (MQ=255) aCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGaa > 1:1525783/1‑149 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCTAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATTCAGAGGAATATc < 2:768436/149‑1 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGCAGAGGAATATCTGGaa < 2:1321368/149‑1 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGaa > 1:765978/1‑149 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGCAGAGGAATATCTGGaa < 1:639556/149‑1 (MQ=255) ggAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCa < 2:1592645/149‑1 (MQ=255) gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATc < 1:1023344/149‑1 (MQ=255) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCa > 2:1310921/1‑149 (MQ=255) aCCTCAAAAACACCATCATACACTAAATCAGTAAGGTGGCAGCATCCCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGGTGCGGATCGAGAAGAGGATGCAGAGGATTATCTGGCAGCAATCAt > 2:356280/1‑149 (MQ=38) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATg < 2:220834/148‑1 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATg > 1:220834/1‑148 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGc < 2:33526/104‑1 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGa > 1:51773/1‑149 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGc > 1:33526/1‑104 (MQ=255) tCAAAAACACCATCATACACAAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTCCCAATGTCGAATATCTCGCCGATAAGGGAGCGGATAGAGAAGAGGATGCAGAGGAATTTCTGAAAGCAATCATgca > 2:1430738/1‑147 (MQ=37) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAg > 2:1300111/1‑149 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCTGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGACGAGAAGGTTGCGGCGCGAGAAGAGGATGCAGAGGAATATCTGGATGCAATCATGGCgg > 2:1078699/1‑149 (MQ=38) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAgg > 1:277768/1‑149 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTAGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCATAGTAATATCTGGAAGCAATCATGGatg > 1:1438917/1‑147 (MQ=255) aaCACCATCATACACTACAGCAGTATGTTGGCAGCATCTCCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGGAGAGAAGGTGGCGGATCGAGAAGAGGTTGCAGAGGAATATAGGGAAGCACTCACGGAGGGTc > 2:1078898/1‑149 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTc > 1:672662/1‑149 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCg > 1:701367/1‑149 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCgt < 2:808663/149‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGATTTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGTTCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGtt > 2:1520653/1‑149 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGtt > 2:798549/1‑149 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTa < 2:677082/149‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTATCAGCCCGGATGTTTCACGTACCTCTGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTAc < 2:289622/149‑1 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCg < 1:328438/149‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGAGGTTTCACGTACCTAGGGCGAATTTCTGGGCGATAATGTTGCGGATCGCGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGt > 2:1208438/1‑149 (MQ=255) cTAAATCAGTAAGTTGGCAGCATCACAGAATTTTCATCCCGGATGTTTCCAGTACCTATTTCGAATATCTGGCCGATAAGGTTGCTGATCGAGAAGAGGATGCAGAGGAAAATCTGGAAGCAATCATGGAGGCTAGTGTTACCGTTGCt > 2:1296722/1‑149 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCCTTGcgg > 2:933872/1‑147 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTg > 2:43020/1‑149 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAAGATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTg > 2:1262888/1‑149 (MQ=255) acaTCAGTCAGCTCCCAGCATAAACGAAATTTCACCCTGCTTTTTTCACGTACATATGTCGAATATCTGGCCGCTAAGGTTGCGCATCGAGAAGAGGATGCAGAGGAATATCTGGCAGCACTCATGGAGGCTCGTGTTACCGTTGCTgg < 2:1119412/147‑1 (MQ=255) aTCAGTAAGTTGGCAGCATCACCGATTTTTCAGCCCGTATGTTTCACGTACCTATGTCTAATATCTGGCCGATATGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCTTGGAGGCTCGTGTTACCGTTGCTGGCa < 1:1398912/149‑1 (MQ=255) gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCGGGCCGATAAGGTTGCGGATCGAGATGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCGCGTGTTACCGTTGCTGGCATggg > 2:1407206/1‑149 (MQ=255) gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCTGAGGATTATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATggg > 2:1595962/1‑149 (MQ=255) gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATggg > 1:1501703/1‑149 (MQ=255) ggtGGCAGCATCACCGAATTTTCAGCCCGGATGTGTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCTAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTg < 2:128055/147‑1 (MQ=255) gTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTg > 1:372171/1‑149 (MQ=255) gcagcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGa < 2:51773/149‑1 (MQ=255) catcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGAt < 1:1470800/146‑1 (MQ=255) cagcaTCACCGAATTTTCAGCCCGGATGGTTCACGTACCTATGTCGAATCTCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGAt < 2:1211779/149‑1 (MQ=255) agcaTCACCGAATTATCAGCCCGGATGTTTCACGTACCTATGTCTAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCACTCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATg < 1:870761/149‑1 (MQ=255) aTCCCCGAATTTTCATCCCCGCTGTTTCACGTACGTATGGAGAATTTCTTGCCGATATGGGTTCGTATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCACTCATGGAGGCTCGTGTTACCGTTGCTGCCATGTGGCTGGTGATGGAg < 2:1070721/149‑1 (MQ=255) aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAg < 2:154084/149‑1 (MQ=255) aCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTg > 2:747701/1‑149 (MQ=255) ccGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAAGCATGGAGGCTCGTGTGACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGc > 2:285863/1‑149 (MQ=255) cGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCGGAGGAATATCTGGAAGAAATCATGGAGGCTCGAGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCa > 1:1105403/1‑149 (MQ=255) cGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCa > 2:1378628/1‑149 (MQ=255) | TAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCA > NC_000913_3_hsa_pgi/291258‑291549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |