| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218568 = | 61 (1.270) | 762 (16.920) | 197/228 | NT | 93.0% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_hsa_pgi | = 4254058 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 1097 total aligned reads displayed.
CAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_hsa_pgi/4218421‑4218716 | ttgtacgatgtaaaaaagccggtagatcagccgtctttcttgtgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcctaatttattgaatttgcagattatggaatgccggataaggcgttttcgccgcatccggcaa > 2:80335‑M1/148‑149 (MQ=255) atgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgaagattatggaaggccggataaggcgttttcgccgcgtccggcAATtct < 1:570078‑M1/6‑1 (MQ=255) atgtaaaaaagccggatgatcatccggttttcttctgggttgcctgatgtgcggtgcttctcaggcctacacaacacaccgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTg > 1:765927‑M1/141‑149 (MQ=255) atgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTg > 1:557500‑M1/141‑149 (MQ=255) atgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTg > 1:510990‑M1/141‑149 (MQ=255) taaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacaccacacatcgcaatttattgaatttgcagattatggaaatccggaaaaggcgttttcgccccatccggcAATTCTCTGCTc < 2:630861‑M1/12‑1 (MQ=255) taaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTc > 1:146107‑M1/138‑149 (MQ=255) taaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTc < 1:834651‑M1/12‑1 (MQ=255) aaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtg < 2:346189‑M1/15‑1 (MQ=255) aaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtg > 2:615012‑M1/135‑149 (MQ=255) aagccggatgatcactcggctttcttctgggtcgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCtgat > 2:496218‑M1/133‑149 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCAGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGAGTCTTATCATGCCTACAGCCGTTGCCGACCGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTCCTCCTGATGAgg > 2:289626/1‑149 (MQ=255) cggatgatcgtccggcttttttctgggttgcgtgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg > 1:824713‑M1/129‑149 (MQ=255) cggaggatcatccggcttgcgtctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg > 1:423201‑M1/129‑149 (MQ=255) gatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatgggaagccggataaggcgttttcgccgcatccggcAATTCACTCCTCCTGATgaggcc < 2:575770‑M1/23‑3 (MQ=255) atcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatgcggcAATTCTCTGCTCCTGATCACGTCGCTa < 2:117010‑M1/27‑1 (MQ=255) catccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTaaa > 1:368307‑M1/121‑149 (MQ=255) catccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTaaa > 2:538442‑M1/121‑149 (MQ=255) atccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgccatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTGTGCTCCTGATGAGGGCGCGAAAt < 1:847461‑M1/30‑1 (MQ=255) atccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAAt < 2:650935‑M1/30‑1 (MQ=255) cggctttcttctgggttgcctgatgcgcggcgcttctccggcctacacaacacatcgccatttattgaatttgcagattatggaaggccggataaggcgcttttgccgcatgcggcAATTGTCTGCTGCTGATTAGGGCGATAGATGcc < 1:332552‑M1/33‑1 (MQ=255) ggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGATAAATGCcg < 1:975744‑M1/34‑1 (MQ=255) ctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgcg < 1:470020‑M1/36‑1 (MQ=255) tttcttcgtggttgcatgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGt > 2:592151‑M1/113‑149 (MQ=255) ttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatctcattttatttattttgtagattatggaaggccggatatggtgttttcgacgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTg > 1:45158‑M1/112‑149 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGcc < 2:555343‑M1/41‑1 (MQ=255) gggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGa < 1:808999‑M1/45‑1 (MQ=255) ggtttcttggtgcgcggcgcttctcatggctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcggtttcgccgcatccggcAATTCTCTGCGCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGaa > 1:389265‑M1/104‑149 (MQ=255) ggttgcctgatgcgcggcgcttctcaggtctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGaa > 1:251969‑M1/104‑149 (MQ=255) tgcctgatgcgcggcgcttcccaggcctacacaaaccatcgcaatttattgaagttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta > 1:495288‑M1/101‑149 (MQ=255) gcctgatgggcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattat > 1:608402‑M1/100‑149 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgccgattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTACTCCTGATGCGGGCGCTAAATGCCGCATGGCCTGGAattatt < 1:207934‑M1/51‑1 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt < 1:630760‑M1/51‑1 (MQ=255) ctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGCCCTGgaattatgc < 2:518384‑M1/52‑3 (MQ=255) tgatgcgctgcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga > 1:316703‑M1/97‑149 (MQ=255) tgatgcgcggctcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga > 1:918880‑M1/97‑149 (MQ=255) tgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga > 1:354996‑M1/97‑149 (MQ=255) atgctgggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgatt > 2:77360‑M1/95‑149 (MQ=255) atgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgatt > 2:675429‑M1/95‑149 (MQ=255) cgcggcgcttcttaggactacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCt > 1:131990‑M1/92‑149 (MQ=255) cgcttctcaggcctacaaaacacattgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAAc > 1:268138‑M1/87‑149 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCt > 1:721783‑M1/81‑138 (MQ=255) tcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtttt > 1:348682‑M1/81‑149 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggatacggcgttttcgccgcatccggcAATTCTCTGCTCCTGATATGGGCGATAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGc < 1:6172‑M1/71‑1 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt < 1:958758‑M1/51‑1 (MQ=255) gcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCACTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGcac < 1:863308‑M1/73‑2 (MQ=255) gACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAg > 1:595462/1‑149 (MQ=255) ctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGCGGCCTGGAATTATTGCTTGCGCAAACCAGTTTGCAAgg < 2:181057‑M1/75‑1 (MQ=255) ctacacaacacatcgcaatttattgaatttgcagattatggaaggccgcataagccgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCGCAAACCATTTTGCAAgg < 2:920356‑M1/75‑1 (MQ=255) ctaaacaactcatcgtaatttttttaatttgtatattatggaagtccggatatggcgttttcgcttcatccgggAATTCTCGGGTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAgg > 1:120655‑M1/75‑149 (MQ=255) cacaacacatcgcaatttattgaatttgcagattatggaaccagataagaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGCATTATTGCTTGCTCAAACCATTTTGCAAGGCtt < 1:990956‑M1/78‑1 (MQ=255) acaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc < 1:1003422‑M1/79‑1 (MQ=255) caacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGGGACCTAGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCg < 1:229232‑M1/80‑1 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 1:166212‑M1/81‑1 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa > 1:942580‑M1/69‑149 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 2:736885‑M1/81‑1 (MQ=255) aaatattgcaagtttttgaatttgtcgattatggaaggcctgataagtccttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTACAATTTTTGATTGCTCAAACCATTTTGCAAGGCTTCGAt > 2:467035‑M1/68‑149 (MQ=255) gcgTCTTATCATGCCTACAGGCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCCGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATg < 2:354647/149‑1 (MQ=255) cgTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGACAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTg > 2:940867/1‑108 (MQ=255) tCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatt < 1:544201/111‑1 (MQ=255) aatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCCTTGCCTGGAATTATTGATTGCTCCAACCATTTTGCAAGGCTTCTATGCTCCGTAt < 2:416663‑M1/91‑1 (MQ=255) tttgttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATgg > 2:159047‑M1/57‑149 (MQ=255) tttattgaatttggagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATgg > 2:750578‑M1/57‑149 (MQ=255) attgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAGTGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCATTATGGTCg < 1:691926‑M1/96‑1 (MQ=255) attgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCg > 1:704116‑M1/54‑149 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGAGCTAAATGCCGCGTCGCCTGGAATTATTGCTTGCTCAAACCATTTTGCAAGGCTTCGGTGCTCAGTATCgtcca < 2:378129‑M1/97‑3 (MQ=255) gtgaatttggagattattgaaggccggataaggcggtttcgtCGCATCCGGCTATTCTCTGCTCCTGATGAGGGAGCTAAATGTCGCGTGGCCTGGAATTATTGCTTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa > 2:308067‑M1/43‑149 (MQ=255) ggatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAtt > 1:411206‑M1/51‑149 (MQ=255) cagattatggaaggtcgcataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 2:687445‑M1/44‑149 (MQ=255) agattttggaagggcggataagtcgttttcgccgcatccggtTTTCGAATAATCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAg > 1:190462‑M1/43‑149 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCCCAGTATGGTCGATTCCTCGAAg < 2:833291‑M1/107‑1 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGAGTGGCCTGGAATTATTGCTTGCTCAAACCATTTTGCAAGGCTTCGATGACCAGTATGGTCGATTCATCgaaa < 2:272337‑M1/107‑2 (MQ=255) gattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGt > 1:886117‑M1/42‑149 (MQ=255) attatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGCAGTATTGATTGCGCAAACCAGTTTGCAAGGCTTCGATGCTCAGTATGGTCAATTCCTAGAAgtt < 2:712660‑M1/109‑2 (MQ=255) tatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGAc < 1:179295‑M1/111‑1 (MQ=255) ggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGCAGTGACCTCCGGt < 2:202571‑M1/118‑1 (MQ=255) gccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTAATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTg < 2:867131‑M1/119‑1 (MQ=255) ccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAATTTGCCAGGCCTCGCTGCTAACTCTGGTCCATTCCTCCCACAGACctccgtggc < 2:446629‑M1/120‑5 (MQ=255) cTGGATAAGGCGTTTACGCCACCACCTTCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTgc < 2:959777/149‑1 (MQ=255) cggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa > 2:137708‑M1/29‑90 (MQ=255) aggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 2:980511‑M1/97‑1 (MQ=255) ggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCTGGGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACTTCCGGTGCGCagcagc > 1:876545‑M1/22‑149 (MQ=255) ggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCagcagc < 2:324458‑M1/128‑1 (MQ=255) gttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAATGCTTCGCTGCTCTTGATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGtt > 1:740988‑M1/19‑149 (MQ=255) ttttcgccgcatcctgcAATTCTTTGCTCCTGATTAGGGCGCTTGATGCAACGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGttt > 1:480078‑M1/18‑149 (MQ=255) ttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTa > 1:893750‑M1/18‑107 (MQ=255) gcggcgcATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCGGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGa < 2:248708/145‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTCACTGCCGCGTGGCCTCGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCGGCGTTTCGAACa < 1:653969‑M1/138‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa < 2:1003579‑M1/138‑1 (MQ=255) cgcatccggcAATTCTCTGGTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAg > 1:67084‑M1/11‑149 (MQ=255) cgcatccggcAATTCTCTGCTCCTGATGATGGCTCTAAATGCCGCGTGGTCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGAAGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAg > 1:286066‑M1/11‑149 (MQ=255) cgcatccggcAATTCTCTGCTCCTGATGAGGGGGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAg > 2:222491‑M1/11‑149 (MQ=255) gcatccggtAATTGTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAgg > 1:782114‑M1/10‑149 (MQ=255) gcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAgg > 2:39998‑M1/10‑149 (MQ=255) tccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCCGCGTTTCGAACAGGCCg < 2:884768‑M1/143‑1 (MQ=255) cggcAATTCGCGGCTCCGGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTGAAACCATTTTGCAAGGCTTCGATGCTTAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGAc > 2:892396‑M1/5‑149 (MQ=255) ggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGAc > 1:302844‑M1/4‑114 (MQ=255) ggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACt < 1:529794‑M1/146‑1 (MQ=255) ggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGAACACCGGTGCGCAGCAGCGTTTCGAACAGGCCGACt < 1:377852‑M1/146‑1 (MQ=255) gcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAGTTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTg < 1:904247‑M1/147‑1 (MQ=255) | CAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_hsa_pgi/4218421‑4218716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |