New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	3908414 =	NA (NA)	5 (0.100)	5/242	NT	9.1%	noncoding (28/64 nt)	REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913_3_hsa_pgi	= 4614382	50 (1.050)					noncoding (98/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences

GATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTT  >  NC_000913_3_hsa_pgi/3908268‑3908560                                                                                                                                                   |                                                                                                                                                   gattgcgcaaacgttgcttaataacacgtatacgttgtttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcttcttatcatgcctacaggtttgtgccgaAcc                                                                                                                                                  <  1:978681‑M1/3‑1 (MQ=255)    atCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCATGATGCACTTCGCTAATCACGCTTACCGTa                                                                                                                                               >  2:277006/1‑149 (MQ=255)     tacaagTTGATGTTTTTCATGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACTAACCTGAATTTTACTCGGTTCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAg                                                                                                                                              <  1:721811/144‑1 (MQ=255)     tCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATAAGGCTTACCGTAg                                                                                                                                              >  1:472037/1‑149 (MQ=255)       cAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTCGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGc                                                                                                                                            >  2:718768/1‑149 (MQ=255)       cAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGc                                                                                                                                            >  1:764918/1‑149 (MQ=255)        caagcgttgcttaataacacgtatacgttgtttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccgaaccataagac                                                                                                                                           <  1:767101‑M1/10‑8 (MQ=255)        aGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCAGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGTcc                                                                                                                                           >  1:254932/1‑149 (MQ=255)          gTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACACTGGGCATAGTGATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCgg                                                                                                                                         >  1:233312/1‑149 (MQ=255)           ttGATGGTTTTTAAGGAAGGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTGTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGa                                                                                                                                        <  1:234607/149‑1 (MQ=255)           gcgttgcttaataacacgtatacgttgtttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccgaACCGTAGGCCGGa                                                                                                                                        >  1:291568‑M1/137‑149 (MQ=255)            tGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGAt                                                                                                                                       <  1:786540/149‑1 (MQ=255)              aTGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTCGGCCgcacca                                                                                                                                     >  2:944948/1‑144 (MQ=255)               tGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTTCTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAg                                                                                                                                    <  1:826963/149‑1 (MQ=255)               tGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCGGGCTTACCGTGGGCCGGATCAg                                                                                                                                    >  1:519425/1‑149 (MQ=255)                gTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGCTGCCCTTCCCTAATCAGGCTTACTGTAGGCCGGATCAga                                                                                                                                   >  2:602651/1‑148 (MQ=255)                 tttttCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGc                                                                                                                                  <  1:786578/149‑1 (MQ=255)                 tttttCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGc                                                                                                                                  <  1:76018/149‑1 (MQ=255)                  ttaataacacgtatacgttgtttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgtgacgcttaacccgtcttatcatgcctacaggtttgtgccgaACCCTAGGCCGTGTCAGGCg                                                                                                                                 <  2:684831‑M1/20‑1 (MQ=255)                    ttCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGtt                                                                                                                               <  2:276722/149‑1 (MQ=255)                     tCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTCTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTc                                                                                                                              <  1:253243/149‑1 (MQ=255)                       aacacgtatacgttgtttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccgaACCGTAGGCCGGATCAGgcgtttcc                                                                                                                            <  2:773864‑M1/25‑4 (MQ=255)                       aGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAc                                                                                                                            <  1:795766/149‑1 (MQ=255)                                  gttGGCGTAGTAGAATTTCAAATTACGTACTTGAATTTTACTAGGGGCAGGTTCAACCATACTCATTGCAATCTTTTCCTCACCGTGCCTGATGCACTTCGCTAAGCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCgg                                                                                                                 <  2:327561/148‑1 (MQ=255)                                      tttaacgtgccgtaggccggataaggcgttcacgccgcatccggcagttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccgaACCGTAGGCCGGATCAGGCGTTCCCCccccatcccgccgt                                                                                                             <  2:688246‑M1/40‑7 (MQ=255)                                      ccGTATTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCaaa                                                                                                             <  1:45191/149‑1 (MQ=255)                                      ccGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCATGCGTTCACGCCGCATCCGGCaaa                                                                                                             <  1:746668/149‑1 (MQ=255)                                       cGTAGTAGAAGTTCCAATTACGAACCTAAATTTTACTAGCGACAGTTTCAACCATACTCATAGAAATCTTTTCCTCCTCGTGCCTGATACACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTGCAAGCCGCGTCCGGCAAAg                                                                                                            >  2:944229/1‑149 (MQ=255)                                            tagAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTAAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTa                                                                                                       >  1:237310/1‑149 (MQ=255)                                              gtaGTTTAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAc                                                                                                     <  1:153584/147‑1 (MQ=255)                                                 gTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgt                                                                                                  <  1:211024/149‑1 (MQ=255)                                                      tatcaCGGACCTGAACTTTCCTCGGGGCAGTTTGAAACATCCTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTTGCGAACCAGGCTTACCGTAGGCCGGATCAGGCGTTCACTCCGCATCCGGCAAAGTGTTAACCGTGTACa                                                                                             <  2:331924/145‑1 (MQ=255)                                                           cGAACTTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTc                                                                                        <  2:782403/149‑1 (MQ=255)                                                              aCCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTGTCCTCATCGTGCCTGATGCACTTCGCTAAGCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa                                                                                     <  1:367093/149‑1 (MQ=255)                                                                ctctaTTTTACTCGGTGCAGTTTTCACCATCATCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAAACAGGCATACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaaaa                                                                                   <  2:664901/145‑1 (MQ=38)                                                                      tttACTCGGTGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAGGTGTTAACCGTGTACAGAGTCAAAAAGGCCCt                                                                             >  2:271079/1‑149 (MQ=255)                                                                         aCTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcgg                                                                          <  1:625635/149‑1 (MQ=255)                                                                           tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGTCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtc                                                                        <  1:892617/149‑1 (MQ=255)                                                                           tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtc                                                                        <  1:718768/149‑1 (MQ=255)                                                                           tCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtc                                                                        >  2:454090/1‑149 (MQ=255)                                                                            ccgggCAGTTTTAATCATACTCATTGCAATCTTTTCCTTATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCtcggtcg                                                                       <  1:130215/147‑1 (MQ=255)                                                                               ggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCggtcggtc                                                                    >  1:671764/1‑149 (MQ=255)                                                                               ggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCggtcggtc                                                                    >  1:759082/1‑149 (MQ=255)                                                                                gCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTcc                                                                   >  2:707164/1‑149 (MQ=255)                                                                                gCAGGTTCACCCATACTCATTTCAATCTTTTCGTCATCGTGCCTTATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCCTCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTcc                                                                   <  2:324283/149‑1 (MQ=255)                                                                                    gttggcgcacaatgcctgatgcgacgcttaacgcgtcttatcatgcctacaggtttgtgccgaACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTc                                                               <  2:9480‑M1/86‑1 (MQ=255)                                                                                          ccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCATGTACAGAGTCAAAAAGGCGCTCGGTCGGTCTCCTCCACCct                                                         >  2:436728/1‑149 (MQ=255)                                                                                            aTACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct                                                       >  1:923104/1‑149 (MQ=255)                                                                                             tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGCTCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCCCGCCCCCCTg                                                      >  2:560384/1‑149 (MQ=255)                                                                                                 cATTGCATTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGga                                                  <  1:967336/149‑1 (MQ=255)                                                                                                       aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACTGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTTTGGGGAGAGGGt                                            >  1:795037/1‑149 (MQ=255)                                                                                                       aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAAAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGCGGGt                                            >  1:630033/1‑149 (MQ=255)                                                                                                         tCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                          <  2:759082/149‑1 (MQ=255)                                                                                                         tCTTTTCCTCATCGTGCCTGATGCACTTAGCTAATCAGGCCTACCGTAGGCCGGATCAGGAGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCACTCGCCCCTCTGGGGAGAGGGTTa                                          >  2:90089/1‑149 (MQ=255)                                                                                                           ttttCCTCATCGTGCCTGATGCACTTCGCTAAGCAGGCTTACCGTAGTCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGTGTAgg                                        >  1:29488/1‑149 (MQ=255)                                                                                                           ttttCCGCATCGTGCCTGATGCACTGCCCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                        <  1:328946/149‑1 (MQ=255)                                                                                                            tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                       <  2:237310/149‑1 (MQ=255)                                                                                                                taacgcgtcttatcatgcctacaggtttgtgccgaACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                   >  1:9480‑M1/36‑149 (MQ=255)                                                                                                                cTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                   <  1:313223/149‑1 (MQ=255)                                                                                                                 tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGCCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg                                  >  1:320283/1‑149 (MQ=255)                                                                                                                   aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCCTGTGTTCACGCCTCATCCGGTAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgggg                                <  1:28977/149‑1 (MQ=39)                                                                                                                    tCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTGGGGGGCGGGGa                               >  1:584528/1‑149 (MQ=255)                                                                                                                     cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGGTAACCGTGTACAGAGTCAACATGGGGTACGCCCCAACCCCTCGCCGCTGTGGGGAGAGGATTAGGGTGAGGGGaa                              >  1:479130/1‑149 (MQ=37)                                                                                                                           tGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCgt                        >  1:691795/1‑149 (MQ=255)                                                                                                                                   ttCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACCGAGTCAAAAAGGCCCTCGGTCGGTCCCCTCGCCCCTCCGGGGAGCGGGTTAGGGTGAGGGGAAAACCGTGTCAGCaa                >  2:181429/1‑149 (MQ=255)                                                                                                                                   ttCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCTCCTCTGGGGAGGGGATTGGGGTGAGGGGAATAGCGTGTCCGCaa                >  1:277978/1‑149 (MQ=39)                                                                                                                                   ttCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCaa                >  2:562143/1‑149 (MQ=255)                                                                                                                                      tcTAATCATGCCTACGGCAGGCCTGAACAGGTGTCCACGCCGCAATCGGCAAAGTGTTAACCGTCGACAGCGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCTCCTCTGGGTAGCGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat             <  2:300611/148‑1 (MQ=25)                                                                                                                                        tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCa           >  2:692604/1‑149 (MQ=255)                                                                                                                                        tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAAAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGAGGAAAACCGCTTCAGCAATATcc           >  2:188986/1‑148 (MQ=255)                                                                                                                                               gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACa                                                                                             >  2:749153/1‑60 (MQ=255)                                                                                                                                               gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACa                                                                                             <  1:749153/60‑1 (MQ=255)                                                                                                                                               gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGAGTGGAGGGAAAACCGTGTCAGCAATATCAACCgtgt    >  1:103322/1‑149 (MQ=255)                                                                                                                                                 ttACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGATAACCGTGTACAGAGTCAAAAAGACGCTCGGTCGGTCCCCTCGCCCCTATGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCCGGAATATAAACCCTGttt  >  2:154757/1‑149 (MQ=38)                                                                                                                                                   |                                                                                                                                                   GATATCCAGGTTGATGTTTTTCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTT  >  NC_000913_3_hsa_pgi/3908268‑3908560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.