| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218567 = | 70 (1.310) | 8 (0.150) +T |
7/268 | NT | 10.3% | noncoding (132/132 nt) | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913_3_hsa_pgi | = 4254056 | NA (NA) | noncoding (128/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 1042 total aligned reads displayed.
CATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCAC > NC_000913_3_hsa_pgi/4253908‑4254204 | aTTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATACGGCGTTTTCGCCGCCTCCGG < 1:874097‑M2/149‑1 (MQ=255) aTTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATTCGG < 1:960224‑M2/149‑1 (MQ=255) tgatgaTGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCCCCGCATCCGGCaatt < 2:369816‑M2/149‑5 (MQ=255) gatgTAAAAAAGCCTGATGAGCAGTCGGTTTTCTTCTGGGTCGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct > 2:91085‑M2/1‑141 (MQ=255) gatgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct < 1:326202‑M2/149‑9 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAGAAGGCGTTTTCGCCGCATCCGGCaattctctg > 1:846027‑M2/1‑140 (MQ=255) tAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGATTCTAAGGAATACACAAAACATAGCAATTTATTGAATTTGCAGATTATGGAAGGCAGGATAAGGCGTTTTCGCAGCATCAGGAaattctctgtgc < 1:52169‑M2/149‑13 (MQ=255) aaaaaGCCGGATGATCATCCGGCGTTCTTCTGGGTTGCCTGATGCGCAGCGCTTCTCAGGCCTACACAACACATGGCAATTTATTGAATTTGCAGATTATGGAGGGAAGGAGAAGGGGCTTTCGCCGCATCCGCCTATtctctgtccct > 1:778825/1‑143 (MQ=255) aaaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACACCACATCGCAATTTATTGAATTTGCAGATTATGAAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctg < 2:883457‑M2/149‑16 (MQ=255) aaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTAAATTTGCAAATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATACGGCaattctctgttcctaat < 1:253113‑M2/149‑18 (MQ=255) aGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGACCTACACCACGCATCGCAATTTATTGAATTTGCAGATTATGAAAGGCCGGATAGGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatg < 1:486912‑M2/149‑19 (MQ=255) ccTGATGATCATCCGGCTTTCTTCTGGGTTGCTTTATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTCCAGATTATGGAAGGGCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgag > 1:885572‑M2/1‑129 (MQ=255) tgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgc > 1:764178‑M2/1‑124 (MQ=255) atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATGCGGCaattctctgctcctgatcacgtcgcta < 2:117010‑M2/149‑28 (MQ=255) catcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaa > 2:936567‑M2/1‑120 (MQ=255) catcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaa > 1:833591‑M2/1‑120 (MQ=255) atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACGACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaat < 1:452682‑M2/149‑31 (MQ=255) acccggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTAGGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaat > 1:720444‑M2/3‑119 (MQ=255) ggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctcaatgccg < 1:566963‑M2/149‑35 (MQ=255) cTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcg < 2:775774‑M2/149‑37 (MQ=255) cttcttctGGGTTGCCTGGTCTGCGGCGCTTCTAAGGCCTACACAACACATCGCAATGTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgt > 2:483121‑M2/2‑112 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcc < 1:177081‑M2/149‑42 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcc > 2:977086‑M2/1‑108 (MQ=255) tctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCATACACAACACATCGCACTTTATTGAATTTACGGATTATGGAAGGCCGGATAAGGCGTTTTCACCGCATCAGGCAATTCTCCCTGATTACCCTTCCACCTGAGTCGCACCCTCAAt > 2:289719/1‑149 (MQ=255) tctGAGTTGCCTCAAGCGCCGCTCTACACACGCCTACACAACACATCACAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcct > 1:942868‑M2/1‑107 (MQ=255) gcctgccTGAGGTGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTGATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaa > 2:958014‑M2/4‑103 (MQ=255) ttGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaatt > 2:177197‑M2/1‑101 (MQ=255) gtctgACGCGCGGCGCTTCTGAGGACGACACAACACATTGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATTCGGCaattctctgctcttgatgagggcgctaaatgccgcgtggcctggaattat > 2:59811‑M2/3‑99 (MQ=255) gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAAGTTGCAGATTATGGAAGGCCGGAGAAGGTGTTCTCGCAGCATCTGGCaatacactttgccggatgagggcgctaaatgcctcgtggcctggaattat > 2:715984‑M2/1‑99 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatt < 1:630760‑M2/149‑52 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatt < 1:429146‑M2/149‑52 (MQ=255) tGATGCGCGGCTCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattga > 1:918880‑M2/1‑96 (MQ=255) gATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgat < 1:805457‑M2/149‑55 (MQ=255) tGCGGGGGGCGTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattg > 1:138202‑M2/1‑93 (MQ=255) gcgcGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgc < 1:361484‑M2/149‑58 (MQ=255) cggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctca > 1:615359‑M2/1‑89 (MQ=255) ggctTTTCAGGCCTACAAAACACAACGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaac > 2:52347‑M2/2‑86 (MQ=255) cgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaac > 1:343208‑M2/1‑86 (MQ=255) ttCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccat > 1:534187‑M2/1‑83 (MQ=255) ctcATGCCTACACAACGCCGCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctttgctcctgatgatggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattt > 2:131296‑M2/1‑81 (MQ=255) ctcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaacaattt < 1:382822‑M2/149‑69 (MQ=255) aGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGCGAGCCGGATCAGGCGTGTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggacttattgattgctcaaaccattttgc < 1:991259‑M2/149‑72 (MQ=255) aGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggacttactaattgcacaaaccagtttcc < 2:452313‑M2/149‑72 (MQ=255) aGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattga > 1:824593‑M2/1‑78 (MQ=255) gCCTGCAAAACAGATGGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCGGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa > 1:218410‑M2/1‑76 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcactaaatgccgcgtggcctggaattattgattgctcaaaccattttgcac < 1:863308‑M2/149‑74 (MQ=255) ccTAAAAAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTGTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctataggtcgcgtggcctggaattattgattgctcaaaccattttgcaag > 2:419892‑M2/1‑75 (MQ=255) cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGGTTTCGCCGCATCCGGCaattatctaattcgtatgggggcgctaaatgccgcgtggcctgaaattattgattgctaaaacacttttgcaagg < 1:233098‑M2/149‑76 (MQ=255) tACACAACACATCGCAATTTATTGAATTTGCAGATTCTGGAAGCCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcatgatgagggcgataaatgccgcgtggcctggcaattttgatggctcaaaccaatctgcaacac < 2:198365‑M2/149‑77 (MQ=255) tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGTCGTTTTCGCCGCATCCGGCaattctctcctcctgatgaggtcgctaactgccgcgtggcctggacgtatttattactaaaaccattttgcaaggc < 2:383643‑M2/149‑77 (MQ=255) tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgcagcgtgacctggaattcttgattacttaaaccattttgcaaggc < 2:405990‑M2/149‑77 (MQ=255) cacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatt < 2:660628‑M2/122‑52 (MQ=255) acaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttc < 1:1003422‑M2/149‑80 (MQ=255) aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccccgtggcctggaattattgattgctcaaacccttttgcaaggcttcga < 1:604918‑M2/149‑82 (MQ=255) cacaTCTCAATTTATTTAATTTGGAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatg > 2:548623‑M2/1‑66 (MQ=255) tCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctca < 2:585013‑M2/149‑88 (MQ=255) tCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctca > 1:373687‑M2/1‑62 (MQ=255) gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctaaaaccattttgcaaggcttcgattgtcagt < 1:291316‑M2/149‑90 (MQ=255) gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattatctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctccgt < 2:350230‑M2/149‑90 (MQ=255) taatTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagta > 2:245406‑M2/2‑59 (MQ=255) aTTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatg > 1:653508‑M2/1‑57 (MQ=255) tttATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatgg < 1:703628‑M2/149‑94 (MQ=255) ttATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggt < 2:637767‑M2/149‑95 (MQ=255) ttATTGAATGTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggt > 2:620754‑M2/1‑55 (MQ=255) aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaagtgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcattatggtcg < 1:691926‑M2/149‑97 (MQ=255) ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcga < 1:47358‑M2/149‑98 (MQ=255) ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggattcgatgctcagtatggtcga < 1:188524‑M2/149‑98 (MQ=255) tttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgaggcaactaaatgccgcgtgacctggaattattgattgctcaaaccattttgcaaggcttcgatgattagtatggtcgattcat < 1:893342‑M2/149‑103 (MQ=255) ttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctc > 2:326202‑M2/1‑46 (MQ=255) gCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcga < 1:580066‑M2/149‑106 (MQ=255) tagATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 1:164919‑M2/2‑43 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatg > 2:739273‑M2/1‑42 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatg < 1:739273‑M2/134‑93 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgcccagtatggtcgattcctcgaag < 2:833291‑M2/149‑108 (MQ=255) aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgagtggcctggaattattgcttgctcaaaccattttgcaaggcttcgatgaccagtatggtcgattcatcgaaa < 2:272337‑M2/149‑108 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtga < 1:200645‑M2/149‑111 (MQ=255) tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTc < 2:506495/130‑1 (MQ=255) aaGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCAt < 1:130179/149‑1 (MQ=255) aGGCCGGATAAGGCGTGTACGCGGCATCCGGCaattctctgctcctgatgagggtgctaaatgccgcgtggcctggaattattgagtgctcaaaccattttgcaaggcttcgatgctcagtatggtcgatccctcgaagtgacctccgg > 2:762574‑M2/1‑32 (MQ=255) ggCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgataactatagtcgatttatcgtattgacctcatct < 1:11475‑M2/149‑119 (MQ=255) gCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattaattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtg < 2:867131‑M2/149‑120 (MQ=255) cGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcg < 2:889158‑M2/149‑122 (MQ=255) aTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcag > 1:977152‑M2/1‑25 (MQ=255) tAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagc < 1:310305‑M2/149‑126 (MQ=255) aaGGCGTTTTTGCCGTATCCGGGaattctcttgttcgtatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagca > 2:804100‑M2/1‑23 (MQ=255) ggCGCTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctacggtgcgcagcagc > 2:570078‑M2/1‑21 (MQ=255) gCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcg < 1:270495‑M2/149‑130 (MQ=255) gCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTCTCGCt > 2:15233/1‑149 (MQ=255) cGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgt > 2:222098‑M2/1‑19 (MQ=255) ttttGCCGCACCCGGCaattctctgctcttgatgagtgcgctaaattccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttc > 1:504082‑M2/1‑16 (MQ=255) tttCGCCGCATCCGGCaattctctgctcctgatgagggcgctacatgccgcttggcctggaattattgattgctcaaaccattgtgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttc > 1:415938‑M2/1‑16 (MQ=255) tatcgCCGCAGCCGGCaattctctgctcctgatgaggtcgctaaatgccgcggggcctggaattattgattgctcaaaccatgttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttc > 1:55217‑M2/3‑16 (MQ=255) ttCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcg > 1:903697‑M2/1‑15 (MQ=255) gcgcATCGGGGAATGCTCTCTGATTACGCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGTTATCGCTGATATAccc < 2:694869/148‑1 (MQ=255) ccgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaaca > 1:393796‑M2/1‑11 (MQ=255) ccgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaaca < 2:1003579‑M2/149‑139 (MQ=255) cgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacag > 2:676056‑M2/1‑10 (MQ=255) cgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtttcgaacag > 2:31089‑M2/1‑10 (MQ=255) cATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcccaacagcgtctcgaacaagc < 1:351141‑M2/149‑142 (MQ=255) ggCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCAc > 1:669338/1‑149 (MQ=255) | CATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCAC > NC_000913_3_hsa_pgi/4253908‑4254204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |