New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_hsa_pgi | 662343 = | 44 (0.820) | 3 (0.060) | 3/254 | NT | 6.5% | intergenic (‑65/+36) | lipB/ybeD | octanoyltransferase; octanoyl‑[ACP]:protein N‑octanoyltransferase/UPF0250 family protein |
? | NC_000913_3_hsa_pgi | 662368 = | 45 (0.900) | intergenic (‑90/+11) | lipB/ybeD | octanoyltransferase; octanoyl‑[ACP]:protein N‑octanoyltransferase/UPF0250 family protein |
GAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTACCGTTGGGGTGTA > NC_000913_3_hsa_pgi/662220‑662516 | gagaTTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑g > 2:744336/1‑149 (MQ=255) tGGCTTGTAAGGATGAAGACCGAGCTGGCTTAGAATAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGCAAAAGTGTGCTAAAAGTATATCACAGCGAGGTGAGGGGAGTTACCCGACCAGGAGCCGTTTAAC‑TGAGaa < 2:459518/149‑1 (MQ=255) tCGAAAGGCTGAAGACCGAGCTGGCGGACAATAATTTTATCCTTATACAAAACGGCATCTCCGTGGAGAATGAGTAAAATTGGGGGAAAAGTATATCACAGCGAGTAGAGGGGAGTTACCCGAACAGGAGCCGGGTAAC‑GGAGAAGCGa < 1:762315/149‑1 (MQ=255) ccGTAAGGCTGAAGACCGAGCTGGCGAACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGa < 2:378159/148‑1 (MQ=255) cttAAGGCTGAAGACTGAGCTGGCGGACAAGAATTTTATCCCGATACAAAACGGCATCTACGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATTACAGCGTGGAGAGGTGATTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAg < 1:660411/147‑1 (MQ=255) aaGGCTTAAGACCGAGCTGGCGGACAAGAATTTGATCCTGACACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTa < 1:24082/149‑1 (MQ=255) ggCTGAAGACCGAGCTGGCGGACAAGAATTTTATCGTGATACAAAACGGGATATCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGACGGGTAAC‑GGAGAAGCGAGTTaga > 2:366574/1‑147 (MQ=255) gAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGTGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGCGCAGCGAGATCCCGAAc > 2:753172/1‑149 (MQ=255) gAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAA‑GGAGAAGCGAGTTACAGAAc > 1:511082/1‑149 (MQ=255) aGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTTCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCa < 1:707836/149‑1 (MQ=255) gACCGAGCTGGCGGACAAGAATTTTACCCTCTGTCAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGAGGAGTTACACGAAAAGGCGCCGGGTAAC‑GGAAAATCGAGTCAGAGaagcgt > 2:217440/1‑145 (MQ=255) ccGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGc < 1:175204/149‑1 (MQ=255) tcgCGGAAAAGTATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAAGTAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACaa < 2:433465/147‑1 (MQ=255) ttATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGCGACGCCGATGACAGAACCATGCGGACAATATCGATTTTGCCCa < 1:744336/149‑1 (MQ=255) tGATACAAAACGGCATCGCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCAGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGttctt < 2:649080/149‑1 (MQ=255) gATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGttcttc < 2:979751/149‑1 (MQ=255) aTAGAAAAAGGAAACTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCTCAGTTCTTCa < 1:978762/149‑1 (MQ=255) ataaaaCGGCATCTCCGTAGAAAATAATAAAAAATGGGGGAAAAGTATATAACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATa < 1:433376/147‑1 (MQ=255) aCAAAACGGCATCTCCGTAGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATa < 2:577752/149‑1 (MQ=255) cAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATAc > 1:20747/1‑149 (MQ=255) aaaaCGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACa < 1:299694/149‑1 (MQ=255) caCGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATTACAGCGAGGCGAGGGGAGTTACCCGACCAGGAGCCGCGTAAC‑GGAGAAGCGGGTTACAGAACCATGCCGACAATATCGATTTTGCCCAGTTCTTCATACAgt < 2:298766/148‑1 (MQ=255) gCATCGCCGTGGAGAATGAGGAAAAGTGGGGGAAAAGTATAGCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGttt < 2:479256/149‑1 (MQ=255) aTCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGGGGTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCa > 1:735291/1‑149 (MQ=255) aTCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGGGTTTCa > 2:203586/1‑149 (MQ=255) ctcCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAAc < 1:992789/149‑1 (MQ=255) tcCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAAcc > 1:17763/1‑149 (MQ=255) gaactgggcaaaatcgatattgtccgcatggttctgtaactcgcttctccGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTa < 2:291186‑M1/39‑1 (MQ=255) gaactgggcaaaatcgatattgtccgcatggttctgtaactcgcttctccGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTa > 1:291186‑M1/51‑89 (MQ=255) gaATTAGGAAAAGTGGGGGAAAAGTAGATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGat < 1:255860/149‑1 (MQ=255) attaGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACACGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGatat < 2:390817/146‑1 (MQ=255) tagcaaaaGGGGGGGAAAAGGAGATCACAGCGAGGAGAGGGGAGTTATCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGa < 2:279932/145‑1 (MQ=255) gAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAAACTGCTCGATATGa > 1:976394/1‑149 (MQ=255) aaaaGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTATTCATAAAGTATTTCAACCTGCTCGATATGaattg > 2:286933/1‑145 (MQ=255) ggggAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTCAC‑GGGCAACCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTGCATCCAGTTTTTCAACCTGCTCGAGATGAGTCGCGTtgat > 1:839907/1‑149 (MQ=255) aaGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGCCAC‑GTAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATAAAGTGTTTCAACCTGCTCGATATGAGTGCCGTtgatagtgat > 1:196531/1‑149 (MQ=255) acaGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCgc > 2:543584/1‑148 (MQ=255) aGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGt > 1:43140/1‑149 (MQ=255) taactcgcttctccgttacccggctcctggtcgggtaacGGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGttc > 1:291186‑M2/40‑89 (MQ=255) taactcgcttctccgttacccggctcctggtcgggtaacGGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGttc < 2:291186‑M2/50‑1 (MQ=255) agGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATCCCGAGTGGTAGTTGc > 2:960704/1‑149 (MQ=255) gggAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCt > 2:936588/1‑149 (MQ=255) gggAGGTACACGACCAGGAGCCGGATAAC‑GGAGCAGCGCGGCACAAAACCATGCGGACAATATCGATCTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCt < 1:438714/149‑1 (MQ=255) ggAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGCTTTTGCCCAGTTCTTCATACAGTGTTTCAACCTACTCGATATGAGTGGCGTTGATAGTGATAGATAACGAGTGGTAGTTGCCtt > 1:314634/1‑149 (MQ=255) gaacctACCCGACCATGAACCAGATAAC‑AGAGAAGCGAGTAACAAAACCCCGCAGGAGTTGCCTATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTTCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCtt < 1:483022/144‑1 (MQ=255) tACCCGACC‑GGGGGCGGGTGACTGGAGAAGCGAGTTACAGAACCACTCGGACAATTTCGATTTTGCGCAGTTCTTCATACAGTATTTCAACTTGCGCGAGAGGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTtgctg < 2:113123/149‑1 (MQ=255) cccggctcctggtcgggtaacGGAGAAACGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAATTGCCTTTgctgct > 2:990492‑M2/22‑149 (MQ=255) aCGACAAGGAGCCGGGTAAC‑GGAGAAGTGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCtt > 1:183878‑M1/2‑149 (MQ=255) CGAGCAGGAGCCGGGGAAC‑GGATAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTg > 1:20025‑M1/1‑149 (MQ=255) GACCGGGAGCCGGGTAAC‑GTAGAAGCGAGTTACAGAACCAGGCGGACAATATCGATTTTACCCAGTTCTTCATACAGTGTTTCAACCTGCTCTATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTgg > 1:677869‑M1/1‑149 (MQ=255) aCCAGGAGCCGTGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGt < 1:597876/149‑1 (MQ=255) aCCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGt < 1:321025/149‑1 (MQ=255) aCCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGt < 1:284668/149‑1 (MQ=255) ccAGGTGCCGGGTAAT‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCTACCTGCTCGATATGAGTGGCTTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGtt < 2:823800/149‑1 (MQ=255) ggAGCGGGGTCAC‑TGAGTATCGAGTTACAGAATCAGGCGGACACTATCGATGTTGCCCAGTTCTTCATACAGTGTTTCAACTTGCGTGATATGTGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTa < 2:60798/149‑1 (MQ=255) ggAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTa < 1:372012/149‑1 (MQ=255) tgttgggtatcGGAGAAGCGAGTTACTGACCCATGCGGACAATATCGACTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGGGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTAcc < 1:317509‑M2/138‑1 (MQ=255) gTAAC‑GGAGAAGCGAGTTACAGAACGATGCGGACTATTTGACATTTGTCCAGTTCTTCATACAATCTTTAGTTTTTCTCGAACTGATTCCCTGCTAGAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTACCGTTggg < 1:990492/149‑1 (MQ=255) ggAGAAGCGAGTTACAGAACCATGCGGACCACCCGGCATTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTACCGTTGGGGTGTa > 2:216605/1‑149 (MQ=255) | GAGATTGGCTCGTAAGGCTGAAGACCGAGCTGGCGGACAAGAATTTTATCCTGATACAAAACGGCATCTCCGTGGAGAATGAGTAAAAGTGGGGGAAAAGTATATCACAGCGAGGAGAGGGGAGTTACCCGACCAGGAGCCGGGTAAC‑GGAGAAGCGAGTTACAGAACCATGCGGACAATATCGATTTTGCCCAGTTCTTCATACAGTGTTTCAACCTGCTCGATATGAGTGGCGTTGATAGTGATAGATACCGAGTGGTAGTTGCCTTTGCTGCTTGGTTTTACCGTTGGGGTGTA > NC_000913_3_hsa_pgi/662220‑662516 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |