New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	993282 =	38 (0.710)	3 (0.060)	3/262	NT	7.6%	coding (763/768 nt)	ssuB	aliphatic sulfonate ABC transporter ATPase
	?	NC_000913_3_hsa_pgi	993296 =	36 (0.700)					coding (749/768 nt)	ssuB	aliphatic sulfonate ABC transporter ATPase

AATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTAACAGCACCCG  >  NC_000913_3_hsa_pgi/993150‑993441                                                                                                                                                   |                                                                                                                                                  aaTGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTTAGGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGGATATACCCCTGTTTTCTCAGGCGa                                                                                                                                                 >  1:641318/1‑149 (MQ=255)       gggaaaaattggtctggatttgacagtggatatcccccgtccgcgtcgattagggtcggtgcgattagcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTCa                                                                                                                                           >  1:768961‑M1/127‑149 (MQ=255)                          aaaGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCACATTCCACACGTTGCATCa                                                                                                                        >  2:183037/1‑149 (MQ=255)                                  ggAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGc                                                                                                                <  1:302428/149‑1 (MQ=255)                                        tctctcTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCAGAATTCATAGTCACCACGTTGCATCACCCGTTGCAACAcc                                                                                                          >  1:525821/1‑149 (MQ=255)                                              tGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCATTTCAACACCCCCGCt                                                                                                    >  2:625368/1‑149 (MQ=255)                                                  gATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATTGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCa                                                                                                <  1:308180/149‑1 (MQ=255)                                                      tGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTc                                                                                            >  1:720614/1‑149 (MQ=255)                                                      tGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAAATTCACCACGTTGCATCCCCCGTTGCAACACCTCCGCTTCCAGccc                                                                                            >  2:356101/1‑147 (MQ=255)                                                         aCGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGc                                                                                         <  2:304446/149‑1 (MQ=255)                                                                 aTAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCa                                                                                 <  2:855597/149‑1 (MQ=255)                                                                 aTAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTAACAACGTTGCATCACCCGTTGCAAAACATCCGCTTCCAGCTCAGCTAATCGCa                                                                                 >  1:874904/1‑149 (MQ=255)                                                                   aaCTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCAcc                                                                               <  2:742393/149‑1 (MQ=255)                                                                   aaCTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCAcc                                                                               >  1:606451/1‑149 (MQ=255)                                                                    aCTAAAGCACTGGCTTGATAAATAACCGAATGGGAGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGCTTCAGATTCACCACGTTACATCACCCGTTGCAACACATCCGCTTCACGCTCCACTAATCGCACCg                                                                              >  2:563746/1‑149 (MQ=255)                                                                          gcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTc                                                                                                                                            <  2:146597‑M1/22‑1 (MQ=255)                                                                          gcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTc                                                                                                                                            >  1:146597‑M1/60‑81 (MQ=255)                                                                            aCTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAACTCCGCTAATCGCACCGCCCCTAAt                                                                      >  2:459402/1‑149 (MQ=255)                                                                             cTGGCTTGATAAATAATCGAATGGCGGCAATTGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATc                                                                     <  1:554267/149‑1 (MQ=255)                                                                                    gATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCa                                                                                                                           <  1:527665/88‑1 (MQ=255)                                                                                    gATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCa                                                                                                                           >  2:527665/1‑88 (MQ=255)                                                                                     ataaataaCCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGa                                                             >  1:965632/1‑149 (MQ=255)                                                                                          taaCCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACgggg                                                        <  2:829278/149‑1 (MQ=255)                                                                                             ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                                          <  2:173313/64‑1 (MQ=255)                                                                                             ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                                          <  2:174626/64‑1 (MQ=255)                                                                                             ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                                          >  1:174626/1‑64 (MQ=255)                                                                                             ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                                          >  1:173313/1‑64 (MQ=255)                                                                                               gAATGGCGTCAAGAGCGCCTCCATCCGGGGAAGTTACCCCTTTTTTCTCACGCGAGTTTCACATTGACCACGTTGAATCACCCGTTGCAACACTTCCGCTTCCATCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGatat                                                   <  2:278362/149‑1 (MQ=255)                                                                                               gAATGGCGGCGCTATTGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGCGACGGACGGGGGatat                                                   >  2:940879/1‑149 (MQ=255)                                                                                               gAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGatat                                                   >  1:518575/1‑149 (MQ=255)                                                                                                  tGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCGCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCa                                                <  1:44786/149‑1 (MQ=255)                                                                                                    gcggcAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACt                                              <  2:605412/149‑1 (MQ=255)                                                                                                    gcggcAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATAGCACCGACCCTAATCGACTCGGACGGGGGAAATCAAca                                              >  1:305840/1‑148 (MQ=255)                                                                                                          aTAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCGCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCaaa                                        <  1:623116/149‑1 (MQ=255)                                                                                                                   gtagttggggATTTTTCCCCGTTTGTCTGAGGGTCGTTTCAGGTTCACCTCGTTGCCGCACCCGTTGCAACACCTCCGCGCCTAGCTCCGCTAATCGCACCGACCCGTATCGACGCTGACGGGGGATATCCACTGTCAAATCCAGACCa                               <  2:192206/143‑1 (MQ=255)                                                                                                                           ggAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAAt                                                                                     >  1:976823/1‑87 (MQ=255)                                                                                                                           ggAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAAt                                                                                     <  2:976823/87‑1 (MQ=255)                                                                                                                           ggAATTTACCCCTGTTTTCCCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTcc                       <  2:284238/149‑1 (MQ=255)                                                                                                                            tgaaactcgcctgagaaaacaggCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTccc                      >  1:768961‑M2/24‑149 (MQ=255)                                                                                                                             gaaactcgcctgagaaaacaggCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGc                                                                                         >  1:146597‑M2/23‑81 (MQ=255)                                                                                                                             gaaactcgcctgagaaaacaggCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGc                                                                                         <  2:146597‑M2/59‑1 (MQ=255)                                                                                                                                 gaCCCCTGTTTTCTCAGGCGAGTTTCAGATTCACTACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTc                 <  2:982274/148‑1 (MQ=255)                                                                                                                                     CCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATACCATGATTTATCCAGACCAATTTTTCCCTCTTCAAtt             >  2:720614‑M1/1‑149 (MQ=255)                                                                                                                                       TGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTaa           >  1:43117‑M1/1‑149 (MQ=255)                                                                                                                                         ttttCTCAGGGGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTAACa         <  1:258192/149‑1 (MQ=255)                                                                                                                                             ctcAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACgggg                                                        <  2:362942/98‑1 (MQ=255)                                                                                                                                             ctcAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACgggg                                                        >  1:362942/1‑98 (MQ=255)                                                                                                                                                aggCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTAACAGCACCCg  >  2:804091‑M2/4‑149 (MQ=255)                                                                                                                                                aggCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTAAGCTAATTGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTAACAGCACCCg  >  1:944597‑M2/4‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                  AATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATTAACAGCACCCG  >  NC_000913_3_hsa_pgi/993150‑993441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.