New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 1425331	67 (1.190)	10 (0.190)	10/270	4.8	12.9%	intergenic (+92/‑46)	trkG/ynaK	Rac prophage; potassium transporter subunit/Rac prophage; conserved protein
	?	NC_000913_3_pae_pgi	= 1425343	71 (1.320)					intergenic (+104/‑34)	trkG/ynaK	Rac prophage; potassium transporter subunit/Rac prophage; conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCTTGAAATTTATCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGA  >  NC_000913_3_pae_pgi/1425184‑1425480                                                                                                                                                    |                                                                                                                                                       gtcTTGAAATTTTGTCTGTTATTATTTTGTTTTGAGGTTTTTTTTGGCGCTTCTAATATATGGCTGATTTATAATTGTTAGTTTAATATTATGTTGACTCACTTATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTa                                                                                                                                                      <  2:241791/148‑1 (MQ=255)      aaaaTTTATCCTGTTATTATATTGTTTTCAGGGTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATCCCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACt                                                                                                                                                 <  1:828225/149‑1 (MQ=255)        aaTTTATCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTgg                                                                                                                                               <  2:78301/150‑1 (MQ=255)              tCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGctgctg                                                                                                                                         >  1:533445/1‑150 (MQ=255)                cTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTggg                                                                                                                                       <  1:836939/150‑1 (MQ=255)                cTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTggg                                                                                                                                       <  2:778756/150‑1 (MQ=255)                       tataTTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGTCGTAGACATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGtt                                                                                                                                <  1:963676/150‑1 (MQ=255)                       tataTTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGACTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGtt                                                                                                                                <  1:932227/150‑1 (MQ=255)                           ttGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTACCCAGTAGCACTGCCTGTTAGGCTTCTTTTTAt                                                                                                                            >  2:102942/1‑150 (MQ=255)                           ttGTTTTCAGGTTTTTTTTGGCGATCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTAt                                                                                                                            <  2:117079/150‑1 (MQ=255)                                          ttttGGCGCTCCTAATTTATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                             <  2:469687/150‑1 (MQ=255)                                            ttGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGt                                                                                                           >  2:640175/1‑150 (MQ=255)                                                ggcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGa                                                                                                       <  2:233392/149‑1 (MQ=255)                                                cgcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGa                                                                                                       <  2:104284/150‑1 (MQ=255)                                                 gcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACTACCTTTACATCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATgcg                                                                                                      >  2:846019/1‑148 (MQ=255)                                                  cTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGc                                                                                                     <  2:870970/150‑1 (MQ=255)                                                   tCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCg                                                                                                    >  1:405400/1‑150 (MQ=255)                                                     cTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                  >  2:188673/1‑150 (MQ=255)                                                      tAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgagg                                                                                                 >  2:848961/1‑149 (MQ=255)                                                               gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                               >  2:282940/1‑127 (MQ=255)                                                               gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                               <  1:282940/127‑1 (MQ=255)                                                               gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGa                                                                                        >  2:118068/1‑150 (MQ=255)                                                                  gATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGGGAGATTGAAGATAg                                                                                     >  1:560219/1‑150 (MQ=255)                                                                        taATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATc                                                                               >  2:959195/1‑150 (MQ=255)                                                                             gtgAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTaaa                                                                                          <  1:977627/134‑1 (MQ=255)                                                                             gtgAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTaaa                                                                                          >  2:977627/1‑134 (MQ=255)                                                                                  tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                               <  2:553314/108‑1 (MQ=255)                                                                                  tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                               >  1:553314/1‑108 (MQ=255)                                                                                  tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGCAATTAAAGATAGTCTATCGCCCAtttag                                                                     >  2:493688/1‑147 (MQ=255)                                                                                  tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                     >  1:430543/1‑150 (MQ=255)                                                                                   ttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACaa                                                                    <  2:820124/150‑1 (MQ=255)                                                                                   ttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACaa                                                                    <  2:533445/150‑1 (MQ=255)                                                                                    tAATATTATGTTGACTCACTTATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAg                                                                   <  2:571686/150‑1 (MQ=255)                                                                                      atatTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTACCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAAGCTGTATGAGCGAGAAATTAAAAATATTATATCCACCAATACAaaaa                                                                 >  1:214734/1‑150 (MQ=255)                                                                                        attatGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                     <  1:912226/144‑1 (MQ=255)                                                                                        attatGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                     >  2:912226/1‑144 (MQ=255)                                                                                            tGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                  <  1:93753/111‑1 (MQ=255)                                                                                            tGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                  >  2:93753/1‑111 (MQ=255)                                                                                              ttGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAACACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGACATTAAAGATAGTCTATCGCCCACTCCAACAATTGTcccc                                                         >  2:364405/1‑150 (MQ=255)                                                                                                gACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGAGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGt                                                       <  1:890405/150‑1 (MQ=255)                                                                                                     actcaTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAAATAGTCTATCGCCCATTACAAGAATTGTCACCGGATgcg                                                  >  1:764599/1‑150 (MQ=255)                                                                                                     actcaTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGATGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTGTATCGCCCATTACAGGAATTGTCACCGTGTgcg                                                  >  2:762344/1‑150 (MQ=255)                                                                                                         aTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                             <  2:346976/87‑1 (MQ=255)                                                                                                         aTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                             >  1:346976/1‑87 (MQ=255)                                                                                                          ttGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTTTGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACaa                                             <  1:334159/150‑1 (MQ=255)                                                                                                               ccAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑Ca                                       <  1:118068/150‑1 (MQ=255)                                                                                                                cAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAg                                      <  1:457910/150‑1 (MQ=255)                                                                                                                  aTACCTAACTTTACCAGCAACACCGTCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGa                                    <  2:643312/150‑1 (MQ=255)                                                                                                                   tACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGAc                                   <  1:848451/150‑1 (MQ=255)                                                                                                                   tACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGAc                                   <  2:814948/150‑1 (MQ=255)                                                                                                                      cTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGca                                >  1:888336/1‑150 (MQ=255)                                                                                                                             tACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACt                         >  1:418648/1‑150 (MQ=255)                                                                                                                             tACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACt                         <  1:613735/150‑1 (MQ=255)                                                                                                                              aCCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTg                        <  1:640175/150‑1 (MQ=255)                                                                                                                               ccAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGa                       >  1:609173/1‑150 (MQ=255)                                                                                                                               ccAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGa                       <  2:418648/150‑1 (MQ=255)                                                                                                                                cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACACCGC‑CAGGACGCACAGTACTGAg                      >  1:416131/1‑150 (MQ=255)                                                                                                                                cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAg                      >  2:32390/1‑150 (MQ=255)                                                                                                                                cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGACTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACACGAATTGTCACCGTTTGCGC‑CCACGCACAGGACGCACCGTACTgtg                      >  2:955390/1‑148 (MQ=255)                                                                                                                                       acCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTgg               >  2:125055/1‑150 (MQ=255)                                                                                                                                       acCTCCGTCCCCAGTAACACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTgg               >  1:859797/1‑150 (MQ=255)                                                                                                                                         cTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGTTGGca             >  2:271979/1‑150 (MQ=255)                                                                                                                                         cTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGca             >  2:845489/1‑150 (MQ=255)                                                                                                                                            cGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATACAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTCATGAGCAGGTGGCACaa          >  2:818590/1‑150 (MQ=255)                                                                                                                                                 ccAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGt     <  1:859503/150‑1 (MQ=255)                                                                                                                                                  cAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAAGTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTa    <  1:188673/150‑1 (MQ=255)                                                                                                                                                    gTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGCAATAAAAGATCGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCCCAGTACTGAGCAGGTGGCACAACTGGTAGa  >  1:38693/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                       GCCTTGAAATTTATCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGA  >  NC_000913_3_pae_pgi/1425184‑1425480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.