| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_pgi | 3635047 | 3653122–3652030 | 16984–18076 | 34 [0] | [5] 8 | [yhiM]–[insH1] | [yhiM],yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,[insH1] |
CGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGC > NC_000913_3_pae_pgi/3634903‑3635193 | cgcgTTAGGTGGCTTGGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaag < 2:140498‑M1/149‑6 (MQ=255) ggTGGCTTTGTGCAGGAAAGTTCAGGCCAAAGCGAGTATTTCGTCGCGGGACATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaa > 1:423894‑M1/1‑137 (MQ=255) tGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaata > 1:436263‑M1/1‑135 (MQ=255) tGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGACGCGGGTCATGTGCTGATTTCTCTGGCGGCCAGATGCCTGGCATTATTCACTACCGCGTTTATTATCATTTCGCCGCTCGCGCCCGGCGTTAAggaaggtgcgaata > 1:244081‑M1/1‑135 (MQ=255) tttGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcg < 1:300871‑M1/149‑19 (MQ=255) tttGTGCTGGAAAGCTCATGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcg < 2:377015‑M1/149‑19 (MQ=255) tgtgCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggg < 1:208506‑M1/149‑21 (MQ=255) gCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaa > 2:334054‑M1/1‑126 (MQ=255) cTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaa < 1:498583‑M1/149‑25 (MQ=255) ttCAGGGCAAAGCGAGTCTTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctc < 1:490656‑M1/149‑33 (MQ=255) cAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATATATTATCCTTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgac < 2:306375‑M1/149‑40 (MQ=255) aaGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgaccc > 2:247662‑M1/1‑108 (MQ=255) aGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactca < 2:338271‑M1/149‑43 (MQ=255) aGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactca < 2:354844‑M1/149‑43 (MQ=255) gTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat < 1:334054‑M1/149‑48 (MQ=255) cgcgGGTCATGTTCTTATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct < 1:462561‑M1/149‑57 (MQ=255) aTGTGCTGATTTCTGTGGCGGCCATATGGCTGGCATGATTCACTTCCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 2:395599‑M1/149‑65 (MQ=255) aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 2:298522‑M1/1‑85 (MQ=255) aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcgg > 1:28675‑M1/1‑85 (MQ=255) aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcgg < 2:28675‑M1/119‑35 (MQ=255) aTGGGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 2:299584‑M1/149‑65 (MQ=255) gtgCTGATTTCTCTGACAGCCAGGTTCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 1:10115‑M1/149‑67 (MQ=255) cTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc > 2:363600‑M1/1‑80 (MQ=255) gcggcCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc > 1:283962‑M1/1‑68 (MQ=255) gcggcCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttcccggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc > 1:260089‑M1/1‑68 (MQ=255) gcCATATGCCTTGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt < 2:222296‑M1/149‑85 (MQ=255) ccTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatatacgctggtttgagccgattttttctcccgtaaatgcct < 1:510737‑M1/149‑93 (MQ=255) aCTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt > 2:429008‑M1/1‑44 (MQ=255) aCTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 1:429008‑M1/106‑63 (MQ=255) ccGCATTTATTATCATTTCGCAGCTCACGCGCGGTGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag > 1:243985‑M1/1‑40 (MQ=255) atCATTTCGAAGCTCACGCGCGGCGTTAAggaaggtgcgaataagccgggaaattcttctcggctgactcagtcatttcattgcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc < 2:363758‑M1/149‑121 (MQ=255) tCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg > 1:185102‑M1/1‑16 (MQ=255) aCGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttagccatgtaaggcggt > 1:197086‑M1/1‑14 (MQ=255) aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:162598‑M1/1‑2 (MQ=255) | CGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGC > NC_000913_3_pae_pgi/3634903‑3635193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |