New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 781577 =48 (0.660)29 (0.400)
+G
6/292 7.2 50.2% noncoding (1/76 nt) lysQ tRNA‑Lys
?NC_000913 = 2521129 10 (0.140)intergenic (+3/‑44) valX/valY tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

TCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA  >  NC_000913/2520985‑2521238
                                                                                                                                                |                                                                                                             
tCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTtctc                                                                                                           <  1:437435/149‑1 (MQ=255)
   aTCCCGTCATCACCCACCACCTACTTTATGTAGTATACGCCGTGTAGCAATTAATTGAGAAGAGTTTGATTAACTCAGCTGGGACAGCACCTCCCTTAAAAGGAGTGGGGAGGCGGTTAGATCCCGTCATCCCACACCACttacaaaca                                                                                                        >  2:459618/1‑142 (MQ=16)
    tCCCGTCATCACCCACCAAGTACTATAGTTAGAATACGAGGTGTAGCAAGAAAATGAGAAGTGCGTGATTAGCTCAGAGTGGAGAGCACCTCCCTTACAAAGAGTGGGTCGCGGGTTCGATCCCGTCATCACCCACCACattagataca                                                                                                       >  2:523883/1‑142 (MQ=12)
                 caccaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCCCCACTATCTCGCCAGCTCAAtttgtgg                                                                                          >  1:1073455/1‑145 (MQ=255)
                  accaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCCTCATCACCAACCACATTCTCGCGAGCTAAATTTCTTGt                                                                                         >  1:406686/1‑149 (MQ=255)
                                      tcCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTACGCTCGAGCGATATTTCTTTTGAACAGGTGACGttaattcc                                                                     >  1:172780/1‑142 (MQ=17)
                                           cgTGTAGCAAGAACTTGAGCCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGt                                                                <  1:879782/149‑1 (MQ=255)
                                            gtgtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAAtgt                                                                                 <  1:507832/131‑1 (MQ=255)
                                            gtgtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAAtgt                                                                                 >  2:507832/1‑131 (MQ=255)
                                              gtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACttc                                                                                                              >  1:873807/1‑99 (MQ=255)
                                              gtAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACttc                                                                                                              <  2:873807/100‑2 (MQ=255)
                                                                                   gggAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCCCCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTACGCTGGGAGAGCGCCGCCCTTACATGGAggg                        >  1:405600/1‑149 (MQ=37)
                                                                                                         gaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTATATGTGTTGTAAAAATGTGAAGTACAGAAGTGTGTTCGTAGCTCCGCTGCGAGCGCGCCACCCGTAAAAGAAGGGGGTCCGCGGTTCGAGCACGtaa  >  2:574525/1‑147 (MQ=19)
                                                                                                                                                |                                                                                                             
TCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCA  >  NC_000913/2520985‑2521238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.