New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1096961 =	69 (1.310)	3 (0.090) +GGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGA	3/182	5.6	8.0%	intergenic (+132/+604)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
	?	NC_000913	1097065 =	38 (0.720)					intergenic (+236/+500)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG  >  NC_000913/1096921‑1097204                                                                                                                                                 |                                                                                                                                            gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACCCGCTTCGCCCGCCCTGCGGGCAGcc                                                                                                                                         >  1:159434/1‑149 (MQ=255)  cACGATGGCCCCTCGCCCTAACAGAAGTAAACGGGGGCACCAAGTGTGAAGAATATACGAAAAAAATGCCCGTACTTTCGTATGAGCTCTTTGTTAAATTTGGCGGGGAGGTGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc                                                                                                                                        >  2:416049/1‑149 (MQ=14)          ccccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTg                                                                                                                                >  2:675840/1‑149 (MQ=255)            ccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCg                                                                                                                              <  1:797370/149‑1 (MQ=255)             cTCGCCCGAACAGTCGGGGGCGGGGGAACCCGGCGTGTGCAATATACGAAAAAAAAGCCCGTACTGTGGTACGAGCTCTTCTTTATATATTGCGGGGATGGGTGGATTGACGCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                                                                                                                             <  2:451172/149‑1 (MQ=14)              tCGCCCTACCCGACGTGGGCGGGGGCACCCGTTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGtt                                                                                                                            <  1:710389/149‑1 (MQ=255)                  ccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                                                                        >  1:741056/1‑149 (MQ=255)                   cTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACgg                                                                                                                       <  1:509379/149‑1 (MQ=255)                    tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                                                                        <  2:233452/147‑1 (MQ=255)                    tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                                                                        >  1:233452/1‑147 (MQ=255)                    tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                                                                      <  1:184217/149‑1 (MQ=255)                    tAACAGACGTGGGCGGGGGCACCCGGTGGGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                                                                      <  2:741056/149‑1 (MQ=255)                      aCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                                                                                    <  2:485775/149‑1 (MQ=255)                        aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCTCGTTCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                                                                                                                  <  1:123369/149‑1 (MQ=255)                                 cGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc                                                                                                         <  1:887048/149‑1 (MQ=35)                                     ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCAGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACAGGCTGTc                                                                                                     <  2:915701/149‑1 (MQ=17)                                                            gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg                                                                              >  2:533814/1‑149 (MQ=32)                                                            gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg                                                                              <  1:51865/149‑1 (MQ=32)                                                              aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgggg                                                                            <  1:533814/149‑1 (MQ=32)                                                              aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGACGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCACCGCGCTTACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgggg                                                                            <  2:338/149‑1 (MQ=11)                                                                    aGCCTGTAGTTTGGTGCGGGCTCCTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCTCGCCCTGCGGGCATCCCGCTCACTGCGTTCCCGGTCTGTCCAACTGTCTGTCTCCAGTTGTCGCCCCCCGGTCGGGGCTtctc                                                                      <  2:530889/149‑1 (MQ=11)                                                                       ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATc                                                                   >  1:427790/1‑149 (MQ=32)                                                                             tttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCg                                                             >  1:787537/1‑149 (MQ=32)                                                                                             cttTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACg                                             >  2:805591/1‑149 (MQ=35)                                                                                              tttAAATATGGCGGTGCGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAAAATCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGa                                            >  1:127200/1‑149 (MQ=255)                                                                                                     atGGCGGTGAGGGGGGGATTGACTCGCTTCGCCCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaaaaaa                                     <  1:675840/149‑1 (MQ=25)                                                                                                         cGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGccc                                 <  1:805591/149‑1 (MQ=35)                                                                                                         cGGTGAGGGGGGAATTGACTCGCTTCGCCCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGccc                                 <  1:644854/149‑1 (MQ=25)                                                                                                                  ggggATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCgg                                                            >  1:234970/1‑113 (MQ=33)                                                                                                                           cTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGctc               >  2:48397/1‑149 (MQ=35)                                                                                                                                 tcgctcgcCCGGCGGGCAGCCTGCTCACTGCGTTCACGGTCTGTCCAAGTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCttt         <  2:590504/149‑1 (MQ=255)                                                                                                                                 tcgcgcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATAAACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCttt         <  2:127200/149‑1 (MQ=17)                                                                                                                                   gctcgcCCTGCGGCCAGCCCGCTCACGGCTTTCACGGTCTGTCCAGGAGGCTTTGGCCAGTTGCGGACCCCCGGTCGGGGCTTCTCATCCCCCGGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa       <  1:583900/149‑1 (MQ=11)                                                                                                                                       gcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCTGTACTTTCGTACGAGCTCTTCTTTAAatat   <  1:48397/149‑1 (MQ=25)                                                                                                                                        cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCgg                                                            >  1:764222/1‑91 (MQ=34)                                                                                                                                        cccTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCgg                                                            <  2:764222/91‑1 (MQ=33)                                                                                                                                        cccTGCGGGCAGCCCGCGCACGGCGTTCACGGTCTGCCCAACTGGCTGTCGCCAGTTGTCGACACCCGGTCGGGGCTTCCCCTCCCTCCAGTGTGTGCCATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATg  <  1:818875/149‑1 (MQ=11)                                                                                                                                              gggCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAatat   >  2:6414/1‑142 (MQ=35)                                                                                                                                                 |                                                                                                                                            GCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATG  >  NC_000913/1096921‑1097204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.