BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3662289 =	185 (1.770)	6 (0.060)	6/260	3.5	4.1%	coding (1876/3114 nt)	mdtF	multidrug efflux pump RND permease MdtF
*	?	NC_000913	= 3848573	112 (1.160)	6 (0.060)	6/260	3.5	4.1%	coding (52/1320 nt)	uhpC	inner membrane protein sensing glucose‑6‑phosphate
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

CGGCTGAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCACCCAG  >  NC_000913/3848434‑3848708

cgtcTGAGAACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAATCTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATTTGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCatat                                                                                                                                        <  2:866585/138‑1 (MQ=255)

cGGCTGAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCatat                                                                                                                                        <  2:1729622/141‑1 (MQ=255)

cGGCTGAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCatat                                                                                                                                        <  2:495816/141‑1 (MQ=255)

 ggCTGAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATAtt                                                                                                                                       >  1:1911739/1‑141 (MQ=255)

     gAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATc                                                                                                                                   <  1:991897/141‑1 (MQ=255)

     gAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATc                                                                                                                                   <  1:930555/141‑1 (MQ=255)

     gAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATc                                                                                                                                   <  1:1888749/141‑1 (MQ=255)

     gAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATc                                                                                                                                   >  1:1411519/1‑141 (MQ=255)

      aGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCa                                                                                                                                  <  1:1400391/141‑1 (MQ=255)

       gCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAg                                                                                                                                 <  2:874861/141‑1 (MQ=255)

       gCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAg                                                                                                                                 >  2:77603/1‑141 (MQ=255)

       gCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAg                                                                                                                                 >  2:77540/1‑141 (MQ=255)

          cGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCa                                                                                                                              >  1:253978/1‑141 (MQ=255)

          cGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCa                                                                                                                              >  1:254006/1‑141 (MQ=255)

            ccGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCAtt                                                                                                                            >  1:318805/1‑141 (MQ=255)

            ccGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCAtt                                                                                                                            >  1:161021/1‑141 (MQ=255)

               ttAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAAt                                                                                                                         >  2:920173/1‑141 (MQ=255)

                tAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATg                                                                                                                        <  1:251936/141‑1 (MQ=255)

                      ggttttCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCAt                                                                                                                  >  2:1518504/4‑141 (MQ=255)

                      ggATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCAt                                                                                                                  >  1:1361816/1‑141 (MQ=255)

                      ggATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCAt                                                                                                                  <  1:1112614/141‑1 (MQ=255)

                        aTTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGGGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTACATATTTATCAGTCATTAATGGCGCATCg                                                                                                                >  1:1878359/1‑141 (MQ=255)

                          ttCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGc                                                                                                              >  1:1463211/1‑141 (MQ=255)

                              ggTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGAATCGGCAGgc                                                                                                          >  2:309512/1‑141 (MQ=255)

                              ggTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGAATCGGCAGgc                                                                                                          >  2:308815/1‑141 (MQ=255)

                               gTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGgcg                                                                                                         <  1:878513/141‑1 (MQ=255)

                                tACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGgcgc                                                                                                        <  2:655421/141‑1 (MQ=255)

                                tACGGCGGAGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGgcgc                                                                                                        <  2:445219/141‑1 (MQ=255)

                                        cgTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGaa                                                                                                <  1:1374506/141‑1 (MQ=255)

                                         gTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGaaa                                                                                               <  2:481332/141‑1 (MQ=255)

                                              aaCTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCa                                                                                          >  2:844516/1‑141 (MQ=255)

                                              aaCTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCa                                                                                          >  2:844545/1‑141 (MQ=255)

                                                 ttttCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAAca                                                                                       >  1:220701/1‑141 (MQ=255)

                                                 ttttCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAAca                                                                                       >  1:931757/1‑141 (MQ=255)

                                                   ttCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCTGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAAcatc                                                                                     >  2:640859/1‑141 (MQ=255)

                                                   ttCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAAcatc                                                                                     >  1:1492728/1‑141 (MQ=255)

                                                   ttCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAAcatc                                                                                     >  2:1276399/1‑141 (MQ=255)

                                                       gcgTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACAtcatca                                                                                 <  1:1851271/141‑1 (MQ=255)

                                                         gTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCaaa                                                                               <  1:1237788/141‑1 (MQ=255)

                                                           gAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAAcc                                                                             <  2:1152810/141‑1 (MQ=255)

                                                           gAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAAcc                                                                             <  2:141293/141‑1 (MQ=255)

                                                             aGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCtt                                                                           <  2:8977/141‑1 (MQ=255)

                                                             aGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCtt                                                                           <  2:1144272/141‑1 (MQ=255)

                                                              gTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTa                                                                          <  2:121494/141‑1 (MQ=255)

                                                                   aCAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACAt                                                                     <  2:1765792/141‑1 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  1:996428/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  2:1804039/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  2:1803984/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  1:1458786/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  1:1458789/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  2:283239/1‑141 (MQ=255)

                                                                      gcgcGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGc                                                                  >  1:1717091/1‑141 (MQ=255)

                                                                        gcgTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGt                                                                >  2:1568834/1‑141 (MQ=255)

                                                                        gcgTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGt                                                                >  2:1568777/1‑141 (MQ=255)

                                                                         cgTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGtt                                                               <  1:920173/141‑1 (MQ=255)

                                                                         cgTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGtt                                                               <  1:1816756/141‑1 (MQ=255)

                                                                            aaCCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAg                                                            <  1:735258/141‑1 (MQ=255)

                                                                              cccAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGt                                                          <  1:474439/141‑1 (MQ=255)

                                                                                     agATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGaaa                                                   <  2:632406/141‑1 (MQ=255)

                                                                                          gTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCATTTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTg                                              <  1:753876/141‑1 (MQ=255)

                                                                                          gTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTg                                              >  1:709788/1‑141 (MQ=255)

                                                                                                        ccGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGcgtgccgtg                                >  1:784561/1‑141 (MQ=255)

                                                                                                        ccGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGcgtgccgtg                                >  1:1807392/1‑141 (MQ=255)

                                                                                                        ccGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGcgtgccgtg                                >  1:1807448/1‑141 (MQ=255)

                                                                                                           aCGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAg                             >  2:60459/1‑141 (MQ=255)

                                                                                                           aCGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAg                             >  1:1413827/1‑141 (MQ=255)

                                                                                                                aGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAgg                        <  2:1911739/141‑1 (MQ=255)

                                                                                                                  tAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaa                      <  1:1269145/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  2:1304445/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  2:1057203/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1712223/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1522344/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1522335/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1522295/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTGTCAGAAACGGCAACCTCATCAAACCTTCGACATAGCGTGGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1067117/141‑1 (MQ=255)

                                                                                                                   aGCGATAGCGGGCATCAATGTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGaaa                     <  1:1067099/141‑1 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1881668/1‑141 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1623049/1‑141 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1623774/1‑141 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1480316/1‑141 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1480034/1‑141 (MQ=255)

                                                                                                                      gATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAAtgt                  >  1:1841636/1‑141 (MQ=255)

                                                                                                                        tAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGACACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATgtgt                <  2:1395706/141‑1 (MQ=255)

                                                                                                                        tAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATgtgt                <  1:844545/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCCATGTCCTATCGATCAGTCATTAATCGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:1007453/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:652489/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:1189445/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:1424405/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:1678290/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  2:1239461/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  2:712684/141‑1 (MQ=255)

                                                                                                                          gCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTaa              <  1:1678223/141‑1 (MQ=255)

                                                                                                                            gggCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAAtg            <  2:417909/141‑1 (MQ=255)

                                                                                                                              gCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAAtgtg          >  2:787547/1‑141 (MQ=255)

                                                                                                                               cATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGc         >  2:1517769/1‑141 (MQ=255)

                                                                                                                               cATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGc         >  2:1517770/1‑141 (MQ=255)

                                                                                                                                    aTTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCAccc    <  1:1925698/141‑1 (MQ=255)

                                                                                                                                      ttCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCACCCAg  >  2:687480/1‑141 (MQ=255)

                                                                                                                                      ttCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCACCCAg  >  2:687476/1‑141 (MQ=255)

                                                                                                                                      ttCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCACCCAg  >  2:559501/1‑141 (MQ=255)

CGGCTGAGCACGCCGTTAGCAAGGATTTCTGGTACGGCGGCGTTAAAACTTTTCCGCGTGAAGTAAAACAGCGCGTAACCCAGCCAGATGGTCAGCAGAATATGCCGACGCCAGTAGCGATAGCGGGCATCAATTTCATATTTATCAGTCATTAATGGCGCATCGGCAGGCGCTTTCAGAAACGGCAACATCATCAAACCTTAGACATAGCGTTGAGGTAGAGAAACGCTGACACGCGTGCCGTGCAGACAGGAAATGTGTAATGTGCCACCCAG  >  NC_000913/3848434‑3848708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.