| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4175464 | 121 (1.110) | 12 (0.180) +TCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGA |
5/170 | 2.9 | 14.1% | intergenic (+1/‑8) | thrU/tyrU | tRNA‑Thr/tRNA‑Tyr |
| ? | NC_000913 | 4175475 = | 122 (1.120) | noncoding (4/85 nt) | tyrU | tRNA‑Tyr | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4175373‑4175464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATA > NC_000913/4175475‑4175591 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| TGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAAT < 1:538781/141‑1TGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAAT < 1:539053/141‑1TGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAAT < 1:539058/141‑1 CGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGA > 1:572863/1‑141 GGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGC > 2:838524/1‑141 TGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCC > 1:1362117/1‑141 TGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCC > 1:1362121/1‑141 AATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTC > 1:1803156/1‑141 ACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAt < 2:1569911/141‑2 CCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAtg < 2:1612005/141‑3 CCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAtg < 2:1875089/141‑3 CCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAtg < 2:190134/141‑3 TCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGATGGTTCGAATCC > 1:439918/1‑141 TCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGATGGTTCGAATCC > 1:646581/1‑141 TCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGATGGTTCGAATCC > 1:649453/1‑141 GTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATA > 1:898539/1‑141 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| TGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4175373‑4175464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATA > NC_000913/4175475‑4175591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |