BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,730,908	0	A	T	28.4%	844.3 / inf	371	noncoding (250/1542 nt)	rrsG	16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (167/98); new base T (25/80); total (192/179)
Fisher's exact test for biased strand distribution p-value = 8.37e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 377 total aligned reads displayed.

CCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCG  >  NC_000913/2730810‑2731048

cccGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGaa                                                                                                    <  1:1267970/141‑1 (MQ=11)

cccGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGaa                                                                                                    <  2:1694832/141‑1 (MQ=11)

cccGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGaa                                                                                                    <  1:1596094/141‑1 (MQ=11)

cccGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGaa                                                                                                    <  1:772285/141‑1 (MQ=11)

 ccGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAg                                                                                                   >  2:254235/1‑141 (MQ=31)

           cTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCctct                                                                                         >  2:803734/1‑141 (MQ=32)

           cTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCctct                                                                                         >  1:368483/1‑141 (MQ=11)

             ggACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGAACGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCttt                                                                                       >  1:343852/1‑141 (MQ=17)

                  gtgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCt                                                                                  >  1:955326/1‑141 (MQ=32)

                  gtgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCt                                                                                  >  1:734177/1‑141 (MQ=32)

                  gtgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCt                                                                                  >  1:1368593/1‑141 (MQ=32)

                  gtgtCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTggccc                                                                                  >  1:757169/1‑138 (MQ=11)

                    gtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTg                                                                                >  2:1974729/1‑141 (MQ=32)

                    gtCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTggcccgt                                                                                <  1:1108303/141‑6 (MQ=11)

                    gtCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCtttctcccgt                                                                                <  1:1131081/141‑8 (MQ=2)

                       tcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGa                                                                             <  1:78621/141‑1 (MQ=32)

                       tcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCAAAGGTCCCCCTCTTTGGTCTTGCGa                                                                             >  1:1933031/1‑141 (MQ=17)

                       tcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGa                                                                             >  2:1894613/1‑141 (MQ=17)

                        cAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGAc                                                                            <  2:1793373/141‑1 (MQ=32)

                            tCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTa                                                                        >  1:1577561/1‑141 (MQ=34)

                              cAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATg                                                                      <  1:1309499/141‑1 (MQ=34)

                               aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGc                                                                     <  1:1768639/141‑1 (MQ=34)

                               aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGc                                                                     <  1:1664645/141‑1 (MQ=34)

                                   tgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTa                                                                 <  1:318454/141‑1 (MQ=34)

                                   tgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTa                                                                 <  1:1201407/141‑1 (MQ=34)

                                   tgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTa                                                                 <  1:1886273/141‑1 (MQ=34)

                                        ggTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGc                                                            >  1:498970/1‑141 (MQ=34)

                                        gatCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGc                                                            >  1:100175/3‑141 (MQ=21)

                                          tCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTGGGCATCATGCGGTATTAGCTa                                                          >  1:1442972/1‑141 (MQ=2)

                                             tCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCg                                                       <  2:779080/141‑1 (MQ=34)

                                             tCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGccatcg                                                       <  1:1748626/141‑6 (MQ=2)

                                             tCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCACACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGccatcg                                                       <  1:1245984/141‑6 (MQ=2)

                                                tctcAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGttt                                                    <  1:248077/141‑1 (MQ=2)

                                                  tcAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTcc                                                  >  2:850382/1‑141 (MQ=2)

                                                  tcAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTcc                                                  >  1:1867514/1‑141 (MQ=2)

                                                     gACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTTTGCGGTATTAGCTACCGTTTCCagt                                               >  2:924362/1‑141 (MQ=21)

                                                     gACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCagt                                               >  2:118979/1‑141 (MQ=34)

                                                     gACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCagt                                               >  2:527017/1‑141 (MQ=34)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTAt                                         <  1:459673/141‑1 (MQ=34)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1179180/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1027060/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1280205/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1600953/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1291692/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:707261/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:679986/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:536576/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:403692/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:386584/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1346034/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:354700/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:1522907/141‑1 (MQ=2)

                                                           cTAGGGATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTAt                                         <  1:334783/141‑1 (MQ=2)

                                                                gATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATccccc                                    <  1:1464410/141‑1 (MQ=34)

                                                                gATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATccccc                                    <  1:1536024/141‑1 (MQ=2)

                                                                gATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATccccc                                    <  1:1262535/141‑1 (MQ=2)

                                                                gATCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATccccc                                    <  1:1894713/141‑1 (MQ=2)

                                                                 aTCGTCGCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATccccca                                   >  2:1107557/1‑140 (MQ=2)

                                                                   cgtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTcc                                 >  2:1144838/1‑141 (MQ=34)

                                                                   cgtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTcc                                 >  2:1471576/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATcccccacat                                >  2:1373686/1‑137 (MQ=2)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATcccccacat                                >  2:1233947/1‑137 (MQ=21)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1941743/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:1424221/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1967272/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:581850/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:1076319/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:1413277/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1617703/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:241528/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:820319/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:321395/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:598209/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  1:1302847/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1062881/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1031341/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:402016/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:898365/1‑141 (MQ=34)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATcccccacat                                >  2:979672/1‑137 (MQ=11)

                                                                    gtcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTGTCCAATGGTTATcccccacat                                >  2:1300770/1‑137 (MQ=11)

                                                                    gtcgCCTAGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1742354/1‑141 (MQ=21)

                                                                    gtcgCCTAGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                >  2:1485175/1‑141 (MQ=21)

                                                                     tcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCAt                               >  2:666926/1‑141 (MQ=34)

                                                                     tcgCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATcccccacatc                               <  1:123443/141‑6 (MQ=2)

                                                                       gCCTTGGTGAGCCCTTACCTCACCAACTAGCTAATCCCACCTAGGCATATCCTGACGCGAGAGGCCCGAAGGTCCCCCTCTTTGGCCCGTAGGCATCATGCGGTATTAGCCATCGTTTCCAATGGTTATcccccacatcag                             <  1:1724424/141‑8 (MQ=2)

                                                                            ggTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAg                        <  1:1191158/141‑1 (MQ=34)

                                                                             gTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGc                       <  2:269054/141‑1 (MQ=35)

                                                                                 gCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTcc                   >  2:364937/1‑141 (MQ=37)

                                                                                 gCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTcc                   >  1:985831/1‑141 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTTTTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              <  2:878569/141‑1 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              <  2:423391/141‑1 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              >  1:834820/1‑141 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              <  2:1565014/141‑1 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              <  2:712570/141‑1 (MQ=37)

                                                                                      tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGAc              <  1:217189/141‑1 (MQ=37)

                                                                                      aaCCCCACCACCACGCTAATCCCATCTCGGCACACCCGATGGCAAGAGGCCCGACGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGATTTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCCGCCAGCTTCCCAGAc              <  2:59733/140‑1 (MQ=11)

                                                                                         cccACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACAtt           <  2:1910242/141‑1 (MQ=37)

                                                                                           caccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTAc         >  1:20069/1‑141 (MQ=37)

                                                                                           caccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTAc         >  1:931309/1‑141 (MQ=37)

                                                                                           caccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTAc         >  1:1022163/1‑141 (MQ=37)

CCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGCTTCCCAGACATTACTCACCCG  >  NC_000913/2730810‑2731048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`