Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,481,8200CA28.8% 189.9 / 23.0 112M119I (ATG→ATT) emrYtripartite efflux pump membrane subunit EmrY
Reads supporting (aligned to +/- strand):  ref base C (48/31);  new base A (0/32);  total (49/63)
Fisher's exact test for biased strand distribution p-value = 1.85e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 112 total aligned reads displayed.

AACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCC  >  NC_000913/2481687‑2481957
                                                                                                                                     |                                                                                                                                         
aaCCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAAcc                                                                                                                                    <  1:1961231/141‑1 (MQ=255)
   cGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCt                                                                                                                                 >  1:681325/1‑141 (MQ=255)
   cGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCt                                                                                                                                 >  2:2450955/1‑141 (MQ=255)
    gCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTg                                                                                                                                >  2:742589/1‑141 (MQ=255)
    gCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAAAGTTCTTTTTTCTGGAGGATAATTCCTTAATAATAAACTCTTTGACAGTGGAATTAACGGCCAAGCCATAAACCCCtc                                                                                                                                >  2:2254098/1‑140 (MQ=255)
     cccAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGa                                                                                                                               >  2:293066/1‑141 (MQ=255)
     cccAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGa                                                                                                                               >  2:293090/1‑141 (MQ=255)
        aaTATCGGCCCACATATCGGAGCTATAATCACGGTATTTGACCATATTGCCAGAGAATTTTTTCTTTTTTCTGGGGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACg                                                                                                                            <  1:936078/141‑1 (MQ=255)
             cGGCCCAATTTTCGGAGCTATAATCACGTTCATTTACAATATTGCAATAGAAATTGTTCTTTTTTCTGGCGTATAATTCCTAAATAATAAACTCTTTGACAGTGTATTTAACGGCCCCGCAATTAACCCCTGAACGActct                                                                                                                       <  2:1966705/141‑1 (MQ=255)
             cGGCCCAAATATCGGAGCGATAATCCCGGTAATTGACCATAATCCCAGAGAAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGActct                                                                                                                       <  2:149979/141‑1 (MQ=255)
              ggCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTa                                                                                                                      >  2:1026873/1‑141 (MQ=255)
              ggCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTa                                                                                                                      >  2:2060008/1‑141 (MQ=255)
                        tCGGAGCTTTAATCACGGTAATTTACAATAATGCAAGATAAATTTTTATTTTTTCTGGCGTATAATTCATTAATAATAAACTCTGTGACAGTGTAATTAACGGCCCCGCAATTAACCCCTTAACGACTCTAAAAAATATCa                                                                                                            <  2:852167/141‑1 (MQ=255)
                        tCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCa                                                                                                            >  1:2329152/1‑141 (MQ=255)
                        tCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCa                                                                                                            >  1:2329112/1‑141 (MQ=255)
                          gtaGCTATATTCACGTTCATTGACCATAATGCCATAGCAATTGTTATTTTTTCTGGCGGATATTTCCTTAATAATAAACTCTGTGACTGTGGAATTAACGGCCCCGCATTTAACCCCTGAACGACTCTAAAAAATATCAGc                                                                                                          <  2:2488517/139‑1 (MQ=255)
                          gtaGCGATAATCACGGTCATTGACCTTAATGCCATTGAAATTTTTTTTTTTTCTGGCGTATAATTCCTTAATAATAAACTCTGTTACAGTGTATTTAACGGCCCCGCCTTTAACCCCTGAACGACTCTAAAAAATATCAGc                                                                                                          <  2:2488466/139‑1 (MQ=255)
                          ggtgctaTAATCACGTTAATTTACCATAATGCCAGAGAAATTGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGTAATTAAGGGCCCCGCATTTAACCCCTGAACGACTCTAAAAAATATCAGc                                                                                                          <  2:2064298/135‑1 (MQ=255)
                                  aaTAACGGTCTTTGACCATAATGCCAGATAAAATGTTCTTTTTTCTGGGGTATAATTCATTAATAATAAACTCTGTTACAGTGGAATTAACGGCCCCGCCTTTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAg                                                                                                  <  2:1649402/141‑1 (MQ=255)
                                    taaCGGTAATTTACCATATTGCCAGAGCAAATGTTCTTTTTTCTGGCGTATAATTCCTTAATATTAAACTCTGTGACTGTGGATTTAAGGGCCCCGCAATTAACCCCTCAACGACTCTAAAAAATATCAGCACATCAAGAt                                                                                                <  2:364464/139‑1 (MQ=255)
                                    tCACGGTCTTTGACCATATTGCCAGAGAAATTGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGATTTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGAt                                                                                                <  2:2306548/141‑1 (MQ=255)
                                    tCACGGTCATGGACCATATGGCCAGACCAAATGTTATTTTTTCGGGCGTATAATTCATTAATAAAAAACTCTGGGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGAt                                                                                                <  2:2306472/141‑1 (MQ=255)
                                      aggttaaTTTACCAAAATGCCATAGAAAATTTTCTTTTTTCTGGCGTTTAATTCCTTAATAATAAACTCTTTGACTGTGTAATTAAGGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTg                                                                                              <  2:681038/135‑1 (MQ=255)
                                      aCGTTCATTTACCATAATGCCAGAGAAAATTTTATTTTTTCTGGCGTATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTg                                                                                              <  2:1629401/141‑1 (MQ=255)
                                      aCGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTg                                                                                              <  2:681325/141‑1 (MQ=255)
                                      aCGGTCATTGACCATAATGCCAGACCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACCGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTg                                                                                              <  2:1522428/141‑1 (MQ=255)
                                            tttGACAATAAGGCCAGAGCAATTGTTCTTTTTTCTGGCGTATATTACCTTAATAATAACCTCGGTGACAGGGGATTTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                                                                                        <  1:623398/140‑1 (MQ=255)
                                            aTTGACCATAATGCCAGAGAAAATGTTATTTTTTCTGGCGGATAATTCCTTAATAAAAAACTCTGTGACTGTGTAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                                                                                        <  1:623017/141‑1 (MQ=255)
                                            aTTGACCATAATGCCAGAGAAAATGTTATTTTTTCTGGCGGAAAATACCTTAATAATAAACTCTGTGACAGTGTAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGAt                                                                                        <  2:239176/141‑1 (MQ=255)
                                              tGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGGGTATAATTCCTTAATAATAAACTCTGTGACAGTGTATTTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAg                                                                                      <  1:2440238/141‑1 (MQ=255)
                                              tGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAg                                                                                      >  2:2354525/1‑141 (MQ=255)
                                              tGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAg                                                                                      >  2:2355597/1‑141 (MQ=255)
                                              tGACAATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAg                                                                                      <  1:2126596/141‑1 (MQ=255)
                                                acaaTAATGCCATAGCAAATGTTCTTTTTTCGGGCGGATAATTCCTTAATAATAAACTATGTGACTGTGTAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGc                                                                                    <  2:1004684/138‑1 (MQ=255)
                                                acaaTAATGCCATAGAAATTGTTTTTTTTTCTGGCGTAAAATTCATTAATAATAACCTCTTTGACAGTGGAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGc                                                                                    <  2:1004633/138‑1 (MQ=255)
                                                aCCATAATGCCAGAGAAAATGTAATTTTTTCTGGCGTATAATTCATTAAAAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGc                                                                                    <  2:1004864/141‑1 (MQ=255)
                                                 ccATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCt                                                                                   >  1:1543501/1‑141 (MQ=255)
                                                 ccATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCt                                                                                   >  1:1543551/1‑141 (MQ=255)
                                                   atatTGCCAGAGAAATTTTTATTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACTGTGTAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac                                                                                 <  1:997234/141‑1 (MQ=255)
                                                   aTAATGCCATAGAAGATGTTATTTTTTCTGGCGTATAATAACTTAATAAAAAACTCTGTGACATTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac                                                                                 <  2:149976/141‑1 (MQ=255)
                                                   aTAATGCCATAGAAAATGTTCTTTTTTCTGGCGTATAATTCATTAATAATAAACTCTGTTACAGTGTAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac                                                                                 <  2:150038/141‑1 (MQ=255)
                                                   aTAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac                                                                                 >  1:2152138/1‑141 (MQ=255)
                                                   aTAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTac                                                                                 >  2:2286182/1‑141 (MQ=255)
                                                     aaTGCCATAGCAAATTTTATTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGTATTTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTacac                                                                               <  2:1635097/141‑1 (MQ=255)
                                                     aaTGCCATAGAAAATGTTATTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGGGGATTTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTacac                                                                               <  2:1691243/141‑1 (MQ=255)
                                                     aaTGCAAGAGCAAATTTTCTTTTTTCTGGCGTATAATACCTTAATAATAAACTCTGTGACAGTGTAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTacac                                                                               <  2:1691189/141‑1 (MQ=255)
                                                     aaTGCAAGAGAAAATGTTCTTTTTTCTGGCGTATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTacac                                                                               <  2:1691198/141‑1 (MQ=255)
                                                       tgacAGAGAAATTGTTATTTTTTTTGGTGTATATTTCATTAATAATAAACTCTGTGACTGTGGAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAt                                                                             <  1:1461174/138‑1 (MQ=255)
                                                       tGCCAGAGCATATGTTATTTTTTCGGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGATTTATCGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAt                                                                             <  2:2399477/141‑1 (MQ=255)
                                                       tGCCAGAGCAAATGTTATTTTTTCGGGGGTATATTTCCTTAATAATAAACTCTTTGACCGTGTAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACAt                                                                             <  1:1461162/141‑1 (MQ=255)
                                                         ccAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTa                                                                           >  1:1166917/1‑141 (MQ=255)
                                                          cAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTATCCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTaa                                                                          >  1:568553/1‑141 (MQ=255)
                                                           agagCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAt                                                                         >  2:672826/1‑141 (MQ=255)
                                                           agagCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAAt                                                                         >  2:672904/1‑141 (MQ=255)
                                                                aaaTGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGa                                                                    <  2:1066161/141‑1 (MQ=255)
                                                                 aaTGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGAc                                                                   >  1:1957598/1‑141 (MQ=255)
                                                                      tCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGa                                                              >  2:229348/1‑141 (MQ=255)
                                                                             tCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaaaa                                                       >  1:2229165/1‑141 (MQ=255)
                                                                                            cTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCTATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTaaa                                        >  2:1613632/1‑141 (MQ=255)
                                                                                               aataataaACTCTGTGACTGTGTATTTAAGGGCCCCGCAATTACCCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAaat                                     <  1:590299/141‑1 (MQ=255)
                                                                                               aataataaACTCTGGTACAGTGGAATTAAGGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAaat                                     <  2:354191/141‑1 (MQ=255)
                                                                                                ataataaACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAaata                                    >  1:1995377/1‑141 (MQ=255)
                                                                                                   ataaACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATc                                 >  1:1957830/1‑141 (MQ=255)
                                                                                                     aaaCTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAATTAATCtt                               >  1:322397/1‑141 (MQ=255)
                                                                                                     aaaCTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCtt                               >  2:714354/1‑141 (MQ=255)
                                                                                                      aaCTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTa                              >  2:574700/1‑141 (MQ=255)
                                                                                                        ctctGTTACAGTGGAATTAACGGCCCCGCCATTAACCCCTCAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  2:126663/141‑1 (MQ=255)
                                                                                                        ctctGTGACCGTGTAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  1:1183140/141‑1 (MQ=255)
                                                                                                        ctctGTGACAGTGTAATTAACGGCCCCGCCATTAACCCCTTAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  1:1641462/141‑1 (MQ=255)
                                                                                                        ctctGTGACAGTGTAATTAACGGCCCCGCCATTAACCCCTCAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  1:1070342/141‑1 (MQ=255)
                                                                                                        ctctGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  2:126704/141‑1 (MQ=255)
                                                                                                        atctTTGACTGTGTATTTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAAt                            <  1:1185081/140‑1 (MQ=255)
                                                                                                          ctGTGACTGTGGTTTTAACGGCCCCTCAATTAACCCATGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACCGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                          <  1:1022658/141‑1 (MQ=255)
                                                                                                          ctGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                          >  1:20561/1‑141 (MQ=255)
                                                                                                          ctGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                          >  1:234298/1‑141 (MQ=255)
                                                                                                          ctGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                          >  1:272179/1‑141 (MQ=255)
                                                                                                          ctGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTc                          >  1:1612343/1‑141 (MQ=255)
                                                                                                             tgcctgtgtAATTAACGGCCCCGCAATAAACCCCTGCACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGcc                       <  2:1391116/136‑1 (MQ=255)
                                                                                                             tgACAGTGGAATTAACGGCCCCGCAATTAACCCCAGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGcc                       <  2:1391133/141‑1 (MQ=255)
                                                                                                               aCAGTGTAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTa                     <  2:757186/141‑1 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  2:121497/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  2:2095934/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  1:164053/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  2:2095885/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  1:2422094/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  1:2421980/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTc                  >  2:1647828/1‑141 (MQ=255)
                                                                                                                  gTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGAATGAAAGTAAAAATAATCTTAATTCGACTATTc                  >  1:2421509/1‑141 (MQ=255)
                                                                                                                    gtaaTTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCtt                <  1:1094740/139‑1 (MQ=255)
                                                                                                                    ggAATTAACGGCCCCGCCATTACCCCCTCAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCtt                <  1:199656/141‑1 (MQ=255)
                                                                                                                    ggAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCtt                <  1:1406542/141‑1 (MQ=255)
                                                                                                                    ggAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCtt                <  1:1239935/141‑1 (MQ=255)
                                                                                                                    ggAATTAACGGCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATCCGCCTATTCtt                <  1:2328029/141‑1 (MQ=255)
                                                                                                                            cGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCaa        >  2:1611620/1‑141 (MQ=255)
                                                                                                                              gCCCCGCCATTAACCCCTTAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAAcc      <  1:597171/141‑1 (MQ=255)
                                                                                                                              gCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAAcc      <  1:171719/141‑1 (MQ=255)
                                                                                                                              gCCCCGCCATTAACCCCTCAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAAcc      <  1:597141/141‑1 (MQ=255)
                                                                                                                              gCCCCGCAATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAAcc      <  1:125421/141‑1 (MQ=255)
                                                                                                                                  cGCCATTAACCCCTTAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGcc  <  2:1605822/141‑1 (MQ=255)
                                                                                                                                  cGCCATTAACCCCGTCACGACTCTAAAAAATATCCGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGcc  <  2:1609365/141‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                         
AACCGCCCAATATCGGCCCACATATCGGAGCGATAATCACGGTCATTGACCATAATGCCAGAGCAAATGTTCTTTTTTCTGGCGGATAATTCCTTAATAATAAACTCTGTGACAGTGGAATTAACGGCCCCGCCATTAACCCCTGAACGACTCTAAAAAATATCAGCACATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAAAAGTGACTGAAAGTAAAAATAATCTTAATTCGCCTATTCTTTGTGCCAACCTGCC  >  NC_000913/2481687‑2481957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑