| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4175464 | 119 (1.070) | 10 (0.150) +TCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGA |
5/170 | 2.9 | 12.1% | intergenic (+1/‑8) | thrU/tyrU | tRNA‑Thr/tRNA‑Tyr |
| ? | NC_000913 | 4175475 = | 121 (1.090) | noncoding (4/85 nt) | tyrU | tRNA‑Tyr | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4175390‑4175464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATAAGTTCGCTTACCGGCTCG > NC_000913/4175475‑4175609 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| CGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGA > 1:1569584/1‑141 GTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGCGGCCAAAGGG > 1:1456935/1‑141 GTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGCGGCCAAAGGG > 1:1457015/1‑141 TAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAG < 1:1127084/141‑1 TAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAG < 1:1127086/141‑1 TGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAAT > 1:1108202/1‑141 CAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCAtc > 1:657640/1‑139 ACCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAt < 2:1946656/141‑2 CCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAtg < 2:1906223/141‑3 CCAGTTCGATTCCGGTAGTCGGCACCATTCTCTCCTGTTTCATAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGAtg < 2:1906222/141‑3 CTGTTTCTTAAAGAAACAACGAGTAGTGAGAATGGCTAGAAATTTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGATGGTTCGAATCCGTCCCCCACCACCAATTTCGGCCA > 1:1245736/1‑141 acacccTGGAGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATAAGTTCGCTTACCGG > 1:5587/7‑141 TTTGGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCACTGCCTTCGATGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATAAGTTCGCTTACCGGCTCG > 1:596213/1‑141 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| CGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4175390‑4175464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAAGGTTCGAATCCTTCCCCCACCACCAATTTCGGCCACGCGATGGCGTAGCCCGAGACGATAAGTTCGCTTACCGGCTCG > NC_000913/4175475‑4175609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |