New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2731059	413 (3.460)	34 (0.380) +ACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC	13/210	1.8	9.9%	noncoding (99/1542 nt)	rrsG	16S ribosomal RNA
	?	NC_000913	= 4035603	NA (NA)					noncoding (73/1542 nt)	rrsA	16S ribosomal RNA
Rejected: Frequency below/above cutoff threshold.

TGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2730935‑2731059 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGAC‑GCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCT  <  NC_000913/4035603‑4035478                                                                                                                               |||||||||||||||||||||||||||||||||||                                                                                                                                TGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCC                                                                                                                                                    >  2:1580505/1‑141        AGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGCTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGG                                                                                                                                             <  1:1377175/141‑1        AGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGCTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGG                                                                                                                                             <  1:1634714/141‑1         GGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGT                                                                                                                                            <  1:318995/141‑1                    CCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC                                                                                                                                 >  2:560163/1‑141                    CCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC                                                                                                                                 >  2:1003712/1‑141                           TTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCG                                                                                                                          >  2:1209075/1‑141                                                   ATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCT                                                                                                   >  2:1212190/1‑141                                                   ATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCT                                                                                                   >  2:1212141/1‑141                                                   ATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTG                                                                                                  >  2:1826182/1‑141                                                     TAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGCTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCC                                                                                                <  1:1047978/141‑1                                                         TACCGTTTCCAGTAGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCA                                                                                            <  1:815910/141‑1                                                         TACCGTTTCCAGTAGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCA                                                                                            <  1:393494/141‑1                                                           tCGTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGC                                                                                          >  1:972166/2‑141                                                           tCGTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGC                                                                                          >  1:460909/2‑141                                                           CCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGC                                                                                          >  2:895553/1‑141                                                              TTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTT                                                                                       <  1:1054473/141‑1                                                              TTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTT                                                                                       <  1:1054540/141‑1                                                              TTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTT                                                                                       <  1:544971/141‑1                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      >  1:1995474/1‑141                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      >  1:363233/1‑141                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      >  1:1344879/1‑141                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      >  1:498340/1‑141                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      >  1:1591694/1‑141                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      <  1:798684/141‑1                                                               TTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC                                                                                      <  1:677864/141‑1                                                                 ccaatgGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAA                                                                                    >  1:1507735/7‑141                                                                   AGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATC                                                                                  <  1:72256/141‑1                                                                         TATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCC                                                                            <  1:1612239/141‑1                                                                                      CA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCT                                                               <  1:895553/141‑1                                                                                         ggcaatTTCCTAGGCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTC                                                             <  1:231706/135‑1                                                                                                  ctaggCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTTCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAga                                                    <  1:1782602/136‑3                                                                                                  ctaggCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAga                                                    >  1:655906/6‑139                                                                                                   taggCATTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAgcg                                                   >  1:1328291/5‑138                                                                                                         TTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGtt                                             >  1:56067/1‑139                                                                                                         TTACTCACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGtc                                             <  1:1786537/141‑3                                                                                                              CACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGttcggct                                        <  1:1123471/141‑8                                                                                                              CACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGttcggct                                        <  1:1832522/141‑8                                                                                                              CACCCGTCCGCCGCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGttcggct                                        <  1:305045/141‑8                                                                                                                         cgCTCGACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAGATTTTGTCGGCTCAATGAATactg                             <  1:1534245/139‑5                                                                                                                                                   AGGTTCAGTTAACTCGTTTCCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGAC‑GCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCT  >  1:676487/1‑141                                                                                                                               |||||||||||||||||||||||||||||||||||                                                                                                                                TGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGCTTCCCAGACATTACTCACCCGTCCGCCACTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2730935‑2731059 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGAC‑GCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCT  <  NC_000913/4035603‑4035478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.