Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,965,147	0	C	A	29.8%	126.0 / 18.3	67	Q3H (CAG→CAT)	thyA	thymidylate synthase
Reads supporting (aligned to +/- strand):  ref base C (13/34);  new base A (20/0);  total (33/34)
Fisher's exact test for biased strand distribution p-value = 9.89e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CAACGTTTAGTTGTCACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTG  >  NC_000913/2965007‑2965287                                                                                                                                             |                                                                                                                                             cAACGTTTAGTTGTCACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATAc                                                                                                                                              <  2:1736345/141‑1 (MQ=255)             gTCACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTATGTGTTCCGTCGGCGAGCACATTTTTCATAAGGTGTAAAAACTGTTTAATTGtt                                                                                                                                  >  1:1690582/1‑141 (MQ=255)              tCACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCGTTGTGGCTTAGTCGAGCACTTTTTTCATAAGTTCAAAATAATTTTTAAAGGtta                                                                                                                                 >  1:1032679/1‑140 (MQ=255)               cACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTATTTGTGCCATCGTCGAGCACATTTTTCATAAGTTCTAAAAAAAGTTTCAAGGTTcc                                                                                                                                >  1:1272039/1‑141 (MQ=255)                     cgcgAATCCATCTTGCAGGTTACACCGCATCAGATGACCAAAAATCGAACGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTGGCATCAGTTCTAACTACTGTTTCATGGGTCCTCAGGa                                                                                                                          <  2:305262/138‑1 (MQ=255)                     cGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGa                                                                                                                          <  2:1799444/141‑1 (MQ=255)                     cGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGa                                                                                                                          <  1:695567/141‑1 (MQ=255)                     cGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGa                                                                                                                          <  1:2079510/141‑1 (MQ=255)                       ggAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTGTGTGTGCCTTCGTCGAGCACTTTTTTCATCAGTTCTAAATACTGTTTAATTGTTCCTCAGGaaa                                                                                                                        >  2:807905/1‑141 (MQ=255)                       ggAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGaaa                                                                                                                        <  1:1912631/141‑1 (MQ=255)                         aaTCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGGCTTCGTCGAGCACATTTTTGATCAGTTGTTAATAATGTTTAATGTTTGCTCAGGAAACg                                                                                                                      >  1:762333/1‑141 (MQ=255)                          aTCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACgt                                                                                                                     <  2:343943/141‑1 (MQ=255)                          aTCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACgt                                                                                                                     <  2:657239/141‑1 (MQ=255)                          aTCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACgt                                                                                                                     <  2:655053/141‑1 (MQ=255)                           tCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGGGTGCCTTAGTCGAGCACTTTTTGCATCAGTTGTAAATAATGTTTCATGGTTCCTCAGGcaaactg                                                                                                                    >  2:2096119/1‑137 (MQ=255)                           tCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGCCGTCGTGGTGCCCTTTTTTGATCAGTTGTAAAAAATTTTTGATTGGTGCTAAGGAAAAgtg                                                                                                                    >  1:745451/1‑141 (MQ=255)                           tCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTCTGTGTGCCTTCGTCGAGCACTGTTTGCATCAGTTCTAAATACTGTTTGATGGTTACTCAGGAAACgtg                                                                                                                    >  2:1647518/1‑141 (MQ=255)                           tCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTCTGTGTGCCTTCGGCGAGCACTTTTTTCATCAGTTCTAAATAATGTTTCATTGTTCCTCAGGAAACgtg                                                                                                                    >  2:1491157/1‑141 (MQ=255)                           tCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTCTGTGTGCCATCGTCGAGCACTTTTTGCATCAGTTCTAAAAAATGTTTCATTGTTACTCAGGAAACgtg                                                                                                                    >  2:1682846/1‑141 (MQ=255)                             cATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGCCATCGTCGAGCACATTTTTGAAAACTTATAAATAAATTTTAATTGTTACTCAGGAAACCTGtt                                                                                                                  >  1:1269821/1‑141 (MQ=255)                              aTCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGGCTTCGTCGGGCACTTTTTGGTTGAGTTGTAAATACTGTTTGATGGTTACTCAGGGAAAGTGTTg                                                                                                                 >  1:911388/1‑141 (MQ=255)                              aTCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGGGGCTTCGTCGAGCACATTTTTCATAAGTTGTTAATAATTTTTGATGGTTGGGCAGGaaaaggggtt                                                                                                                 >  1:1637542/1‑134 (MQ=255)                              aTCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTATGTGTGCCTTCGTCGAGCACTTTTTTCATCAGTTCTAAATAATGTTTCATGGTTCCTCAGGAAACGTGTTg                                                                                                                 >  2:1900883/1‑141 (MQ=255)                              aTCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGGTTGTGTGTGGCGTCGTCGAGCACATTTTTGATAAGTTATAAATAAATTTTGAATGTTGCTCAGGGAACGTGttt                                                                                                                 >  1:1862686/1‑140 (MQ=255)                               tCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGGCGTCGTGGAGGACTTTTTTGATCAGGTCGAAATAATGTTTGATGGTTACTACGGGAACGAGtttg                                                                                                                >  1:1819300/1‑139 (MQ=255)                               tCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTATGTGTTCCGTCGGCGAGCACTTTTTGCAAGAGTTCGAAATAAAGTTTCATGGTTCCGCCGGGAACGTGtttc                                                                                                                >  2:1913794/1‑139 (MQ=255)                                      ggTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGc                                                                                                         <  2:1744940/141‑1 (MQ=255)                                         tAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTGTGCCTTCGTCGTGCACATTTTTGATCAGTTCTAAATACAGTTTAATGGGTACTCAGGAAACGTGTTGCTGTGGGCTGc                                                                                                      >  2:562238/1‑141 (MQ=255)                                               gCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTTTGCCATCCTCGAGCACTTTTTTCATCAGTTCTAAAAACTGTTTAATGGTTACTCAGGAAACGTGTTGCTGTGGGCTGCGACGat                                                                                                >  2:180346/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTTTGGGTGCCTTAGTCGAGCAATTTTTGCCTCAGTTCTAAATAATGTTTCCTTGTTGCTCAAGAAACGTGTTGCTTTGGGCGGCGACGata                                                                                               >  2:613710/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTGTGTGTGGCTTCGTGGGGCACATTTTTGATAAGGTGTAAATAAATTTTTATTGTTTCAGAGGTAACGTGTTTCTTTGGGCTGCGTCGata                                                                                               >  1:728789/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTGTGTGTGGCTTCGGCGAGCCCATTTTTGATCAGGTGGAAATAAATTTTGATGGTTCCTCAGGAAACGGGTTGCTGTGGGGTGCGACGata                                                                                               >  1:728794/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGata                                                                                               <  1:806910/141‑1 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGGTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGata                                                                                               <  1:806801/141‑1 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCATCGTCGAGCACATTTTGCATCAGTTATAAATAAAGTTTAATGGTTACACAGGAAACGTGTTGCTGTGGGCTGcgacgaaa                                                                                               >  2:613676/1‑139 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTATGTGTGCCGTCGTCGAGCACTTTTTTCAACAGTTCTAAATAATGTTTCATTGTTACGCATGTAACGTGTTGGTGTGGGGGGGGACGata                                                                                               >  2:1723589/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTGTGTTTGGCGTCGTCGAGCACGTTTTTGATAAGTTATAAATAATGTTTGATGGTTGATCAGGAAACGTGTTGGTGTGGGGTGCGGCGata                                                                                               >  1:1879207/1‑141 (MQ=255)                                                cATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTGTTTATGTGTTCCTTCGTAGAGCACTTTTTGAATAAGTTGGAAATACAGTTTCAAGGTTGCTCAGGAAACGTGTTGCTGTGGGCTGCGACGata                                                                                               >  2:1841633/1‑141 (MQ=255)                                                         aCCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGGTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGAc                                                                                      <  1:517361/141‑1 (MQ=255)                                                              aaaTGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACcatca                                                                                 <  1:1821733/141‑1 (MQ=255)                                                                              ggttccggtACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGAc                                                                 <  2:1426127/141‑1 (MQ=255)                                                                                                tttCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAg                                               <  2:845027/141‑1 (MQ=255)                                                                                                   cTGTGTGCCTTCGTCCAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTAAGGAAAAGTGTTGCTGTGGGCTGCGAAGATATGCCCAGACCAACAATATAACACCCGCGACAAACAACGGGATGGAAAGaaa                                            >  2:2062816/1‑140 (MQ=255)                                                                                                   atgtgtgCCATCGTCGAGCACATTTTTCATCAGTTCTAAATAATGTTTAAAGGGTCCTCAGGAAACGTGGTGCTGTGGGCTGCGACGATATGCCCACACCAACAATATCAAACCCGCGACAATCATAGGGATGGAAAGAAt                                            >  2:875576/2‑141 (MQ=255)                                                                                                      tgtgCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTg                                         >  1:414406/1‑141 (MQ=255)                                                                                                         gCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGccc                                      <  1:150885/141‑1 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   <  2:258246/141‑1 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   <  2:296368/141‑1 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   <  2:296369/141‑1 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   >  1:1073810/1‑141 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   <  2:1598046/141‑1 (MQ=255)                                                                                                            ttCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAt                                   <  1:1864245/141‑1 (MQ=255)                                                                                                              cgtcgAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGc                                 <  2:1943246/141‑1 (MQ=255)                                                                                                              cgtcgAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGc                                 <  2:1943335/141‑1 (MQ=255)                                                                                                              cgtcgAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGc                                 <  2:241284/141‑1 (MQ=255)                                                                                                                 cgAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGa                              <  1:1918430/141‑1 (MQ=255)                                                                                                                   aGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATg                            <  2:1552479/141‑1 (MQ=255)                                                                                                                   aGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATg                            <  2:1702638/141‑1 (MQ=255)                                                                                                                   aGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATg                            <  2:491851/141‑1 (MQ=255)                                                                                                                         ttttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGc                      <  1:2105281/141‑1 (MQ=255)                                                                                                                         ttttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGc                      <  1:2105289/141‑1 (MQ=255)                                                                                                                            tGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAcc                   <  2:1307791/141‑1 (MQ=255)                                                                                                                                tCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAgg               >  1:1775014/1‑141 (MQ=255)                                                                                                                                 cAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGc              <  1:1682846/141‑1 (MQ=255)                                                                                                                                 cAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGc              <  1:974604/141‑1 (MQ=255)                                                                                                                                 cAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGc              >  1:2146068/1‑141 (MQ=255)                                                                                                                                   gTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCAc            <  2:242587/141‑1 (MQ=255)                                                                                                                                        aaaTACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTa       >  1:451629/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  1:288349/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  1:1941312/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  1:624384/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  1:7539/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  1:985263/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTg  >  2:1542994/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGATAAACTg  >  1:312150/1‑141 (MQ=255)                                                                                                                                             cTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGATAAACTg  >  1:1545569/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                             CAACGTTTAGTTGTCACCAGCGGGAATCCATCTTGCAGGTTAAAACGCATCTGATGACCAAAAATGGAAAGCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTG  >  NC_000913/2965007‑2965287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑