Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,967,999 | 0 | A | . | 68.7% | 168.2 / 186.1 | 115 | coding (84/1104 nt) | rfe | UDP‑N‑acetylglucosamine‑‑undecaprenyl‑phosphate N‑acetylglucosaminephosphotransferase |
Reads supporting (aligned to +/- strand): ref base A (32/4); new base . (58/21); total (90/25) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.72e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 119 total aligned reads displayed.
GAATAAAGGTCTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCATCT > NC_000913/3967859‑3968137 | gAATAAAGGTCTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCa < 2:1760030/141‑1 (MQ=255) aTAAAGGTCTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCaaa < 1:1625740/141‑1 (MQ=255) aTAAAGGTCTTCGTGGTTATACTTCTGCTAATAAGTTTCACTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCaaa < 1:436589/141‑1 (MQ=255) tCTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCaaaaaagtcg > 1:135998/1‑137 (MQ=255) cTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCgg > 1:301347/1‑141 (MQ=255) cTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCgg > 1:1069011/1‑141 (MQ=255) cTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCgg > 1:1897578/1‑141 (MQ=255) gTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTg > 1:1047893/1‑141 (MQ=255) gTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTg > 1:1047435/1‑141 (MQ=255) tCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAAcc > 1:456548/1‑141 (MQ=255) cTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCa > 1:124551/1‑141 (MQ=255) cTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCa > 1:1066799/1‑141 (MQ=255) cTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCa > 1:881665/1‑141 (MQ=255) aataatTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACt > 1:114107/1‑141 (MQ=255) atTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGc < 2:1003035/141‑1 (MQ=255) ctGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTc > 1:1466542/1‑141 (MQ=255) tGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCa > 2:687391/1‑141 (MQ=255) agCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAg < 1:8988/141‑1 (MQ=255) agCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAg < 1:1526287/141‑1 (MQ=255) atgcatTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGa > 2:1479404/1‑141 (MQ=255) tgtgAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATa > 1:1937799/1‑141 (MQ=255) tgtgAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATa > 1:747711/1‑141 (MQ=255) aTTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACctct < 1:1974647/141‑1 (MQ=255) tGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAATAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTgg > 1:447330/1‑141 (MQ=255) tGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTgg > 1:455811/1‑141 (MQ=255) tGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTgg > 1:447422/1‑141 (MQ=255) cAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTgggg < 1:1372402/141‑1 (MQ=255) cAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTgggg < 1:1371967/141‑1 (MQ=255) tGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGtt < 2:556065/141‑1 (MQ=255) tGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGtt > 1:834456/1‑141 (MQ=255) aTCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTTCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTa > 2:1775468/1‑141 (MQ=255) catcaGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCa > 1:1833355/1‑141 (MQ=255) catcaGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCa > 1:653917/1‑141 (MQ=255) tcaGTATTTTTTTAGTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAgg < 2:2072652/141‑1 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:781481/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:594710/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:470298/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:605545/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:73500/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:781493/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1884051/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1795386/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1674554/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1550258/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1303387/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGa > 1:1118013/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAATGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:428051/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:1424751/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:2013560/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:2144208/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:2144234/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:427972/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:447762/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 2:792545/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:12286/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:1928821/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:1773191/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:1587857/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:456684/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:1587856/1‑141 (MQ=255) gTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAt > 1:687248/1‑141 (MQ=255) aTTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGAttt > 1:370998/1‑141 (MQ=255) tttttATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGc > 2:1514309/1‑141 (MQ=255) tttttATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCt > 2:1902167/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCACAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCAc > 1:1315442/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCAc > 1:1861846/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCAc > 1:881335/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 2:611432/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 1:460387/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 1:460375/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 2:1206157/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 2:1358866/1‑141 (MQ=255) aTTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCACTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACg > 2:1946897/1‑141 (MQ=255) cACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTc < 1:1477275/141‑1 (MQ=255) cACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTc < 1:1477250/141‑1 (MQ=255) cacTGTTTCTGTTTTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCGCCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAAt < 2:1848408/141‑1 (MQ=255) acTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAAt < 2:779866/141‑1 (MQ=255) tgtttctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGt < 2:1875742/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 2:1897578/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 2:301347/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 2:1498864/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 1:713108/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 1:2164970/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt > 2:1413183/1‑141 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 2:1220708/141‑1 (MQ=255) tctgtttTTTGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt > 2:1253551/1‑141 (MQ=255) atgtttttttGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGAt < 1:716257/137‑1 (MQ=255) tttGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACtat > 1:644667/1‑141 (MQ=255) tttGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACtata > 2:1294342/1‑141 (MQ=255) tttGCCCGTAAGGTGGC‑AAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACtata > 2:324959/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGACTTGTCGATTACTATATTCCgcatgcat > 1:689214/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCgcatgcat > 1:1813013/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCgcatgcat > 1:1861281/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCgcatgcat > 1:1628242/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCgcatgcat > 1:932874/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCgcatgcat > 1:506304/1‑141 (MQ=255) tGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATGGTCGATTACTATATTCCgcatgcat > 1:809500/1‑141 (MQ=255) ggCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCAtc > 1:795416/1‑141 (MQ=255) ggCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCAtc > 1:749356/1‑141 (MQ=255) gCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCAtct > 1:2160008/1‑141 (MQ=255) | GAATAAAGGTCTTCGTGGTTATACTTCTGCTAATAATTTTCTCTGAGAGCATGCATTGTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCATCT > NC_000913/3967859‑3968137 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |