BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,086,955	0	C	A	31.1%	149.8 / 14.3	121	intergenic (+106/‑47)	fdhD/yiiG	sulfurtransferase for molybdenum cofactor sulfuration/DUF3829 domain‑containing lipoprotein YiiG
Reads supporting (aligned to +/- strand): ref base C (32/39); new base A (32/0); total (82/39)
Fisher's exact test for biased strand distribution p-value = 5.59e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 122 total aligned reads displayed.

CGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAA  >  NC_000913/4086815‑4087092

cGGTTTATACCCATCCCCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTc                                                                                                                                            >  1:1546401/1‑141 (MQ=255)

    ttATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCAttt                                                                                                                                        >  1:932583/1‑141 (MQ=255)

    ttATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGAttt                                                                                                                                        >  1:1946686/1‑141 (MQ=255)

     tataCCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTATTTTTTAATtta                                                                                                                                       >  1:1657730/1‑141 (MQ=255)

       taCCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATttatt                                                                                                                                     <  2:55107/141‑1 (MQ=255)

         cccATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTtattat                                                                                                                                   <  2:1393480/141‑1 (MQ=255)

         cccATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTtattat                                                                                                                                   <  2:1984038/141‑1 (MQ=255)

          ccATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCAATTTTTATg                                                                                                                                  >  1:2092259/1‑141 (MQ=255)

           cATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCAGTTATTATGt                                                                                                                                 >  1:1547794/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTATATTGCAGGACTTATTCATTTCGTGAATGGTATTATTTTATTTATAAACAAAATGCGTGTCGTGGCGTGTTCTTTTTTCATGTTTTTTGtt                                                                                                                                >  2:1673350/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTGTTTTTTCATTTTTTTTGtt                                                                                                                                >  1:658775/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTGTTTTTTTTTGtt                                                                                                                                >  1:1686986/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGtt                                                                                                                                >  1:244049/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGtt                                                                                                                                >  1:1825241/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATggt                                                                                                                                >  1:879001/1‑139 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATGtt                                                                                                                                >  1:1191790/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATGtt                                                                                                                                >  1:2030478/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATGtt                                                                                                                                >  1:666709/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATGtt                                                                                                                                >  1:737733/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTAtttt                                                                                                                                >  1:735376/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATGtt                                                                                                                                >  1:2116893/1‑141 (MQ=255)

            aTCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTCTTTTTTAATTTTTTTTGtt                                                                                                                                >  1:1209271/1‑141 (MQ=255)

            aTCCGCAGCGTGTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTTTGtt                                                                                                                                >  1:2136328/1‑141 (MQ=255)

             tCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTc                                                                                                                               <  1:1905932/141‑1 (MQ=255)

                gCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCAct                                                                                                                            <  1:1385555/141‑1 (MQ=255)

                gCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTCTTTTTTGATTTATTTTGTTAAct                                                                                                                            >  1:676118/1‑141 (MQ=255)

                   gCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATGTTCActctc                                                                                                                         >  1:1390231/1‑141 (MQ=255)

                    cGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATTAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCActctct                                                                                                                        <  2:1668627/141‑1 (MQ=255)

                      tttGAGCAATTAATTAAAATAAGTCCTGCGATATATATTAAATAGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTa                                                                                                                      <  2:708551/141‑1 (MQ=255)

                             gattaattaAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTAACTCTCTTATCtatat                                                                                                               >  1:1033654/2‑141 (MQ=255)

                             aattaattAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTTTGTTAACAATATTATCtatat                                                                                                               >  1:1797202/1‑141 (MQ=255)

                                        aTAAGTCCTGAGAAATATATTAAATTTCAGGACTTATTCATTTAGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGc                                                                                                   <  1:1122039/141‑1 (MQ=255)

                                           aGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAAGTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAAt                                                                                                >  2:1459756/1‑141 (MQ=255)

                                            gTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATTTATTTATAA‑GGCAAtt                                                                                               >  2:720092/1‑141 (MQ=255)

                                                tGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAAt                                                                                           <  2:307773/141‑1 (MQ=255)

                                                 gCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATGTTCACTCTCTTTTAGATATATTTATAA‑GGCAATTAAATg                                                                                          >  1:1989745/1‑141 (MQ=255)

                                                  cGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGa                                                                                         <  1:328697/141‑1 (MQ=255)

                                                      atatatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAg                                                                                     <  2:1068708/141‑1 (MQ=255)

                                                       tatatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAgg                                                                                    <  2:1383371/141‑1 (MQ=255)

                                                         tatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATTAAAAGGaa                                                                                  >  1:522540/1‑141 (MQ=255)

                                                         tatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGaa                                                                                  <  2:238747/141‑1 (MQ=255)

                                                         tatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGaa                                                                                  <  2:238743/141‑1 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAAtt                                                                                >  2:1511342/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAAtt                                                                                >  2:1511310/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAAtt                                                                                <  2:1195283/141‑1 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAAtt                                                                                <  2:1195247/141‑1 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTTTTTTGTTAACTCTCTTATCTATATATTTTTAA‑GGCCATTAAATGAAAAGGAAtt                                                                                >  1:1308456/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTTTGTTGACTCTCTTATCTATATATTTATAA‑TGCAATTAAATGAAAAGGAAtt                                                                                >  1:2139320/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGTTTTATTATTTTAGATCTATTATCTAAAAATTTATAA‑TTCAAAAATATGAAAAGGaaat                                                                                >  1:1627349/1‑139 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTATTATGTTGACTATATTTTGTATATATTTATAA‑GGCAATTAAATTAAAAGGAAtt                                                                                >  1:1640990/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTCATTTATTTTGTTAACACAATTATGTATATATTTATAA‑TGCAAATAAAATAAAAGGAAtt                                                                                >  1:723924/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATTTTGACTCTCTTATATATATATTTATAA‑GGCAATTAAATGAAAAGGAAtt                                                                                >  1:1627418/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTAATTTTTAATTTTTTATTTTAACAATATTATCTATATATTTATAA‑GTCAATTTAATTTAAATGAAtt                                                                                >  1:2139329/1‑141 (MQ=255)

                                                           ttAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTATTTTTTGATTTATTATGTTAACTATCGTATCTATAAATTTTTAA‑GGCAATTAAATTTAAATGAAtt                                                                                >  1:1813037/1‑141 (MQ=255)

                                                            tAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATGTTAACTATCTTATCTATATATTTATAA‑TGCAATTAAATGAAAATGAAttt                                                                               >  2:738761/1‑141 (MQ=255)

                                                             aaaTTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCAGTTATTATGTTAACTCTCGTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATtta                                                                              >  1:1095621/1‑141 (MQ=255)

                                                              aaTTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATttat                                                                             <  2:283121/141‑1 (MQ=255)

                                                                    aGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCtt                                                                       <  2:2017656/141‑1 (MQ=255)

                                                                      gACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTcc                                                                     <  1:1713186/141‑1 (MQ=255)

                                                                      gACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTcc                                                                     <  1:1221343/141‑1 (MQ=255)

                                                                      gACTTAATCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTcc                                                                     <  1:1006126/141‑1 (MQ=255)

                                                                          tATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTTTTTTGTTCACTCTCTGATCTATATATTTATTA‑GGCAATTAAATGTAAAGGAATTTATTATCTTCCGCta                                                                 >  2:2129920/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGTATTTATTATCTTCCGCGATtata                                                            >  2:1976034/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATtata                                                            >  1:2121349/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTTTTATGTTAACTCTCTTATATATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATATTCCGCTATtata                                                            >  1:881444/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTCATTTATTATGTTCACTCTCTTATCTAAATATTTATAA‑GGCAAATAAATGTAAATGAATTTATTATCTTCCGCTATtata                                                            >  1:1591232/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATGTTCACTCTCTTATATATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATATTACGCTATtata                                                            >  1:1613592/1‑141 (MQ=255)

                                                                               aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTATTTTTTGATTTATTTTGTTGAATATCGTTTGTATTAATTTTTAA‑TGGAATTAAATGTAAAGGAATTTATTTTATTACGCTATtata                                                            >  1:266696/1‑141 (MQ=255)

                                                                                tttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATTTTAACTCTATTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATATTCCGCGAGTATAg                                                           >  1:2039563/1‑141 (MQ=255)

                                                                                tttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTTTTATGTTAACTCTCTTATCTATATATTTTTAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTGTTATAg                                                           >  1:671528/1‑141 (MQ=255)

                                                                                tttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTATTATGTTAACTCTGTTATCTATATATTTATAA‑GGCAATTAAATTAAAAGGAATTTATTATATTACGGTATTTTAg                                                           >  1:1738608/1‑141 (MQ=255)

                                                                                tttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATGTTCACTCACTTATCTATATATTTATAA‑GGCAATTAAATGAAAATGAATTTATTATATTCCGCTATTATAg                                                           >  1:2017874/1‑141 (MQ=255)

                                                                                 ttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGt                                                          <  1:1485831/141‑1 (MQ=255)

                                                                                 ttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTTTTTTGTTGACTCACTTTTCTATATATTTATAATGGCAATAAAAT‑AAAAAGAAATTATTTAATTACGCGATTATAGt                                                          >  1:552499/1‑141 (MQ=255)

                                                                                 ttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTAATTTATTATTTTGAATCTCTTATATATATATTTATAA‑TGCAAATAAATTAAAAAGAATTTATTATATTACGCGATtatatt                                                          >  1:622047/1‑139 (MQ=255)

                                                                                 ttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTGTTTTTTGATTTTTTATGTTGACTCTCTTATGTATATATTTATTA‑TGGAATTAAATGTAAATGTATTTATTATATTGCGCGATTTTAGt                                                          >  1:552482/1‑141 (MQ=255)

                                                                                 ttCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTCTTTTTTGATTTATTATGTTGAATCAATTTTATATATATTTATAA‑TGCCAATAAATTAAAAAGAATTTATTATATTACGCGAAtatatt                                                          >  1:622052/1‑139 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTTTGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATATTc                                                         >  2:1279054/1‑141 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATATATATATTTATAA‑GGCAATTAAATTAAAATGAATTTATTATCTTCCGCTATTATAGta                                                         >  1:2069504/1‑140 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTTATTTATTATGTTAACACTCTTATATATATATTTATAA‑GGCAATTAAATTAAAAGGAATTTATTATGATACGCTATtatatta                                                         >  1:1679028/1‑138 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTCATTTATTTTGTTAACACTCTTATCTATAAATTTATAA‑GGCAATTAAATTAAAAGGAATTTATTATATTCCGCTATTATATTc                                                         >  1:1036175/1‑141 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTCATTTATTATTTTGACTCTCGTATATATATATTTATAA‑GGCAAATAAATTAAAAGGAATTTATTATATTACCCTATtatatta                                                         >  1:1094264/1‑138 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑TGCAATTAAATGAAAATGAATTTATTATCTTACGCTATTATAGTc                                                         >  2:1995987/1‑141 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTAAGTTCAATCTAGTATATATATATTTATAA‑CTCAATTAAAATAAAAGGAATTTATTATATTAAGCTAATATATTc                                                         >  2:624121/1‑141 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTAAATTTTGAATTATTAAGTTAACAATCTAATATATAAAATTATAA‑GGCAATTAAATTAAAAAAAATTTATTATCTAACGCTAATATAGTc                                                         >  1:1101772/1‑141 (MQ=255)

                                                                                  tCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTGTTATTTTTTGATTTATTATGTTCACACTATTATGAATATATTTATAA‑TGCAAATAAATTAAAAGGTATTTATTATGTTCCGGTTTTATATTc                                                         >  1:324260/1‑141 (MQ=255)

                                                                                    gTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTTTTATGTTCACTCTCGTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTACGCTATTATAGTCGc                                                       >  2:448280/1‑141 (MQ=255)

                                                                                    gTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTTTGTTCACTCTCTTATCTATATATTTATAA‑GGCAAATAAATGAAAAGGAAATTATTTTCTTACGCGATTATAGTCGc                                                       >  1:888161/1‑141 (MQ=255)

                                                                                    gTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTAATTTATTATTTTGACTCTCTTATATATATATTTATAA‑TGCAATTAAATGAAAATGAATTTATTATATTACGCGATTATAGTAGc                                                       >  1:888158/1‑141 (MQ=255)

                                                                                     tGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGcc                                                      <  1:1277546/141‑1 (MQ=255)

                                                                                     tGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTATTTTTTTAACGATCTTATCTATATATTTATAA‑GGCAAATAAATTAAAAGGAATTTATTATATTACGCTATTATATTAGcc                                                      >  1:1735094/1‑141 (MQ=255)

                                                                                      gAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTATTTTTTGATTTATTTTTTTGACTCTCTTATCGATATATTTTTAA‑GGCAATTAAATGAAAAGGTATTTATTATATTACGCGATTATAGTCGCca                                                     >  1:1633231/1‑141 (MQ=255)

                                                                                           ttattattttattTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATg                                                <  2:1179078/141‑1 (MQ=255)

                                                                                                 ttttatttATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTc                                          <  2:422939/141‑1 (MQ=255)

                                                                                                                    gCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGtgatg                       <  2:1825241/141‑1 (MQ=255)

                                                                                                                     cGTGTAGTGGCGATTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGtgatga                      <  2:1210241/141‑1 (MQ=255)

                                                                                                                                  tttCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATTAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTTATGATAAAAAAGCCGaa         <  2:1409698/141‑1 (MQ=255)

                                                                                                                                  tttCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGaa         <  2:1797202/141‑1 (MQ=255)

                                                                                                                                     cTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGGCTGACGGGTTGTGATGATAAAAAAGCCGAAACa      >  1:995246/1‑141 (MQ=255)

                                                                                                                                         tttCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGaaa  <  1:1995987/141‑1 (MQ=255)

CGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAA‑GGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAA  >  NC_000913/4086815‑4087092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`