Frequency Filtering Thresholds

Minimum Cutoff:       Maximum Cutoff:

Ignored Genes

Enter gene(s) separated by ',' ex: tpoB,folD

Ignored Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details
1857929 179484 SNP T→C
CJ019_00182
 hypothetical protein C316R (TGC→CGC)
1857930 3061793 SNP G→A
qedA_2
 Quinoprotein alcohol dehydrogenase (cytochromec) S592N (AGC→AAC)
1857933 690150 SNP T→G
bauC, PP_RS08750
 Putative 3-oxopropanoate dehydrogenase/tRNA-Val intergenic (+27/‑2432)
1857937 3440343 SNP A→C
CJ019_03266
 hypothetical protein S18R (AGC→CGC)
1857941 96480 SNP T→G
cynT, CJ019_00104
 Carbonic anhydrase 1/hypothetical protein intergenic (+121/‑72)
1857943 125463 SNP A→C
CJ019_00134
 hypothetical protein T309P (ACC→CCC)
1857946 188040 SNP A→C
CJ019_00185
 hypothetical protein T967P (ACC→CCC)
1857952 382484 SNP T→G
soxD
 Sarcosine oxidase subunit delta S14A (TCC→GCC)
1857953 395021 SNP A→C
yibF
 putative GST-like protein YibF P185P (CCT→CCG)
1857954 444535 SNP A→C
hdfR_1
 HTH-type transcriptional regulator HdfR L130V (TTG→GTG)
1857961 1005066 SNP A→C
prfC
 Peptide chain release factor RF3 D143A (GAC→GCC)
1857964 1138494 SNP T→G
pigA_1, hemR
 Heme oxygenase PigA/Hemin receptor intergenic (‑108/+33)
1857965 1188687 SNP A→C
CJ019_01117
 hypothetical protein S41R (AGC→CGC)
1857972 1508654 SNP T→G
ftsI
 Peptidoglycan D,D-transpeptidase FtsI L178R (CTG→CGG)
1857974 1528308 SNP A→C
argJ
 Arginine biosynthesis bifunctional protein ArgJ P87P (CCA→CCC)
1857978 1670696 SNP A→C
thrC_2, CJ019_01569
 Threonine synthase/hypothetical protein intergenic (+33/‑98)
1857980 1718463 SNP T→G
CJ019_01614
 hypothetical protein Q65P (CAG→CCG)
1857983 1891999 SNP A→C
PP_RS08755, napA
 tRNA-Asp/Periplasmic nitrate reductase intergenic (+13/‑507)
1857989 2094808 SNP A→C
CJ019_01995
 hypothetical protein L186R (CTG→CGG)
1857990 2134732 SNP T→G
comEC
 ComE operon protein 3 L471V (TTG→GTG)
1857992 2266996 SNP T→G
CJ019_02153
 putative HTH-type transcriptional regulator N143T (AAC→ACC)
1857994 2391010 SNP T→G
bvgS
 Virulence sensor protein BvgS E566D (GAA→GAC)
1857995 2391020 SNP T→G
bvgS
 Virulence sensor protein BvgS Q563P (CAG→CCG)
1857996 2491272 SNP A→C
iutA
 Ferric aerobactin receptor H33P (CAC→CCC)
1858012 3202757 SNP A→T
hcf136_2
 Ycf48-like protein V308V (GTA→GTT)
1858014 3267810 SNP T→G
eamA
 putative amino-acid metabolite efflux pump L171V (TTG→GTG)
1858015 3312451 SNP A→C
cynR_3
 HTH-type transcriptional regulator CynR L251R (CTG→CGG)
1858021 3626117 SNP A→C
hcf136_3
 Ycf48-like protein T178P (ACC→CCC)
1858022 3793904 SNP A→C
CJ019_03601, argD_3
 hypothetical protein/Acetylornithine/succinyldiaminopimelateaminotrans ferase intergenic (+57/+22)
1858025 3934892 SNP A→C
CJ019_03719
 hypothetical protein V100G (GTG→GGG)
1858026 4135607 SNP A→C
tgnC
 (Z)-2-((N-methylformamido)methylene)-5-hydroxybu tyrolactone dehydrogenase Q32P (CAG→CCG)
1858027 4135612 SNP T→G
tgnC
 (Z)-2-((N-methylformamido)methylene)-5-hydroxybu tyrolactone dehydrogenase W34G (TGG→GGG)
1858031 4245134 SNP A→C
CJ019_03982
 Crotonyl-CoA hydratase L182V (TTG→GTG)
1858032 4245145 SNP A→C
CJ019_03982
 Crotonyl-CoA hydratase L178R (CTG→CGG)
1858037 4690862 SNP T→G
yhaJ_2
 HTH-type transcriptional regulator YhaJ L281R (CTG→CGG)
1858038 4749286 SNP T→G
macB
 Macrolide export ATP-binding/permease proteinMacB S294A (TCG→GCG)
1858040 4805741 SNP A→T
dsbG, CJ019_04513
 Thiol:disulfide interchange protein DsbG/hypothetical protein intergenic (+161/‑588)
1858042 4845478 SNP T→G
apt, recR
 Adenine phosphoribosyltransferase/Recombination protein RecR intergenic (+47/+72)
1858043 4874567 SNP A→C
CJ019_04568, uacT_1
 hypothetical protein/Uric acid transporter UacT intergenic (+13/‑174)
1858044 4874607 SNP A→C
CJ019_04568, uacT_1
 hypothetical protein/Uric acid transporter UacT intergenic (+53/‑134)
1858045 4912863 SNP T→G
CJ019_04608
 hypothetical protein L480R (CTG→CGG)
1858046 4927692 SNP A→C
srp54
 Signal recognition particle 54 kDa protein W194G (TGG→GGG)
1858047 4942999 SNP A→C
fliN
 Flagellar motor switch protein FliN L51R (CTG→CGG)
1858060 5689794 SNP T→G
pyrC'
 Dihydroorotase-like protein R228R (CGT→CGG)
1858061 5689824 SNP T→G
pyrC'
 Dihydroorotase-like protein R238R (CGT→CGG)
1858066 5975253 SNP A→C
sasA_19
 Adaptive-response sensory-kinase SasA Q688P (CAG→CCG)
1858067 6016987 SNP A→C
puuB_8, CJ019_05632
 Gamma-glutamylputrescine oxidoreductase/hypothetical protein intergenic (+67/+77)
1858068 6021514 SNP T→G
ycaD_4
 putative MFS-type transporter YcaD S60R (AGC→CGC)
1858092 399292 SNP A→C
CJ019_00365, aceF
 hypothetical protein/Dihydrolipoyllysine-residue acetyltransferasecomponent of pyruvate dehydrogenase complex intergenic (‑186/+122)
1858098 759433 SNP A→C
mmuM_1, CJ019_00729
 Homocysteine S-methyltransferase/L-methionine gamma-lyase intergenic (+42/‑126)
1858102 1266383 SNP T→G
cysK_1, CJ019_01185
 Cysteine synthase/hypothetical protein intergenic (+121/+47)
1858103 1313943 SNP A→C
CJ019_01235
 hypothetical protein L614R (CTG→CGG)
1858104 1313950 SNP T→G
CJ019_01235
 hypothetical protein R612R (AGG→CGG)
1858108 1585043 SNP T→G
rhaS_1, CJ019_01492
 HTH-type transcriptional activator RhaS/hypothetical protein intergenic (‑94/‑109)
1858110 1670690 SNP A→C
thrC_2, CJ019_01569
 Threonine synthase/hypothetical protein intergenic (+27/‑104)
1858112 1720951 SNP T→G
plsB
 Glycerol-3-phosphate acyltransferase D90A (GAC→GCC)
1858116 2131359 SNP T→G
yadG
 putative ABC transporter ATP-binding proteinYadG R135R (CGT→CGG)
1858118 2203886 SNP A→C
CJ019_02088
 putative protein T74P (ACC→CCC)
1858131 3617883 SNP T→G
CJ019_03428
 2,6-dihydropseudooxynicotine hydrolase D186A (GAC→GCC)
1858140 3908501 SNP T→G
rstA_2, acrE_2
 Transcriptional regulatory protein RstA/Multidrug export protein AcrE intergenic (‑70/‑176)
1858142 3959315 SNP T→G
CJ019_03739, rlhA_2
 hypothetical protein/23S rRNA 5-hydroxycytidine synthase intergenic (+76/‑138)
1858143 3986622 SNP T→G
CJ019_03763
 hypothetical protein D31A (GAT→GCT)
1858145 4077164 SNP T→G
artJ_2
 ABC transporter arginine-binding protein 1 L173R (CTG→CGG)
1858147 4112358 SNP T→G
iorB_2
 Isoquinoline 1-oxidoreductase subunit beta V468G (GTC→GGC)
1858148 4131763 SNP T→G
CJ019_03889
 hypothetical protein E23A (GAG→GCG)
1858152 4502376 SNP A→C
cysG_1
 Siroheme synthase V17G (GTC→GGC)
1858153 4586078 SNP A→C
accA1
 Acetyl-/propionyl-coenzyme A carboxylase alphachain E230D (GAA→GAC)
1858168 5301183 SNP A→C
recC, PP_RS08750
 RecBCD enzyme subunit RecC/tRNA-Val intergenic (‑106/+3467)
1858174 6016995 SNP T→G
puuB_8, CJ019_05632
 Gamma-glutamylputrescine oxidoreductase/hypothetical protein intergenic (+75/+69)
1858175 6021519 SNP A→C
ycaD_4
 putative MFS-type transporter YcaD L58R (CTG→CGG)
1858179 690144 SNP A→G
bauC, PP_RS08750
 Putative 3-oxopropanoate dehydrogenase/tRNA-Val intergenic (+21/‑2438)
1858184 382476 SNP A→C
soxD
 Sarcosine oxidase subunit delta E11A (GAG→GCG)
1858185 515063 SNP G→A
mepM
 Murein DD-endopeptidase MepM D236D (GAC→GAT)
1858194 1670685 SNP A→C
thrC_2, CJ019_01569
 Threonine synthase/hypothetical protein intergenic (+22/‑109)
1858196 1791678 SNP T→G
lpxB
 Lipid-A-disaccharide synthase L182R (CTG→CGG)
1858198 1834908 SNP T→G
ldhA
 D-lactate dehydrogenase T38P (ACC→CCC)
1858203 2094817 SNP T→G
CJ019_01995
 hypothetical protein Q183P (CAG→CCG)
1858204 2231813 SNP A→C
emrA_2
 Colistin resistance protein EmrA G291G (GGT→GGG)
1858213 3440348 SNP T→G
CJ019_03266
 hypothetical protein A19A (GCT→GCG)
1858215 3761329 SNP A→C
CJ019_03574
 hypothetical protein E96A (GAG→GCG)
1858220 4092063 SNP A→C
CJ019_03853
 2-haloacrylate reductase V91G (GTC→GGC)
1858224 4245154 SNP T→G
CJ019_03982
 Crotonyl-CoA hydratase D175A (GAT→GCT)
1858227 4291840 SNP T→G
sdhL, CJ019_04025
 Shikimate dehydrogenase-like protein/hypothetical protein intergenic (‑142/‑20)
1858228 4434267 SNP A→C
dmlR_17, CJ019_04207
 HTH-type transcriptional regulator DmlR/hypothetical protein intergenic (+590/‑259)
1858231 4666745 SNP T→G
lasR, btuB_4
 Transcriptional activator protein LasR/Vitamin B12 transporter BtuB intergenic (‑90/‑131)
1858233 4789443 SNP A→C
dat
 Diaminobutyrate--2-oxoglutarateaminotransferase V230G (GTG→GGG)
1858243 5689816 SNP A→C
pyrC'
 Dihydroorotase-like protein S236R (AGC→CGC)
1858253 150743 SNP T→G
CJ019_00156
 hypothetical protein E27A (GAG→GCG)
1858260 656905 SNP A→C
yfhM
 Alpha-2-macroglobulin T241P (ACG→CCG)
1858261 759412 SNP C→G
mmuM_1, CJ019_00729
 Homocysteine S-methyltransferase/L-methionine gamma-lyase intergenic (+21/‑147)
1858262 759419 SNP A→C
mmuM_1, CJ019_00729
 Homocysteine S-methyltransferase/L-methionine gamma-lyase intergenic (+28/‑140)
1858263 1063986 SNP T→G
CJ019_01001
 hypothetical protein D151A (GAC→GCC)
1858269 1720958 SNP T→G
plsB
 Glycerol-3-phosphate acyltransferase T88P (ACC→CCC)
1858270 1720970 SNP A→C
plsB
 Glycerol-3-phosphate acyltransferase F84V (TTC→GTC)
1858271 1721870 SNP A→C
CJ019_01617
 hypothetical protein V98G (GTC→GGC)
1858273 1900316 SNP A→C
CJ019_01816
 2-ketogluconate reductase V160G (GTC→GGC)
1858280 2744444 SNP A→C
czcC_2
 Cobalt-zinc-cadmium resistance protein CzcC N64H (AAC→CAC)
1858283 2910766 SNP A→C
CJ019_02759
 hypothetical protein K2243N (AAA→AAC)
1858286 3210887 SNP A→C
oprJ_2
 Outer membrane protein OprJ Q206P (CAG→CCG)
1858288 3285727 SNP A→C
tamB
 Translocation and assembly module subunit TamB T652P (ACT→CCT)
1858289 3308725 SNP A→C
CJ019_03110
 hypothetical protein L164R (CTG→CGG)
1858291 3491319 SNP A→C
CJ019_03306, CJ019_03307
 hypothetical protein/hypothetical protein intergenic (‑681/+40)
1858292 3491323 SNP T→G
CJ019_03306, CJ019_03307
 hypothetical protein/hypothetical protein intergenic (‑685/+36)
1858295 3912321 SNP T→G
mexB_2
 Multidrug resistance protein MexB S820A (TCG→GCG)
1858297 3969776 SNP A→C
CJ019_03750
 putative protein L246R (CTG→CGG)
1858299 4029463 SNP A→C
mcpU_3
 Methyl-accepting chemotaxis protein McpU D290A (GAC→GCC)
1858300 4030329 SNP T→G
mcpU_3
 Methyl-accepting chemotaxis protein McpU F579V (TTT→GTT)
1858306 4289845 SNP T→G
CJ019_04021, gloA
 hypothetical protein/Lactoylglutathione lyase intergenic (+119/‑106)
1858316 5685825 SNP G→C
CJ019_05336
 hypothetical protein P122P (CCG→CCC)
1858320 5850615 SNP T→G
CJ019_05478
 putative membrane protein V236G (GTG→GGG)
1858326 399304 SNP T→G
CJ019_00365, aceF
 hypothetical protein/Dihydrolipoyllysine-residue acetyltransferasecomponent of pyruvate dehydrogenase complex intergenic (‑198/+110)
1858328 482474 SNP A→C
surA_1
 Chaperone SurA V67G (GTG→GGG)
1858335 868338 SNP A→C
loiP, mneA
 Metalloprotease LoiP/Putative manganese exporter intergenic (+27/+19)
1858340 1388322 SNP T→G
ruvB_1
 Holliday junction ATP-dependent DNA helicaseRuvB L336V (TTG→GTG)
1858345 1630540 SNP A→C
czcS
 Sensor protein CzcS L419R (CTG→CGG)
1858347 1744031 SNP G→C
CJ019_01649
 hypothetical protein A92P (GCC→CCC)
1858354 2503742 SNP T→G
copA_2
 Copper resistance protein A Q349P (CAG→CCG)
1858356 2569872 SNP A→C
acoR_3
 Acetoin catabolism regulatory protein L518R (CTG→CGG)
1858360 2721707 SNP C→T
gcvA_7
 Glycine cleavage system transcriptionalactivator S126S (TCC→TCT)
1858363 3237345 SNP A→C
dinG_3, CJ019_03036
 3'-5' exonuclease DinG/hypothetical protein intergenic (+76/+25)
1858364 3308718 SNP A→C
CJ019_03110
 hypothetical protein R166R (CGT→CGG)
1858369 3763787 SNP A→C
CJ019_03576
 hypothetical protein E44A (GAG→GCG)
1858371 3947782 SNP A→C
CJ019_03732
 hypothetical protein L129R (CTG→CGG)
1858373 3989982 SNP A→C
CJ019_03768, CJ019_03769
 hypothetical protein/hypothetical protein intergenic (+15/+30)
1858375 4042017 SNP A→C
quiA
 Quinate/shikimate dehydrogenase (quinone) D308A (GAC→GCC)
1858383 4749309 SNP C→G
macB
 Macrolide export ATP-binding/permease proteinMacB V301V (GTC→GTG)
1858385 4817421 SNP A→C
lgrB_2
 Linear gramicidin synthase subunit B L2531R (CTG→CGG)
1858386 4893888 SNP A→C
lrpC, pucI_2
 HTH-type transcriptional regulator LrpC/putative allantoin permease intergenic (+26/‑472)
1858388 5096964 SNP G→C
CJ019_04792, CJ019_04793
 Putative pterin-4-alpha-carbinolaminedehydratase/hypothetical protein intergenic (+70/‑120)
1858389 5122692 SNP A→C
slyA_2
 Transcriptional regulator SlyA L80R (CTG→CGG)
1858391 5267269 SNP A→C
rlmG
 Ribosomal RNA large subunit methyltransferase G D197A (GAC→GCC)
1858393 5546108 SNP T→G
CJ019_05222
 hypothetical protein V504G (GTG→GGG)
1858394 5689790 SNP T→G
pyrC'
 Dihydroorotase-like protein V227G (GTG→GGG)
1858395 5809389 SNP C→A
ftsN, CJ019_05436
 Cell division protein FtsN/hypothetical protein intergenic (+38/+53)
1858397 5844716 SNP A→C
ilvD
 Dihydroxy-acid dehydratase E529A (GAG→GCG)
1858399 5975241 SNP T→G
sasA_19
 Adaptive-response sensory-kinase SasA L684R (CTG→CGG)
1858400 5975263 SNP A→C
sasA_19
 Adaptive-response sensory-kinase SasA P691P (CCA→CCC)
1858408 288790 SNP C→G
CJ019_00262, CJ019_00263
 hypothetical protein/hypothetical protein intergenic (+90/+52)
1858415 752516 SNP A→C
CJ019_00719, CJ019_00721
 hypothetical protein/hypothetical protein intergenic (+438/‑396)
1858416 778930 SNP C→G
CJ019_00742
 hypothetical protein A16P (GCA→CCA)
1858419 1378944 SNP T→G
oprD_6
 Porin D N189T (AAC→ACC)
1858424 1831738 SNP T→G
CJ019_01748
 NAD(P)H dehydrogenase (quinone) S163R (AGC→CGC)
1858428 2387001 SNP A→C
CJ019_02252, dacC_1
 hypothetical protein/D-alanyl-D-alanine carboxypeptidase DacC intergenic (+70/+36)
1858429 2417619 SNP A→C
yegS
 Lipid kinase YegS D44A (GAC→GCC)
1858431 2471589 SNP G→A
CJ019_02330
 hypothetical protein L45L (CTG→CTA)
1858438 3786897 SNP T→G
thlA_2
 Acetyl-CoA acetyltransferase D245A (GAC→GCC)
1858442 4287611 SNP T→G
CJ019_04019
 hypothetical protein D13A (GAC→GCC)
1858465 6174824 SNP T→G
atpB
 ATP synthase subunit a N153T (AAC→ACC)
2132743 44301 DEL (T)9→8
oprD_1, czcR_2
 Porin D/Transcriptional activator protein CzcR intergenic (+132/‑359)
2132744 120983 DEL (T)9→8
polA, engB
 DNA polymerase I/putative GTP-binding protein EngB intergenic (+280/+92)
2132745 5757239 DEL (A)6→5
CJ019_05400
 hypothetical protein coding (781/834 nt)
2132746 2817575 SNP A→T
iorB_1
 Isoquinoline 1-oxidoreductase subunit beta E44V (GAG→GTG)
2132747 2817578 SNP C→G
iorB_1
 Isoquinoline 1-oxidoreductase subunit beta A45G (GCG→GGG)
2132748 2817582 SNP T→G
iorB_1
 Isoquinoline 1-oxidoreductase subunit beta A46A (GCT→GCG)
2132749 3459898 SNP T→G
CJ019_03284
 hypothetical protein A20A (GCA→GCC)
2132750 3459905 SNP G→C
CJ019_03284
 hypothetical protein A18G (GCC→GGC)
2132751 3577948 SNP A→G
benC, lvr
 Benzoate 1,2-dioxygenase electron transfercomponent/Levodione reductase intergenic (+38/‑97)
2132752 4409322 SNP G→A
CJ019_04171, CJ019_04172
 hypothetical protein/hypothetical protein intergenic (‑29/‑121)
2132753 5503722 SNP A→C
CJ019_05179
 hypothetical protein Q32P (CAG→CCG)
2132761 1188694 SNP T→G
CJ019_01117
 hypothetical protein L43R (CTG→CGG)
2132762 1542086 SNP G→C
CJ019_01454, groS
 hypothetical protein/10 kDa chaperonin intergenic (+15/‑230)
2132763 1542090 SNP A→C
CJ019_01454, groS
 hypothetical protein/10 kDa chaperonin intergenic (+19/‑226)
2132766 2858531 SNP C→G
nicP_5, galA
 Porin-like protein NicP/Gallate dioxygenase intergenic (‑92/+40)
2132767 6039029 SNP T→G
CJ019_05655
 hypothetical protein P10P (CCA→CCC)
2132771 1740407 SNP T→G
CJ019_01643
 hypothetical protein E53A (GAG→GCG)
2132774 4667202 SNP G→C
btuB_4
 Vitamin B12 transporter BtuB A109A (GCG→GCC)
2132775 6064608 SNP G→C
cheB_5, phoU
 Protein-glutamatemethylesterase/protein-glutamine glutaminase/Phosphate-specific transport system accessoryprotein PhoU intergenic (‑129/+34)
2132777 378525 SNP A→C
mcpH_1, ltaE
 Methyl-accepting chemotaxis protein McpH/Low specificity L-threonine aldolase intergenic (+15/+20)
2132778 3285371 SNP T→G
tamB
 Translocation and assembly module subunit TamB L533R (CTC→CGC)
2132781 4497420 INS +G
dsrE
 Putative sulfurtransferase DsrE coding (11/477 nt)
2132784 5262767 SNP A→C
uacT_2, radA
 Uric acid transporter UacT/DNA repair protein RadA intergenic (+9/+27)
2132785 5456219 SNP T→G
CJ019_05132, ykfA
 Tn3 family transposase TnXax1/putative murein peptide carboxypeptidase intergenic (+16/+18)
2132786 1157983 SNP A→C
hexR_1
 HTH-type transcriptional regulator HexR S162A (TCG→GCG)
2132787 1304838 SNP T→C
CJ019_01223, rapA
 putative signaling protein/RNA polymerase-associated protein RapA intergenic (‑253/+25)
2132788 1839352 SNP A→C
pfeS_2
 Sensor protein PfeS D196A (GAT→GCT)
2132789 2950201 SNP T→G
spuC_2, puuC_1
 Putrescine--pyruvate aminotransferase/NADP/NAD-dependent aldehyde dehydrogenase PuuC intergenic (+99/‑97)
2132790 1225658 SNP A→C
glpD
 Aerobic glycerol-3-phosphate dehydrogenase A34A (GCT→GCG)
2132791 2147052 SNP C→G
CJ019_02033, yceF
 hypothetical protein/7-methyl-GTP pyrophosphatase intergenic (+48/+162)
2132796 2817575 SNP A→C
iorB_1
 Isoquinoline 1-oxidoreductase subunit beta E44A (GAG→GCG)
2132797 4340801 AMP 5,800 bp x 2
CJ019_04077,gtaB,tsdA,CJ019_04082,CJ019_04083,CJ019_04084,CJ019_04085,nmoA
 CJ019_04077,gtaB,tsdA,CJ019_04082,CJ019_04083,CJ019_04084,CJ019_04085,[nmoA] duplication
2132798 4347301 AMP 39,100 bp x 2
nmoA,modA,cysT_1,btuD_8,PP_RS08755,PP_RS08765,CJ019_04090,csrA1,tcrX,kaiC,CJ019_04094,CJ019_04095,PP_RS08755,PP_RS08765,yphA,CJ019_04098,adhP,CJ019_04100,CJ019_04101,CJ019_04102,CJ019_04103,CJ019_04104,CJ019_04105,spuD_4,ramA_3,CJ019_04108,CJ019_04109,CJ019_04110,CJ019_04111,CJ019_04112,CJ019_04113,CJ019_04114,CJ019_04115,CJ019_04116,CJ019_04117,CJ019_04118,CJ019_04119,CJ019_04120,CJ019_04121,CJ019_04122,CJ019_04123,CJ019_04124,CJ019_04125,CJ019_04126,CJ019_04127,CJ019_04128,CJ019_04129,CJ019_04130,CJ019_04131,CJ019_04132,CJ019_04133,CJ019_00698
 [nmoA],modA,cysT_1,btuD_8,PP_RS08755,PP_RS08765,CJ019_04090,csrA1,tcrX,kaiC,CJ019_04094,CJ019_04095,PP_RS08755,PP_RS08765,yphA,CJ019_04098,adhP,CJ019_04100,CJ019_04101,CJ019_04102,CJ019_04103,CJ019_04104,CJ019_04105,spuD_4,ramA_3,CJ019_04108,CJ019_04109,CJ019_04110,CJ019_04111,CJ019_04112,CJ019_04113,CJ019_04114,CJ019_04115,CJ019_04116,CJ019_04117,CJ019_04118,CJ019_04119,CJ019_04120,CJ019_04121,CJ019_04122,CJ019_04123,CJ019_04124,CJ019_04125,CJ019_04126,CJ019_04127,CJ019_04128,CJ019_04129,CJ019_04130,CJ019_04131,CJ019_04132,CJ019_04133,[CJ019_00698] duplication
2132802 2322212 SNP T→G
fadB_1
 Fatty acid oxidation complex subunit alpha L248W (TTG→TGG)
2132803 2738237 SNP A→C
CJ019_02581, CJ019_02582
 hypothetical protein/hypothetical protein intergenic (+23/+12)
2132804 3436586 SNP T→G
CJ019_03261
 hypothetical protein F763C (TTT→TGT)
2132806 5992321 SNP A→C
CJ019_05611, ycaC_4
 hypothetical protein/putative hydrolase YcaC intergenic (‑88/+30)
2132807 5992325 SNP A→C
CJ019_05611, ycaC_4
 hypothetical protein/putative hydrolase YcaC intergenic (‑92/+26)
2132808 641302 SNP G→C
acoR_2, accC
 Acetoin catabolism regulatory protein/Biotin carboxylase intergenic (+21/+70)
2132809 3436588 SNP G→T
CJ019_03261
 hypothetical protein G764W (GGG→TGG)
2132810 4245153 SNP A→C
CJ019_03982
 Crotonyl-CoA hydratase D175E (GAT→GAG)
2132811 378521 SNP C→G
mcpH_1, ltaE
 Methyl-accepting chemotaxis protein McpH/Low specificity L-threonine aldolase intergenic (+11/+24)
2132812 378527 SNP G→C
mcpH_1, ltaE
 Methyl-accepting chemotaxis protein McpH/Low specificity L-threonine aldolase intergenic (+17/+18)
2132813 3229202 SNP A→C
garD_1
 Galactarate dehydratase (L-threo-forming) T414P (ACC→CCC)
2132814 3491323 SNP T→A
CJ019_03306, CJ019_03307
 hypothetical protein/hypothetical protein intergenic (‑685/+36)
2132815 6178230 SNP T→G
mnmG
 tRNA uridine 5-carboxymethylaminomethylmodification enzyme MnmG K619N (AAA→AAC)
2132817 216910 SNP A→C
nrtD_1
 Nitrate import ATP-binding protein NrtD H231P (CAC→CCC)
2132818 2880608 SNP A→C
hisC_5
 Histidinol-phosphate aminotransferase L373R (CTG→CGG)
2132820 5128812 SNP T→G
CJ019_04823, aer_3
 hypothetical protein/Aerotaxis receptor intergenic (‑47/+18)
2132821 1106887 SNP T→G
hupB_1, rlmF
 DNA-binding protein HRm/Ribosomal RNA large subunit methyltransferase F intergenic (+30/+18)
2132822 1106891 SNP C→G
hupB_1, rlmF
 DNA-binding protein HRm/Ribosomal RNA large subunit methyltransferase F intergenic (+34/+14)
2132823 2856886 SNP T→G
hdfR_4
 HTH-type transcriptional regulator HdfR S297A (TCG→GCG)
2132824 5188721 SNP G→T
CJ019_04882, pxpC_2
 hypothetical protein/5-oxoprolinase subunit C intergenic (+37/+16)
2132826 3995418 SNP T→G
dmoA_3, allE
 Dimethyl-sulfide monooxygenase/(S)-ureidoglycine aminohydrolase intergenic (+90/‑44)
2132828 5147133 SNP T→G
ybdG_2, bioP
 Miniconductance mechanosensitive channel YbdG/Biotin transporter intergenic (+187/+30)

Starting Strain Mutations

Mut ID Position Mutation Type Sequence Change Gene Function Product GO Process GO Component Details