New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3690291 =	58 (1.550)	4 (0.110)	4/266	4.3	6.9%	coding (2317/2340 nt)	bcsB	regulator of cellulose synthase, cyclic di‑GMP binding
	?	NC_000913	= 3690287	54 (1.550)					coding (2321/2340 nt)	bcsB	regulator of cellulose synthase, cyclic di‑GMP binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAATAAA  >  NC_000913/3690148‑3690437                                                                                                                                                |                                                                                                                                                   ctgactgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACGGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac                                                                                                                                               <  6:15868/149‑1 (MQ=255)             aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTc                                                                                                                                   <  3:33828/149‑1 (MQ=255)              tCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCgcag                                                                                                                               >  8:5313/1‑149 (MQ=255)                   tttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgca                                                                                                                                <  6:45024/146‑1 (MQ=255)                   tttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgca                                                                                                                                >  5:45024/1‑146 (MQ=255)                    ttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGcagcag                                                                                                                            >  7:6715/1‑149 (MQ=255)                        aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGc                                                                                                                        >  7:34525/1‑149 (MQ=255)                             tCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAg                                                                                                                   >  3:124731/1‑149 (MQ=255)                               ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTa                                                                                                                 >  3:27987/1‑149 (MQ=255)                                        ccAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGc                                                                                                      >  1:78979/1‑148 (MQ=255)                                         cAGGTACAGGCTGCCTGAACACTAAAGGTAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAg                                                                                                       >  4:121347/1‑149 (MQ=255)                                                 ggCTGCCTGAACACTAAAGGTAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATca                                                                                               <  3:121347/149‑1 (MQ=255)                                                      ccTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACt                                                                                           >  5:5583/1‑148 (MQ=255)                                                        tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag                                                                                                                               <  4:34671/110‑1 (MQ=255)                                                        tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag                                                                                                                               >  3:34671/1‑110 (MQ=255)                                                        tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGa                                                                                         >  8:93475/1‑148 (MQ=255)                                                         gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgc                                                                                                                                 <  7:7929/107‑1 (MQ=255)                                                         gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgc                                                                                                                                 >  8:7929/1‑107 (MQ=255)                                                         gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGa                                                                                         >  8:124881/1‑147 (MQ=255)                                                          aaCACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAg                                                                                      >  6:159419/1‑149 (MQ=255)                                                            cacTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                    <  8:34525/149‑1 (MQ=255)                                                             acTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgccg                                                                                   >  5:142668/1‑149 (MQ=255)                                                             acTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgccg                                                                                   >  1:166139/1‑149 (MQ=255)                                                               tAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                    >  4:41726/1‑146 (MQ=255)                                                               tAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                    <  3:41726/146‑1 (MQ=255)                                                                 aaGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccag                                                                               <  7:93475/149‑1 (MQ=255)                                                                 aaGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccag                                                                               <  5:31119/149‑1 (MQ=255)                                                                        ccagcAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgc                                                                         >  2:163912/1‑148 (MQ=255)                                                                          agcagcagcATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                      <  4:124731/149‑1 (MQ=255)                                                                          agcagcagcATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                      <  5:159419/149‑1 (MQ=255)                                                                           gcagcagcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccagc                                                                     <  6:5583/149‑1 (MQ=255)                                                                             agcagcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCcagcag                                                                   <  8:6715/149‑1 (MQ=255)                                                                                 gcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATc                                                               <  1:29720/149‑1 (MQ=255)                                                                                  caTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGAt                                                           <  2:78979/149‑1 (MQ=255)                                                                                   aTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATg                                                          <  7:5313/149‑1 (MQ=255)                                                                                               ccACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGAAGTTATGCCAg                                                 >  2:89157/1‑149 (MQ=255)                                                                                                 aCTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCcaca                                                                                                                    <  8:25611/80‑1 (MQ=255)                                                                                                 aCTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCcaca                                                                                                                    >  7:25611/1‑80 (MQ=255)                                                                                                        aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCa                                                  >  8:45226/1‑139 (MQ=255)                                                                                                        aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCa                                                  <  7:45226/139‑1 (MQ=255)                                                                                                        aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACca                                        >  6:25642/1‑149 (MQ=255)                                                                                                        aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTCCCAGCGCATACca                                        >  7:34718/1‑149 (MQ=255)                                                                                                             aTTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                      <  3:101278/114‑1 (MQ=255)                                                                                                             aTTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                      >  4:101278/1‑114 (MQ=255)                                                                                                               tCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACgcgc                                 >  4:122970/1‑149 (MQ=255)                                                                                                                cATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAat                                                                                                   >  5:52386/1‑82 (MQ=255)                                                                                                                cATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAat                                                                                                   <  6:52386/82‑1 (MQ=255)                                                                                                                   cTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGa                             >  7:98889/1‑149 (MQ=255)                                                                                                                      cAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCg                              <  4:27987/145‑1 (MQ=255)                                                                                                                      cAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAAc                           <  1:163912/148‑1 (MQ=255)                                                                                                                             tCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAgc                                                >  2:175881/1‑120 (MQ=255)                                                                                                                             tCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAgc                                                <  1:175881/120‑1 (MQ=255)                                                                                                                              cGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACgg                      >  6:72152/1‑145 (MQ=255)                                                                                                                               gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCgg                                                             >  6:30731/1‑105 (MQ=255)                                                                                                                               gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCgg                                                             <  5:30731/105‑1 (MQ=255)                                                                                                                               gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAg                   <  2:108383/147‑1 (MQ=255)                                                                                                                                ttATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATg                <  3:122970/149‑1 (MQ=255)                                                                                                                                          tAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGtaa      >  8:125628/1‑149 (MQ=255)                                                                                                                                           aaGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAAATGACCTACGtaa      >  3:20228/1‑148 (MQ=255)                                                                                                                                             gacgacgacgacTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGtaataa   <  6:142668/149‑1 (MQ=255)                                                                                                                                              acgacgacgacTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAATaaa  >  2:90134/1‑149 (MQ=255)                                                                                                                                              acgacgacgacTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAATaaa  >  3:117031/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                   CTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAATAAA  >  NC_000913/3690148‑3690437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.