New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3690291 =	58 (1.550)	4 (0.110)	4/266	4.3	6.9%	coding (2317/2340 nt)	bcsB	regulator of cellulose synthase, cyclic di‑GMP binding
	?	NC_000913	= 3690287	54 (1.550)					coding (2321/2340 nt)	bcsB	regulator of cellulose synthase, cyclic di‑GMP binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAA  >  NC_000913/3690139‑3690433                                                                                                                                                     |                                                                                                                                                   gcgcCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTaa                                                                                                                                                    <  5:74002/149‑1 (MQ=255)   gcCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAga                                                                                                                                                  <  3:82397/149‑1 (MQ=255)     ccTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgac                                                                                                                                                 >  1:108383/1‑148 (MQ=255)          ctgactgaTGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACGGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAgacgacgac                                                                                                                                           <  6:15868/149‑1 (MQ=255)                      aTCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTc                                                                                                                               <  3:33828/149‑1 (MQ=255)                       tCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCgcag                                                                                                                           >  8:5313/1‑149 (MQ=255)                            tttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgca                                                                                                                            >  5:45024/1‑146 (MQ=255)                            tttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgca                                                                                                                            <  6:45024/146‑1 (MQ=255)                             ttAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGcagcag                                                                                                                        >  7:6715/1‑149 (MQ=255)                                 aCTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGc                                                                                                                    >  7:34525/1‑149 (MQ=255)                                      tCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAg                                                                                                               >  3:124731/1‑149 (MQ=255)                                        ccAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTa                                                                                                             >  3:27987/1‑149 (MQ=255)                                                 ccAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGc                                                                                                  >  1:78979/1‑148 (MQ=255)                                                  cAGGTACAGGCTGCCTGAACACTAAAGGTAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAg                                                                                                   >  4:121347/1‑149 (MQ=255)                                                          ggCTGCCTGAACACTAAAGGTAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATca                                                                                           <  3:121347/149‑1 (MQ=255)                                                               ccTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACt                                                                                       >  5:5583/1‑148 (MQ=255)                                                                 tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag                                                                                                                           <  4:34671/110‑1 (MQ=255)                                                                 tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgcag                                                                                                                           >  3:34671/1‑110 (MQ=255)                                                                 tGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGa                                                                                     >  8:93475/1‑148 (MQ=255)                                                                  gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgc                                                                                                                             <  7:7929/107‑1 (MQ=255)                                                                  gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCgc                                                                                                                             >  8:7929/1‑107 (MQ=255)                                                                  gAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGa                                                                                     >  8:124881/1‑147 (MQ=255)                                                                   aaCACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAg                                                                                  >  6:159419/1‑149 (MQ=255)                                                                     cacTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                <  8:34525/149‑1 (MQ=255)                                                                      acTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgccg                                                                               >  1:166139/1‑149 (MQ=255)                                                                      acTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgccg                                                                               >  5:142668/1‑149 (MQ=255)                                                                        tAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                <  3:41726/146‑1 (MQ=255)                                                                        tAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAgcc                                                                                >  4:41726/1‑146 (MQ=255)                                                                          aaGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccag                                                                           <  7:93475/149‑1 (MQ=255)                                                                          aaGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccag                                                                           <  5:31119/149‑1 (MQ=255)                                                                                 ccagcAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgc                                                                     >  2:163912/1‑148 (MQ=255)                                                                                   agcagcagcATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                  <  5:159419/149‑1 (MQ=255)                                                                                   agcagcagcATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                  <  4:124731/149‑1 (MQ=255)                                                                                    gcagcagcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccagc                                                                 <  6:5583/149‑1 (MQ=255)                                                                                      agcagcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCcagcag                                                               <  8:6715/149‑1 (MQ=255)                                                                                          gcaTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATc                                                           <  1:29720/149‑1 (MQ=255)                                                                                           caTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGAt                                                       <  2:78979/149‑1 (MQ=255)                                                                                            aTCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAA‑‑‑GACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATg                                                      <  7:5313/149‑1 (MQ=255)                                                                                                        ccACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGAAGTTATGCCAg                                             >  2:89157/1‑149 (MQ=255)                                                                                                          aCTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCcaca                                                                                                                <  8:25611/80‑1 (MQ=255)                                                                                                          aCTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCcaca                                                                                                                >  7:25611/1‑80 (MQ=255)                                                                                                                 aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCa                                              >  8:45226/1‑139 (MQ=255)                                                                                                                 aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCa                                              <  7:45226/139‑1 (MQ=255)                                                                                                                 aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACca                                    >  6:25642/1‑149 (MQ=255)                                                                                                                 aaCACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTCCCAGCGCATACca                                    >  7:34718/1‑149 (MQ=255)                                                                                                                      aTTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                  <  3:101278/114‑1 (MQ=255)                                                                                                                      aTTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGccgccagcaccgccag                                                                  >  4:101278/1‑114 (MQ=255)                                                                                                                        tCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACgcgc                             >  4:122970/1‑149 (MQ=255)                                                                                                                         cATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAat                                                                                               <  6:52386/82‑1 (MQ=255)                                                                                                                         cATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAat                                                                                               >  5:52386/1‑82 (MQ=255)                                                                                                                            cTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGa                         >  7:98889/1‑149 (MQ=255)                                                                                                                               cAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCg                          <  4:27987/145‑1 (MQ=255)                                                                                                                               cAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAAc                       <  1:163912/148‑1 (MQ=255)                                                                                                                                      tCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAgc                                            <  1:175881/120‑1 (MQ=255)                                                                                                                                      tCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAgc                                            >  2:175881/1‑120 (MQ=255)                                                                                                                                       cGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACgg                  >  6:72152/1‑145 (MQ=255)                                                                                                                                        gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCgg                                                         <  5:30731/105‑1 (MQ=255)                                                                                                                                        gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCgg                                                         >  6:30731/1‑105 (MQ=255)                                                                                                                                        gTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAg               <  2:108383/147‑1 (MQ=255)                                                                                                                                         ttATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATg            <  3:122970/149‑1 (MQ=255)                                                                                                                                                   tAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGtaa  >  8:125628/1‑149 (MQ=255)                                                                                                                                                    aaGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAAATGACCTACGtaa  >  3:20228/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCGCCCTTCCTGACTGATGTAATCCTTTTTAAACTGCTCCCAGGCAGGCCAGGTACAGGCTGCCTGAACACTAAAGGCAGCCAGCAGCAGCATCGTCACGATTCCACTACGCAACACATTCATCTTCAATTACTCGTTATCCGGGTTAAGACGACGACGACTAATAATTCGCAGCAGACGCCACAGTACCCATGCCAGCAATATCACACTGATAGCCGCCAGCACCGCCAGCAGAATCGGATGGTTTGCCAGCGCATACCACACGCGCTCGAACCACGGCAGATGACCTACGTAA  >  NC_000913/3690139‑3690433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.