Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,463,556 IS2 (+) +5 bp 35.4% coding (633‑637/984 nt) gspK → general secretory pathway component, cryptic

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)25 (0.290) 21/264 NT 31.6% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 3463560 52 (0.620)coding (637/984 nt) gspK general secretory pathway component, cryptic
* ? NC_000913 = 3187426NA (NA)32 (0.370) 27/264 NT 37.2% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 3463556 = 52 (0.620)coding (633/984 nt) gspK general secretory pathway component, cryptic

CAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3187291‑3187426
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTT  >  NC_000913/3463556‑3463703
                                                                                                                                                                                                                                                                                            
CAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGC                                                                                                                                         <  8:377546/149‑1
 AGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTATTGGGTTAAGTGATATCAGATGTCTGGATATATAGGGGCTAATCCACCCGGAACTTAGCA                                                                                                                                        >  2:98819/1‑149
 AGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGATCGCAACAGGAATATCTGCGGCAGCGGGCTTGTAATGGGTGAAGTGATAACAGATGTCTGTAAATATAGGGGCAAATCCACACGGAACTTAGCA                                                                                                                                        >  7:272567/1‑149
           GAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAA                                                                                                                              >  2:285694/1‑149
           GAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAA                                                                                                                              <  5:319262/149‑1
            AGCATTATAACGAATGGCATCCGCATAGTTCGCTGGGTTATCGCTCGCCACAGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAAT                                                                                                                             <  8:272567/149‑1
            AGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAAT                                                                                                                             <  2:386206/149‑1
              CATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATAT                                                                                                                           <  4:336354/149‑1
                    AACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAAC                                                                                                                     >  4:246511/1‑149
                          TGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAA                                                                                                               <  7:316859/149‑1
                                  tCATAGTGAGCTGGGTTATCGCTCGCAACGGTAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTTATAACAGATGTCTGGAAATATAGGGGCAAATACACAAGGAACTTAGCATCAATATTAATATGCTAACGGAGAACTATATTC                                                                                                       >  8:64733/2‑149
                                  GCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTC                                                                                                       <  4:339335/149‑1
                                          CGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTT                                                                                                <  1:285694/148‑1
                                                      GCTCGCGACGGGAATATCTGCGGCAGCTTGCTTGTAATGGGTTAAGTGTTAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATAAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTA                                                                                      <  1:246510/146‑1
                                                      GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGTGGCAAATCCACACGGAACTTAGAATCAATCTTAATATGCTAACGGAGAACGATATTCCGCACTTCAGAGCGATA                                                                                      >  2:246510/1‑146
                                                                      TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACG                                                                    <  3:246511/148‑1
                                                                                CGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCATCAATAACATCACGGATGCTGACGC                                                         >  3:54523/1‑149
                                                                                     TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGG                                                    >  7:48304/1‑149
                                                                                           TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTAT                                              >  7:22560/1‑149
                                                                                           TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTAT                                              >  5:325261/1‑149
                                                                                           TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGAT                                                                 >  5:206238/1‑130
                                                                                           TGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGAT                                                                 <  6:206238/130‑1
                                                                                               TTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACATTATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGC                                           >  7:190027/1‑148
                                                                                                TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCA                                          >  8:129167/1‑148
                                                                                                      ATAACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAtg                                   >  5:365270/1‑147
                                                                                                         ACAGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCC                                 >  7:252593/1‑148
                                                                                                           AGATGTCTGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAG                              >  1:334266/1‑149
                                                                                                                  TGGAAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGC                       >  1:323617/1‑149
                                                                                                                     AAATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGAAGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGG                    >  5:291123/1‑149
                                                                                                                       ATATAGGGGCAAATCCACACGGAACTTATCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCT                  <  5:133365/149‑1
                                                                                                                       ATATAGGGGCAAATCCACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGC                   >  3:329971/1‑148
                                                                                                                          aAGGGGCAAATCCACACGGAACTTAGCAGCAATCTTAATATGCTAACGGATAACGATATTCCGCTATTCAGAGCGTTATTCCTCAATAACATCACTGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAAC               <  1:98819/148‑1
                                                                                                                                       ACACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTT  <  8:22560/149‑1
                                                                                                                                       ACACGGAACTTAGCATCAATATTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGTATGCTGACGCTCGTGTCTTATTGCAAAAAAGGCAGAGGGAATGCTGGCTAACCACGGATCCATTT  >  5:16514/1‑149
                                                                                                                                                                                                                                                                                            
CAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3187291‑3187426
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTT  >  NC_000913/3463556‑3463703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.