| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4420746 | 34 (0.950) | 6 (0.180) | 6/234 | 3.4 | 16.7% | coding (767/1398 nt) | ulaA | L‑ascorbate‑specific enzyme IIC permease component of PTS |
| ? | NC_000913 | = 4420774 | 28 (0.830) | coding (795/1398 nt) | ulaA | L‑ascorbate‑specific enzyme IIC permease component of PTS | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACCTCAAATTGCCGGGCTGGCTGAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGCCTGATCCCAGGTGCGGTTCTGGC > NC_000913/4420634‑4420914 | gACCTCAAATTGCCGGGCTGGCTGAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTa < 4:158892/149‑1 (MQ=255) gctgAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTtct > 2:24844/1‑149 (MQ=255) ctgAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTtctc < 2:146288/149‑1 (MQ=255) aTTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGc < 3:26111/149‑1 (MQ=255) tttCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGTCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTtctc < 8:49976/141‑1 (MQ=255) tttCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGTCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTtctc > 7:49976/1‑141 (MQ=255) cACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTgg < 2:148874/148‑1 (MQ=255) tgaCCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGc > 4:101496/1‑135 (MQ=255) tgaCCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGc < 3:101496/135‑1 (MQ=255) ccATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGttt > 8:99958/1‑149 (MQ=255) ccATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGttt < 7:99958/149‑1 (MQ=255) cttcttTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGa > 3:112241/1‑113 (MQ=255) cttcttTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGa < 4:112241/113‑1 (MQ=255) cttcttTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTgg > 5:37872/1‑149 (MQ=255) tGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTgg > 4:85702/1‑132 (MQ=255) tGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTgg < 3:85702/132‑1 (MQ=255) gCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAg < 4:19227/112‑1 (MQ=255) gCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAg > 3:19227/1‑112 (MQ=255) gCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCAt > 8:129188/1‑149 (MQ=255) ctctCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCAtt > 2:119352/1‑149 (MQ=255) tctcCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAgg < 1:77906/111‑1 (MQ=255) tctcCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAgg > 2:77906/1‑111 (MQ=255) tATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCAttt < 7:129188/149‑1 (MQ=255) tCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTcc < 1:24844/149‑1 (MQ=255) cGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGcc < 1:119352/149‑1 (MQ=255) tGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATg > 2:148154/1‑80 (MQ=255) tGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATg < 1:148154/80‑1 (MQ=255) tGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGCCTGATCCCAGGTGCGGTTCTGGc > 1:3281/1‑148 (MQ=255) | GACCTCAAATTGCCGGGCTGGCTGAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGCCTGATCCCAGGTGCGGTTCTGGC > NC_000913/4420634‑4420914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |