New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3442513	45 (1.310)	4 (0.120)	4/242	3.9	8.6%	intergenic (‑42/+105)	rpsM/rpmJ	30S ribosomal subunit protein S13/50S ribosomal subunit protein L36
	?	NC_000913	= 3442518	42 (1.300)					intergenic (‑47/+100)	rpsM/rpmJ	30S ribosomal subunit protein S13/50S ribosomal subunit protein L36
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTAGAACGGGTCTTGCCGACGCCATAAATCGAAGTTAATGCGATTACGGCATGCTTATGATCAGGAATGTTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCTGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3442379‑3442513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaaaaCGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGCCA  <  NC_000913/3442518‑3442375                                                                                                                                                                                                                                                                                         TTTAGAACGGGTCTTGCCGACGCCATAAATCGAAGTTAATGCGTTTACGGCATGCTTATGATCAGGAATGTTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCTGAAAACGGGCTTTTCAGCA                                                                                                                                    >  2:174404/1‑149                             ATCGAAGTTAATGCGTTTACGGCATGCTTATGATCAGGAATGTTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCTGAAAACGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGT                                                                                                        <  1:174404/149‑1                              TCGAAGTTAATGCGATTACGGCATGCTTATGATCAGGAATGTTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCTGAAAACGGGCTTTTCATCATGGAACGTACATATTAAATAGTAGGTGTG                                                                                                       >  8:103535/1‑149                                              TACGGCATGCCTATGATCAGGAATGGTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCGGAAAACGCGCTTTACAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATA                                                                                       <  7:103535/149‑1                                                                                                                                 CTGAAAACGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAG     <  1:65842/148‑1                                                                                                                                  TGAAAACGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGC    >  1:166231/1‑148                                                                                                                                  TGAAAACGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGC    >  3:40160/1‑148                                                                                                                                    AAAACGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATGATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGCCA  <  4:122734/148‑1                                                                                                                                                                                                                                                                                         TTTAGAACGGGTCTTGCCGACGCCATAAATCGAAGTTAATGCGATTACGGCATGCTTATGATCAGGAATGTTAATGCCTGCTATACGGGCCACTATGCACTCCTACTATTTAATATGTACGTTCCATGCTGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3442379‑3442513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaaaaCGGGCTTTTCAGCATGGAACGTACATATTAAATAGTAGGAGTGCATAGTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGCCA  <  NC_000913/3442518‑3442375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.