BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	1437935 =	142 (0.650)	3 (0.010)	3/248	9.8	2.2%	coding (738/1821 nt)	kinA	sporulation kinase KinA
*	?	NZ_CP034943	= 1437931	132 (0.650)	3 (0.010)	3/248	9.8	2.2%	coding (734/1821 nt)	kinA	sporulation kinase KinA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 145 total aligned reads displayed.

TGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTATGAAT  >  NZ_CP034943/1437796‑1438073

tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                            >  1:101563/1‑140 (MQ=255)

tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                            >  1:2352820/1‑140 (MQ=255)

tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                            >  1:307335/1‑140 (MQ=255)

tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                            >  1:913276/1‑140 (MQ=255)

tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                            >  2:2952663/1‑140 (MQ=255)

    aaaCAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctgctgc                                                                                                                                        <  2:2683580/140‑1 (MQ=255)

          gATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGa                                                                                                                                  >  1:2976458/1‑140 (MQ=255)

            ttATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATc                                                                                                                                <  1:1573288/140‑1 (MQ=255)

               taCGAATGCAAAAAGGAATGGAAGTTGGACTGATTGAAAAGACGTGGACAGGGCGTGATGGCACACCTGGTCATTTAGAAGTGAAAGCGTCCCCGACCGGCTACCAAACCCAGCAGGCTGAGCTCCTGCTGATGATCGat                                                                                                                             >  2:2625371/1‑140 (MQ=255)

               taCGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGat                                                                                                                             <  2:1717155/140‑1 (MQ=255)

               taCGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCGGAGCTGCTGCTGCTGATCGat                                                                                                                             >  2:3392955/1‑140 (MQ=255)

                 cGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGatat                                                                                                                           <  2:101563/140‑1 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATc                                                                                                                                <  2:1803969/132‑1 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATc                                                                                                                                >  1:1803969/1‑132 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGatat                                                                                                                           <  2:2681005/137‑1 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGatat                                                                                                                           >  1:2681005/1‑137 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                        >  2:362419/1‑140 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                        >  2:3339102/1‑140 (MQ=255)

                    aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                        >  1:1362950/1‑140 (MQ=255)

                               aaTGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGaaaa                                                                                                             <  1:830636/140‑1 (MQ=255)

                               aaTGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGaaaa                                                                                                             <  1:2520394/140‑1 (MQ=255)

                               aaTGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGaaaa                                                                                                             >  1:3159381/1‑140 (MQ=255)

                                         ggAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAc                                                                                                   >  1:344483/1‑140 (MQ=255)

                                         ggAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAc                                                                                                   >  1:2864011/1‑140 (MQ=255)

                                              gATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATcc                                                                                              <  1:1543503/140‑1 (MQ=255)

                                               aTTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCt                                                                                             >  1:2655400/1‑140 (MQ=255)

                                               aTTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGGCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCt                                                                                             >  2:1436546/1‑140 (MQ=255)

                                                     cAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCaaaa                                                                                       <  2:2649110/140‑1 (MQ=255)

                                                        aCGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAg                                                                                    >  2:885513/1‑140 (MQ=255)

                                                             gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                               <  1:2145955/140‑1 (MQ=255)

                                                             gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                               <  2:385923/140‑1 (MQ=255)

                                                             gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                               <  2:2142253/140‑1 (MQ=255)

                                                              aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                              <  1:2271110/140‑1 (MQ=255)

                                                              aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                              <  1:3052893/140‑1 (MQ=255)

                                                              aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                              <  2:1471011/140‑1 (MQ=255)

                                                                 aGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACg                                                                           <  2:3206903/140‑1 (MQ=255)

                                                                 aGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACg                                                                           <  2:763902/140‑1 (MQ=255)

                                                                  ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGa                                                                          >  2:1263998/1‑140 (MQ=255)

                                                                  ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGa                                                                          >  2:2311270/1‑140 (MQ=255)

                                                                            cacaCCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCCGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATCTCAgctgc                                                                >  2:2972807/1‑140 (MQ=255)

                                                                             acacCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAgctgct                                                               >  1:2017254/1‑140 (MQ=255)

                                                                                   gTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCa                                                         >  1:1269924/1‑140 (MQ=255)

                                                                                   gTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCa                                                         >  2:1028333/1‑140 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAcc                                                                                                  >  2:909951/1‑98 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAcc                                                                                                  <  1:909951/98‑1 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaa                                                        >  2:1593348/1‑140 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaa                                                        >  2:2176370/1‑140 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaa                                                        >  1:2850062/1‑140 (MQ=255)

                                                                                    ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaa                                                        >  2:436783/1‑140 (MQ=255)

                                                                                     tCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGA‑‑‑GCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAAtt                                                    <  2:1220277/140‑1 (MQ=255)

                                                                                      cATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaaaa                                                      >  2:3315743/1‑140 (MQ=255)

                                                                                        tttAGCAGTGAAAGCGGCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCACTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAAtt                                                    <  2:2883810/140‑1 (MQ=255)

                                                                                        tttAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCATGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAAtt                                                    <  2:2883689/140‑1 (MQ=255)

                                                                                         ttAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTc                                                   >  2:85752/1‑140 (MQ=255)

                                                                                         ttAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCCTGAACGATATCAGCTGCTGATTCAAAATTc                                                   >  2:3078264/1‑140 (MQ=255)

                                                                                          tAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCa                                                  <  2:3245504/140‑1 (MQ=255)

                                                                                           aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATCTCAGCTGCTGATTCAAAATTCaa                                                 >  1:1918284/1‑140 (MQ=255)

                                                                                           aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCaa                                                 >  2:2566535/1‑140 (MQ=255)

                                                                                           aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCaa                                                 >  2:2498581/1‑140 (MQ=255)

                                                                                           aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCaa                                                 >  1:1431089/1‑140 (MQ=255)

                                                                                            gAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAAt                                                <  1:811297/140‑1 (MQ=255)

                                                                                            gAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTACAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAAt                                                <  2:344483/140‑1 (MQ=255)

                                                                                             aaGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATc                                               >  1:2158413/1‑140 (MQ=255)

                                                                                               gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                             <  2:1694591/140‑1 (MQ=255)

                                                                                               gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                             <  1:2766748/140‑1 (MQ=255)

                                                                                               gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGAGATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                             <  2:171572/140‑1 (MQ=255)

                                                                                                  aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                             <  2:1111627/137‑1 (MQ=255)

                                                                                                  aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                             >  1:1111627/1‑137 (MQ=255)

                                                                                                  aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATAc                                          >  1:1399882/1‑140 (MQ=255)

                                                                                                     gCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCAt                                       <  1:3172893/140‑1 (MQ=255)

                                                                                                         ccccGACCGTCTACAAAAACCAGCAGGGTGAGGTGCTGCGGCTGATCGATATCTCTTCAAGGAAAAAATTCCAACCCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                   <  2:3013911/140‑1 (MQ=255)

                                                                                                         ccccGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                   <  1:362419/140‑1 (MQ=255)

                                                                                                         ccccGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGAGATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                   <  1:1075666/140‑1 (MQ=255)

                                                                                                            cGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                                >  1:2994311/1‑140 (MQ=255)

                                                                                                              aCCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGAt                              <  2:2002343/140‑1 (MQ=255)

                                                                                                                 gTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCa                           >  2:396494/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                                <  1:1321019/134‑1 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                                >  2:1321019/1‑134 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:1576001/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:1636765/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  2:1521413/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  2:1315949/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  2:1184108/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:574126/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:2619818/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:409145/1‑140 (MQ=255)

                                                                                                                  tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                          >  1:2846995/1‑140 (MQ=255)

                                                                                                                    tACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATaa                        <  2:2017254/140‑1 (MQ=255)

                                                                                                                    tACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATaa                        <  1:1657490/140‑1 (MQ=255)

                                                                                                                      cAAAACCCCGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAACAATTCCAAACCATCCTGCAAAAACGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGTGGTGATTCATAATg                      <  2:2091886/140‑1 (MQ=255)

                                                                                                                      cAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATg                      <  2:1348371/140‑1 (MQ=255)

                                                                                                                         aaaCCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGaa                   >  2:2987440/1‑140 (MQ=255)

                                                                                                                            ccAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                              <  1:1247264/78‑1 (MQ=255)

                                                                                                                              accagGCTGAGCTGCTGCTGCTGATCGAGCTCTCGTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTAATAATGGAAAATgg              <  2:1756727/138‑1 (MQ=255)

                                                                                                                                cagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGgt            <  1:436783/140‑1 (MQ=255)

                                                                                                                                cagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGgt            >  1:2536795/1‑140 (MQ=255)

                                                                                                                                cagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCCGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGgt            <  2:1995981/140‑1 (MQ=255)

                                                                                                                                         ctgctgctgctgATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTatgaa   <  2:607532/140‑1 (MQ=255)

                                                                                                                                          tgctgctgctgATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTatgaat  <  1:2311270/140‑1 (MQ=255)

                                                                                                                                          agctgctgctgAACGAGAGCTCTTCCCCGAAAAAATTCCACACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATACTGGAAAATGGGTGTTTatgaat  <  1:2115057/139‑1 (MQ=255)

TGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTATGAAT  >  NZ_CP034943/1437796‑1438073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.