New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 1437935 =142 (0.650)3 (0.010) 3/248 9.8 2.2% coding (738/1821 nt) kinA sporulation kinase KinA
?NZ_CP034943 = 1437931 132 (0.650)coding (734/1821 nt) kinA sporulation kinase KinA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 147 total aligned reads displayed.

ATCGTGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTATG  >  NZ_CP034943/1437792‑1438070
                                                                                                                                           |                                                                                                                                           
atCGTGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGa                                                                                                                                             <  1:465829/140‑1 (MQ=255)
  cGTGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgc                                                                                                                                           >  1:1995981/1‑140 (MQ=255)
  cGTGAAAAACAGGAGTATACGAATGCACAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGTTGGCACACCTGTTCATGTAGAAGTGTATGCGTCCCCGACCGTCTACAAAATCCAGCAGGCTGAgc                                                                                                                                           >  1:3373675/1‑140 (MQ=255)
    tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                         >  1:101563/1‑140 (MQ=255)
    tGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctg                                                                                                                                         >  1:2670087/1‑140 (MQ=255)
     gAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctgc                                                                                                                                        <  2:426228/140‑1 (MQ=255)
        aaaCAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAgctgctgc                                                                                                                                     <  2:2683580/140‑1 (MQ=255)
                ttATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATc                                                                                                                             <  1:1573288/140‑1 (MQ=255)
                   taCGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGat                                                                                                                          <  2:1717155/140‑1 (MQ=255)
                     cGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGatat                                                                                                                        <  2:101563/140‑1 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATc                                                                                                                             <  2:1803969/132‑1 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGatat                                                                                                                        >  1:2681005/1‑137 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                     >  1:3245504/1‑140 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                     >  1:1362950/1‑140 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                     >  2:3339102/1‑140 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                     >  2:362419/1‑140 (MQ=255)
                        aTGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATAtctc                                                                                                                     >  1:2142253/1‑140 (MQ=255)
                                   aaTGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGaaaa                                                                                                          >  1:3159381/1‑140 (MQ=255)
                                   aaTGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGaaaa                                                                                                          <  1:2520394/140‑1 (MQ=255)
                                          gTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCGACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCa                                                                                                   >  2:1501249/1‑140 (MQ=255)
                                             ggAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAc                                                                                                >  1:2864011/1‑140 (MQ=255)
                                             ggAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAc                                                                                                >  1:367245/1‑140 (MQ=255)
                                                  gATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATcc                                                                                           <  1:1543503/140‑1 (MQ=255)
                                                  gATTGAACAGACGTGGAAAACTCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCCGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATcc                                                                                           <  1:2572591/140‑1 (MQ=255)
                                                   aTTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGGCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCt                                                                                          >  2:1436546/1‑140 (MQ=255)
                                                         cAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCaaaa                                                                                    <  2:2649110/140‑1 (MQ=255)
                                                            aCGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAg                                                                                 >  1:2445962/1‑140 (MQ=255)
                                                            aCGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAg                                                                                 >  2:885513/1‑140 (MQ=255)
                                                               tGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCg                                                                              <  1:945574/140‑1 (MQ=255)
                                                                 gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                            <  1:2145955/140‑1 (MQ=255)
                                                                 gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                            <  2:2142253/140‑1 (MQ=255)
                                                                 gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                            >  1:1694591/1‑140 (MQ=255)
                                                                 gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                            <  2:385923/140‑1 (MQ=255)
                                                                 gAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTg                                                                            <  2:2670087/140‑1 (MQ=255)
                                                                  aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           <  1:2271110/140‑1 (MQ=255)
                                                                  aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           <  1:3052893/140‑1 (MQ=255)
                                                                  aaaaGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           <  1:160847/140‑1 (MQ=255)
                                                                     aGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACg                                                                        <  2:763902/140‑1 (MQ=255)
                                                                      ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCACACCATCCTGCAAAAAAGCCGTGAACGa                                                                       >  2:2115057/1‑140 (MQ=255)
                                                                      ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGa                                                                       >  2:3261650/1‑140 (MQ=255)
                                                                      ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGa                                                                       >  2:1263998/1‑140 (MQ=255)
                                                                      ggCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGa                                                                       >  2:2311270/1‑140 (MQ=255)
                                                                        cTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGata                                                                     >  1:3025090/1‑140 (MQ=255)
                                                                          tGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATc                                                                   >  2:1657490/1‑140 (MQ=255)
                                                                                cacaCCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCCGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATCTCAgctgc                                                             >  2:2972807/1‑140 (MQ=255)
                                                                                 acacCTGTTCAGTTAGAAGTGAAAGCGTCCCCGACCGTCTAAAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGGGAACGATATCAgctgct                                                            >  1:2237303/1‑140 (MQ=255)
                                                                                       gTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCa                                                      <  2:2352820/140‑1 (MQ=255)
                                                                                       gTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCa                                                      >  1:1269924/1‑140 (MQ=255)
                                                                                        ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAcc                                                                                               >  2:909951/1‑98 (MQ=255)
                                                                                        ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAAcc                                                                                               <  1:909951/98‑1 (MQ=255)
                                                                                        ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCaa                                                     >  2:436783/1‑140 (MQ=255)
                                                                                        ttCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAACCCGTGAACGATATCAGCTGCTGATTCaa                                                     >  2:1735866/1‑140 (MQ=255)
                                                                                            tttAGCAGTGAAAGCGGCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCACTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAAtt                                                 <  2:2883810/140‑1 (MQ=255)
                                                                                             ttAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTc                                                >  2:85752/1‑140 (MQ=255)
                                                                                             ttAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCCTGAACGATATCAGCTGCTGATTCAAAATTc                                                >  2:3078264/1‑140 (MQ=255)
                                                                                              tAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCa                                               <  2:3245504/140‑1 (MQ=255)
                                                                                               aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATCTCAGCTGCTGATTCAAAATTCaa                                              >  1:1918284/1‑140 (MQ=255)
                                                                                               aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCaa                                              >  2:2566535/1‑140 (MQ=255)
                                                                                               aGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCaa                                              >  1:1431089/1‑140 (MQ=255)
                                                                                                gAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAAt                                             <  1:811297/140‑1 (MQ=255)
                                                                                                gAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGAAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAAt                                             <  2:1318991/140‑1 (MQ=255)
                                                                                                gAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTACAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAAt                                             <  2:344483/140‑1 (MQ=255)
                                                                                                   gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                          <  2:1694591/140‑1 (MQ=255)
                                                                                                   gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                          <  1:3106959/140‑1 (MQ=255)
                                                                                                   gTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                          <  1:788147/140‑1 (MQ=255)
                                                                                                      aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                          <  2:1111627/137‑1 (MQ=255)
                                                                                                      aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGa                                          >  1:1111627/1‑137 (MQ=255)
                                                                                                      aaaGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATAc                                       >  1:1399882/1‑140 (MQ=255)
                                                                                                      aaaGCCTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAACAAAGCCGTGAACGAAAACCGCTGCTGCTTCAAAATTCAAACGATAc                                       >  2:1909776/1‑140 (MQ=255)
                                                                                                         gCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCAt                                    <  1:893929/140‑1 (MQ=255)
                                                                                                             ccccGACCGTCTACAAAAACCAGCAGGGTGAGGTGCTGCGGCTGATCGATATCTCTTCAAGGAAAAAATTCCAACCCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                <  2:3013911/140‑1 (MQ=255)
                                                                                                             ccccGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                <  1:362419/140‑1 (MQ=255)
                                                                                                             ccccGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGAGATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCg                                <  1:1075666/140‑1 (MQ=255)
                                                                                                                cGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                             >  1:2994311/1‑140 (MQ=255)
                                                                                                                  aCCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGAt                           <  2:2002343/140‑1 (MQ=255)
                                                                                                                     gTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCa                        >  2:396494/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGaa                                                                          <  2:2008357/89‑1 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGaa                                                                          >  1:2008357/1‑89 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           >  1:290558/1‑88 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           <  2:290558/88‑1 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                             <  1:1321019/134‑1 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTg                             >  2:1321019/1‑134 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  2:1184108/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  2:1521413/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  1:1636765/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  2:1111626/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  1:2846995/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCAt                       >  1:2619818/1‑140 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTCCTCATTCAAAATTCACTCGATACCATTGCGgtcagtcag                       >  2:2590946/1‑139 (MQ=255)
                                                                                                                      tCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAACGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATAGCGGTGATTCAt                       >  2:2813798/1‑140 (MQ=255)
                                                                                                                        tACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATaa                     <  1:1657490/140‑1 (MQ=255)
                                                                                                                        tACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATaa                     <  2:2017254/140‑1 (MQ=255)
                                                                                                                           aaaaaCCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATgg                  <  1:2810010/140‑1 (MQ=255)
                                                                                                                             aaaCCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGaa                >  2:2987440/1‑140 (MQ=255)
                                                                                                                                ccAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           >  2:1247264/1‑78 (MQ=255)
                                                                                                                                ccAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGa                                                                           <  1:1247264/78‑1 (MQ=255)
                                                                                                                                  agcagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATgg           <  2:3384976/140‑1 (MQ=255)
                                                                                                                                  agcagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATgg           <  2:3131600/140‑1 (MQ=255)
                                                                                                                                  agcagGCTGAGCTGCTGCAGCTGATCGATATCTCTTCAACGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATgg           <  2:1369520/140‑1 (MQ=255)
                                                                                                                                    cagGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGgt         <  1:436783/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
ATCGTGAAAAACAGGATTATACGAATGCAAAAAGGAATGGAAGTTGGAATGATTGAACAGACGTGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCGTCCCCGACCGTCTACAAAAACCAGCAGGCTGAGCTGCTGCTGCTGATCGATATCTCTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATATCAGCTGCTGATTCAAAATTCAATCGATACCATTGCGGTGATTCATAATGGAAAATGGGTGTTTATG  >  NZ_CP034943/1437792‑1438070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.