| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 2940996 | 384 (0.850) | 3 (0.010) | 3/248 | NT | 0.78% | coding (83/441 nt) | EO946_RS15155 | FixH family protein |
| ? | NZ_CP034943 | 2941000 = | 384 (0.860) | coding (79/441 nt) | EO946_RS15155 | FixH family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2940857‑2940996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA > NZ_CP034943/2941000‑2941138 ccCTTCAAACTCCCCTACCTCGGCAGCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGCCGCTTTCTCCGGGGGTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:1631414/138‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCATGGGGAGTCAGCTTTATATAAAATACGTCAGGCGTCTCAGCTG < 2:4058674/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:2367057/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:3176728/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:7046044/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:7414477/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 2:6921004/140‑1CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCGTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG < 1:2509307/140‑1 TTCAGGCCCGGTCAGCTTGACATCCAAAACCTCGGGCGTCTCAGCTGTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTC > 2:3581/1‑140 ggcccgGTCAGCTTGACATCCAAAACCTCGGGCGTCTCAGCTGTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCG < 1:1775979/134‑1 gGTCAGCTTGACATCCAAAACCTCGGGCGTCTCAGCTGTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAC < 2:3235410/139‑1 CTGTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACA < 1:3581/140‑1 CTGTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACACCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACA < 1:3422/140‑1 GTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA < 1:502908/140‑1 GTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA < 1:5653800/140‑1 GTATTTGCTGTGTGTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCCTCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA < 1:5831700/140‑1 CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2940857‑2940996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA > NZ_CP034943/2941000‑2941138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |