New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 2940996384 (0.850)3 (0.010) 3/248 NT 0.78% coding (83/441 nt) EO946_RS15155 FixH family protein
?NZ_CP034943 2941000 = 384 (0.860)coding (79/441 nt) EO946_RS15155 FixH family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 407 total aligned reads displayed.

TCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA  >  NZ_CP034943/2940861‑2941138
                                                                                                                                           |                                                                                                                                          
   aaCTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTAtt                                                                                                                                         <  1:6599632/140‑1 (MQ=255)
       ccccTTCCTCGGCATCCGTCACCGCGTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                     <  2:7702502/137‑1 (MQ=255)
       ccACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                     <  1:7592769/140‑1 (MQ=255)
       ccACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                     <  2:2703908/140‑1 (MQ=255)
       ccACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                     <  1:1778738/140‑1 (MQ=255)
         aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCCGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                   >  1:3889107/1‑140 (MQ=255)
         aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                   >  1:840073/1‑140 (MQ=255)
         aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                   >  1:1080237/1‑140 (MQ=255)
         aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                   >  1:6128862/1‑140 (MQ=255)
         aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTGCTCCGGGGTTTACTTTGTCAGGGCCAGTCAGCTTGACATCCACTACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                   >  1:5560130/1‑140 (MQ=255)
         aCTTCATCCGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATTCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCACCTTTACATACAATACATAAGGCGTCTCACATGCAGTATATGCttt                                                                                                                                   >  2:4395940/1‑140 (MQ=255)
            tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  2:2872347/140‑1 (MQ=255)
            tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  1:3284310/140‑1 (MQ=255)
            tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  1:1750933/140‑1 (MQ=255)
            tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  1:2098293/140‑1 (MQ=255)
            tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAAGACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  1:627090/140‑1 (MQ=255)
            tCATCGGAATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCATTCAGCTTGAAATCCAATAACTCAGGCGTATCAGCTGCAGTATTTGCTTTGtt                                                                                                                                <  2:4514596/140‑1 (MQ=255)
                     tCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGa                                                                                                                       >  1:6726941/1‑140 (MQ=255)
                       cGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTGCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACCTCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAAc                                                                                                                     >  2:4847863/1‑140 (MQ=255)
                          cACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGc                                                                                                                  <  2:4723552/140‑1 (MQ=255)
                             cGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATc                                                                                                               >  2:1617827/1‑140 (MQ=255)
                                          tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaa                                                                                                  >  2:619178/1‑140 (MQ=255)
                                          tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaa                                                                                                  >  2:2280820/1‑140 (MQ=255)
                                          tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATGTGGTTTGTTGTGACCAGAACCGCATCCATTCAGCacaca                                                                                                  >  2:5562610/1‑136 (MQ=255)
                                                aCCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcaga                                                                                            >  1:2341784/1‑140 (MQ=255)
                                                  cGCTGCTTCATATGCGACTCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaa                                                                                          >  1:3758755/1‑140 (MQ=255)
                                                  cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGa                                                                                                                       <  1:7367098/111‑1 (MQ=255)
                                                  cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaacaagcagaaa                                                                                          >  1:6413455/1‑140 (MQ=255)
                                                  cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaa                                                                                          >  2:7487684/1‑140 (MQ=255)
                                                  cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaa                                                                                          >  1:6172479/1‑140 (MQ=255)
                                                  cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTGTTTCAGGGCCAGTCAGATTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCATAACCGCATCCATTAAGCaaaaaagcacaaa                                                                                          >  2:1336029/1‑140 (MQ=255)
                                                    ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCCTCCATTAAGCaaaaaagcagaaaaa                                                                                        >  1:1218713/1‑140 (MQ=255)
                                                      gctTCATATGCGACGCTGTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagacaaaag                                                                                      >  1:5216924/1‑140 (MQ=255)
                                                         tCATATGCGACGCTTTCTCCGGGGTTTACTTTTGCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCCGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaaagccg                                                                                   >  2:5498938/1‑138 (MQ=255)
                                                            tatGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGaac                                                                                >  2:6739433/1‑140 (MQ=255)
                                                            tatGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGaac                                                                                <  1:1524205/140‑1 (MQ=255)
                                                                cGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCATCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacc                                                                            <  2:7129838/140‑1 (MQ=255)
                                                                cGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacc                                                                            <  1:2691313/140‑1 (MQ=255)
                                                                 gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                           >  1:5686468/1‑140 (MQ=255)
                                                                 gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                           >  1:7145304/1‑140 (MQ=255)
                                                                     cTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACAt                                                                       >  2:1280019/1‑140 (MQ=255)
                                                                        tctcCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCtt                                                                    >  1:4732822/1‑140 (MQ=255)
                                                                        tctcCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCtt                                                                    >  1:4205989/1‑140 (MQ=255)
                                                                           ccGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCttttt                                                                 <  1:1316435/140‑1 (MQ=255)
                                                                            cGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTc                                                                <  2:4001763/140‑1 (MQ=255)
                                                                             ggggTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCa                                                               <  2:4951093/140‑1 (MQ=255)
                                                                             ggggTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCACGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCa                                                               <  2:884656/140‑1 (MQ=255)
                                                                              gggTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCAt                                                              <  1:3598200/140‑1 (MQ=255)
                                                                                   tACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCAt                                                         <  2:2941963/140‑1 (MQ=255)
                                                                                   tACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCAt                                                         <  1:5298086/140‑1 (MQ=255)
                                                                                     cTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCa                                                       <  2:5005247/140‑1 (MQ=255)
                                                                                     atttttCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCa                                                       <  2:3263181/139‑1 (MQ=255)
                                                                                        tttCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCAccc                                                    >  1:962162/1‑140 (MQ=255)
                                                                                                  aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          <  2:1865917/140‑1 (MQ=255)
                                                                                                  aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          <  2:7258852/140‑1 (MQ=255)
                                                                                                  aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTGTCATCGtt                                          <  2:3092209/140‑1 (MQ=255)
                                                                                                  aGTCAGCTTGACATCCAATACCTCAGGCGTATCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          <  1:6964523/140‑1 (MQ=255)
                                                                                                  aGTCAGCTTGACATCCAATACCTCACGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          <  1:4454579/140‑1 (MQ=255)
                                                                                                     cAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACAGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                       <  1:7719275/140‑1 (MQ=255)
                                                                                                       gCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCt                                     <  2:5686468/140‑1 (MQ=255)
                                                                                                           gACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                       <  2:2110832/134‑1 (MQ=255)
                                                                                                           gACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAAt                                 <  1:4870566/140‑1 (MQ=255)
                                                                                                              aTCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCg                                            <  2:6881880/126‑1 (MQ=255)
                                                                                                              aTCCAATACCTCAGGCGACTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGGATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCAATCACACTTTCATCGTTTAACTAAAtagt                              >  2:2432194/1‑140 (MQ=255)
                                                                                                                ccAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAAtagtag                            >  2:589550/1‑140 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCATCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  2:1059071/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          >  1:1664363/1‑124 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  1:3060251/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  2:1528360/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  2:5294756/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  1:4645960/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  1:2892530/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  1:5153046/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  1:7510097/140‑1 (MQ=255)
                                                                                                                  aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          <  2:3500878/140‑1 (MQ=255)
                                                                                                                   aTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCaa                         <  2:371397/140‑1 (MQ=255)
                                                                                                                         cAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCtt                   >  2:6338856/1‑140 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCttt                                                 >  2:4294623/1‑109 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCttt                                                 >  2:6602339/1‑109 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCttt                                                 <  1:4294623/109‑1 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                       >  1:2520725/1‑119 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                       <  2:2520725/119‑1 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                       <  2:3367919/119‑1 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTa                  >  2:2659114/1‑140 (MQ=255)
                                                                                                                          aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGAAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTa                  >  2:1167086/1‑140 (MQ=255)
                                                                                                                           ggCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTAc                 >  2:6130598/1‑140 (MQ=255)
                                                                                                                              gTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGc              <  2:1718786/140‑1 (MQ=255)
                                                                                                                                ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                          >  2:833633/1‑126 (MQ=255)
                                                                                                                                ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaa            >  2:145432/1‑140 (MQ=255)
                                                                                                                                ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaa            >  2:6379203/1‑140 (MQ=255)
                                                                                                                                 tcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGt                                           >  1:1863576/1‑108 (MQ=255)
                                                                                                                                 tcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaaa           >  1:719801/1‑140 (MQ=255)
                                                                                                                                 tcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaaa           >  1:5954060/1‑140 (MQ=255)
                                                                                                                                   aGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATg         <  2:4179043/140‑1 (MQ=255)
                                                                                                                                        ctgTATTTGCTTTACTTTCACCAGATCCGCATCCATTAAGCAATAAAGCAGAAAAAAGCAGAACAACCAACACCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACa    <  1:3422‑M2/137‑1 (MQ=255)
                                                                                                                                        cAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                          <  1:6826388/102‑1 (MQ=255)
                                                                                                                                        cAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACa    >  2:4630035/1‑140 (MQ=255)
                                                                                                                                        cAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACa    >  2:7064740/1‑140 (MQ=255)
                                                                                                                                          gTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATa  <  1:502908‑M2/139‑1 (MQ=255)
                                                                                                                                          gTATTTGCTGTGTGTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCCTCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATa  <  1:5831700‑M2/139‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
TCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTACATA  >  NZ_CP034943/2940861‑2941138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.