| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 2411159 = | 256 (1.050) | 4 (0.020) | 4/232 | NT | 1.7% | coding (635/924 nt) | spoIIIAA | stage III sporulation protein AA |
| ? | NZ_CP034943 | = 2411155 | 241 (1.080) | coding (639/924 nt) | spoIIIAA | stage III sporulation protein AA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2411307‑2411159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgatTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG < NZ_CP034943/2411155‑2411017 GGCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCT > 1:865653/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACCGAGGATTGACGTATTATACGCCTGTCCAAAGGCTGAGGGGCTG > 2:2915031/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:100369/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 2:1252237/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 2:1252149/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 2:1174653/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 2:1523324/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:3771353/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:3516137/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:2717808/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:2492899/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 2:3151911/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTAAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGACGGGCTG > 1:1999536/1‑140 GCAAAAACCACATATTGCCCGTAAAGACAGGAAGCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTG > 1:657041/1‑140 AACCACATCTGGCCCTTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGAT < 2:3123922/140‑1 AACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGAT < 2:3123901/140‑1 ACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATG < 2:3825986/140‑1 CCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGATTCGATCCAT < 1:3328101/140‑1 CCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGATTCGATCCAT > 1:711157/1‑140 CCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTG < 2:711157/140‑1 AGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATCCAGAGGCACTTCTTGAGGCGCTGCATGCAGGGGT > 2:3860665/1‑140 TGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGAC < 1:2151033/140‑1 TGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGAC < 1:1975857/140‑1 TGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGAC < 2:70425/140‑1 TGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGAC < 1:2060442/140‑1 TGATGATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGAC < 2:3412734/140‑1 GATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGA > 1:3572532/1‑140 GATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGA > 1:3637770/1‑140 ATGATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGAT > 2:3613161/1‑140 ATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGGACTTCTTGAGGCTCTTCATGCAGGTGTTTCAGTTATCGTATCGGCGCATTTATTGAGCATATCCGACCTGATGAt < 2:2522351/140‑2 ATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCAGTTCTTGTTGCGCTGCATGCAGGTTTTTCAGTTATCGTCTAGGCTCATTTATTTAGCATATCCGACCTGATGAt < 2:1120658/140‑2 ATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTTCATGCAGGTGTTTCAGTTATCGTCTCGGCTAATTTATGGAGCATATCCGACCTGATGAt < 2:304654/140‑2 ATTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAA < 2:3857177/140‑1 TTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG > 1:2565708/1‑140 TTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG > 2:3139106/1‑140 TTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG > 2:443819/1‑140 TTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG > 2:1738418/1‑140 GGCAAAAACCACATATTGCCCGTAAAGACAGGAATCGTCGACGAACGGTCAGAAATTGCCGGATGCCTGCGCGGCATTCCGCAGCATCAATTTGGACAGAGGATTGACGTATTAGACGCCTGTCCAAAGGCTGAGGGGCTGATGATGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2411307‑2411159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgatTCGATCCATGAGCCCTGAGGTGATCATTGTCGATGAAATCGGGCGTGTGGAAGATACAGATGCACTTCTTGAGGCGCTGCATGCAGGTGTTTCAGTTATCGTCTCGGCGCATGGCTGGAGCATATCCGACCTGATGAAG < NZ_CP034943/2411155‑2411017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |