New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2902695 =	54 (1.000)	4 (0.080)	4/280	7.4	6.8%	coding (331/1638 nt)	pyrG	CTP synthetase
	?	CP009273	2902717 =	57 (1.100)					coding (309/1638 nt)	pyrG	CTP synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2902846‑2902695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGT  >  CP009273/2902717‑2902856                                                                                                                                                                                                                                                                                                      GTTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTATGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCG                                                                                                                                                 >  1:461514/1‑149  TTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTCCCTCGG                                                                                                                                                >  1:125891/1‑149  TTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGG                                                                                                                                                >  1:371130/1‑149  TTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGGAGCTGCGCAGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGG                                                                                                                                                >  1:753511/1‑149   TCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGC                                                                                                                                               <  1:637411/149‑1     GTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGGGACTACCCCGGCcc                                                                                                                                             >  1:224099/1‑147      TTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTTCCTGGGCaca                                                                                                                                            >  1:17242/1‑146      TTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGGGGCTACCTCGGCGTa                                                                                                                                            >  1:232272/1‑148        acggcAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGG                                                                                                                                                <  2:280320/138‑1          TGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGATCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCG                                                                                                                                              >  2:597590/1‑143                                                                               CCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAA                                                                   >  1:84789/1‑149                                                                                                             CTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGT                                     >  1:783541/1‑149                                                                                                                                             ACTCCCTCGGCGTTCTTTACGCAGGACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACA           <  2:716312/143‑1                                                                                                                                                    gGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGTTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACCCTTCCCC    <  2:454849/142‑1                                                                                                                                                      GCGTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGT  <  2:731279/143‑1                                                                                                                                                                                                                                                                                                      GTTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2902846‑2902695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTTCTTTACGCAGAACGTCAGAGTAGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGT  >  CP009273/2902717‑2902856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.