| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 19796 = | NA (NA) | 160 (0.980) | 110/296 | 0.1 | 93.6% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | CP009273 | 3649844 = | 11 (0.070) | coding (257/333 nt) | hdeA | stress response protein acid‑resistance protein | |||||
Only 100 of 324 total aligned reads displayed.
ATAGCTGCTTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCA > CP009273/3649696‑3649992 | aattgagcggcataacccgaatctgaggcagcaccgggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcggcatgacaaagtcatcgggcattatcggaacatacaacactctcaataagttggcgccattaccg > 1:1657911‑M2/149‑149 (MQ=255) attgagcggcatcacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGc < 1:640091‑M2/2‑1 (MQ=255) gctgctTTTAAAGAAGATATTCCGGCCAGTTGCTTGTGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCt > 2:1304510/1‑149 (MQ=255) ctgctTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTg > 1:222897/1‑149 (MQ=255) tgctTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCACCTTTAACTTTATCTGTAAAGTTGGCTTGTTTATCCTGAGTACAAACCTGa > 2:1921929/1‑149 (MQ=255) cggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctccaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGCAc > 2:2223686‑M2/142‑149 (MQ=255) ttttAAAGAAGATATTTCGTCCTGTTCAATATGCAAGTAATTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGTCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACg < 1:44600/149‑1 (MQ=255) tttAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGg < 1:1541809‑M2/149‑2 (MQ=255) ataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacacagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATa < 2:2559547‑M2/12‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgtgcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTgg < 2:1728385‑M2/17‑1 (MQ=255) gaTACTCCCGCCTGCTCAATATGCAAGTAAGCACGATGTAACGCATTCCCGGAATGAAATATCTTTCTTAAGTTGGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTACCCTGAGTACAAGCCTGAACGggtgatgctg > 2:408828‑M2/1‑139 (MQ=255) tgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACg < 1:131052‑M2/24‑1 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACgg > 2:337010‑M2/125‑149 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacacaaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACgg < 1:2110583‑M2/25‑1 (MQ=255) ggCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGACCGggtgatgctgccaactta < 2:922039‑M2/149‑19 (MQ=255) ggCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaactta > 2:1543625‑M2/1‑131 (MQ=255) gcagcccctggcagggtctggacggaaggcgctgtcgttcccaaattcgggggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTg < 2:10999‑M2/28‑1 (MQ=255) gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTg > 1:2164956‑M2/122‑149 (MQ=255) ttCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtggtgctgccacctaactgagt < 1:1510005‑M2/149‑25 (MQ=255) cctggcacggcggggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATAc < 2:2066763‑M2/34‑1 (MQ=255) cAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgattta > 1:728802‑M2/1‑123 (MQ=255) gCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacctaccgctttagcgtac < 1:2088979‑M2/149‑33 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACAt < 2:902824‑M2/43‑1 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactagcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACAt < 2:2229247‑M2/43‑1 (MQ=255) aaGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatga < 2:2158093‑M2/149‑35 (MQ=255) aGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgat < 2:2296831‑M2/149‑36 (MQ=255) aaGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggt > 1:665548‑M2/1‑111 (MQ=255) tACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCGTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttcgtgtatgatggtgtt < 2:459242‑M2/149‑42 (MQ=255) tACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:1919455‑M2/1‑108 (MQ=255) aCGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgttt < 2:2367080‑M2/149‑43 (MQ=255) aTGTAACGGCTGCCCGGAATTACCTATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATTTTTAAAGTTGGCTTGTTTCTCCTGAGTTCAAGCCTGAACGggttatgctgccaacttactgatttagtgtatgatggtgtttttg > 1:815017‑M2/1‑104 (MQ=255) tGTAACGCACTCCCGGAATTACATAGCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTACCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 2:1329210‑M2/1‑103 (MQ=255) gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacacgagcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTGCGGTTGCAATACCCTAAACATCTAAAACCGCAt > 1:1274696‑M2/95‑149 (MQ=255) gTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:2650591‑M2/1‑102 (MQ=255) tAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgagg < 2:194131‑M2/149‑49 (MQ=255) aaCGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCCTGCGCCTTTAACTTTATCTTTAAAGTTGGCTGGTTTATCCTGAGTACAACCCTGAACGggtgatgctgtcgacttactgcgttagtgtatgctggggcttttgagct < 1:1152668‑M2/149‑50 (MQ=255) tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCCATACTCTGAACATCTAAAACCGCAtcttct < 2:1375900‑M2/60‑1 (MQ=255) cATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 2:218982‑M2/1‑96 (MQ=255) cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGt < 2:2125587‑M2/63‑1 (MQ=255) cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGt < 1:149190‑M2/63‑1 (MQ=255) aTTCCCGGAATTACATGTCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttaaggtatgatggggcgtttgaggtgcccc < 1:2045507‑M2/149‑55 (MQ=255) aTTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTGACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc > 1:302999‑M2/1‑95 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGGACATCTAAAACCGCATCTTCTGGTTTatg > 2:964785‑M2/82‑148 (MQ=255) ggAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTCATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc > 1:1384177‑M2/1‑89 (MQ=255) caaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCt > 1:2187529‑M2/81‑149 (MQ=255) aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactgtcagtaagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCGTCTTCGGGTTTATCtt > 1:1844059‑M2/80‑149 (MQ=255) aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTATAACCGCATCTTCTGGTTTATCtt > 2:1443212‑M2/80‑149 (MQ=255) aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCttt < 1:838852‑M2/71‑1 (MQ=255) aatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttg < 2:715493‑M2/72‑1 (MQ=255) atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttgt > 1:542203‑M2/77‑149 (MQ=255) tcgggggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaattagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTCAAACCGCATCTTCTGGTTTATCTttgtt < 1:2551646‑M2/74‑1 (MQ=255) gggcggagctgcatgcaaaagtcagcgggcattatctgaacataaacccctagcgagaagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttgttg < 1:493100‑M2/75‑1 (MQ=255) cATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTCTCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 1:1367477‑M2/1‑82 (MQ=255) agatctTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 2:1256346‑M2/3‑81 (MQ=255) tatCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:1051099‑M2/1‑80 (MQ=255) ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCa < 1:605185‑M2/79‑1 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAgcgc > 2:1477060‑M2/67‑149 (MQ=255) tcttAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgttaatgaggtgcgccagtggcttctgtttctatcag > 2:2644759‑M2/1‑74 (MQ=255) tcgtAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttaccgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 2:2019294‑M2/1‑74 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactaacaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTTAAACCGCATCTTATTGTttatctttgttgtttgcggctt > 1:1019068‑M2/65‑141 (MQ=255) cttAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc > 2:1556947‑M2/1‑73 (MQ=255) tAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg < 2:400271‑M2/149‑79 (MQ=255) tAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 1:1631172‑M2/1‑71 (MQ=255) tAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgattgagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 2:107768‑M2/1‑71 (MQ=255) acagtcatcgggcattatctgaacataacacactatcaagaagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCaaa < 1:1739653‑M2/92‑1 (MQ=255) tGTCCCATTCGCCTTTAACCTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgaaggtgaaatagaaatgctacagtggcttctgtttctatcagctgtccctc > 2:1881823‑M2/1‑65 (MQ=255) catcgggcattatctgaacatacaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCaa < 1:782750‑M2/97‑1 (MQ=255) cATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt < 1:1106843‑M2/149‑90 (MQ=255) atcgggcattatctgaaaataaaccacgatcaataaggagggggcattaccGCCTGAACGATAGCAGGGGGTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCAGGATCAACTTTGTTGTTCAGCGCTTCAGCAAAACCAAc > 1:1459372‑M2/52‑149 (MQ=255) ttCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcg < 2:2001562‑M2/149‑92 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTGGTTGTTCAGCGCTTCAGCAAAACCAACTg > 2:1656329‑M2/50‑149 (MQ=255) gcattatctgaacataaatcactatcaataggttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAg < 2:58821‑M2/103‑1 (MQ=255) cattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGt < 2:1202804‑M2/104‑1 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGtt > 1:238972‑M2/45‑149 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccGCCGGAACGATAGCTGGGGTTACGGTTGCAGTACCCTGAACATCTAAAACCGCATCGGCTGGTTTATCTTTATTGTTCAGCGCTTCAGCAAAACCAACTGCAGtt > 2:532697‑M2/45‑149 (MQ=255) aCTTTAGCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggggatgctgccaacttactgatttagtgtatgatggtgttgttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagttactgacg < 1:37037‑M2/149‑102 (MQ=255) tttATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgttgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggg > 2:945542‑M2/1‑46 (MQ=255) ataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGa > 2:2417010‑M2/34‑149 (MQ=255) ataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGa < 2:27289‑M2/116‑1 (MQ=255) taaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGAt < 2:2574511‑M2/117‑1 (MQ=255) cTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt < 2:2180317‑M2/149‑109 (MQ=255) cTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt > 1:105811‑M2/1‑41 (MQ=255) aaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGAtt < 1:1946344‑M2/118‑1 (MQ=255) ttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgc > 2:830242‑M2/1‑39 (MQ=255) aacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCg < 2:669420‑M2/120‑1 (MQ=255) tatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCGATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAAGTGCAGTTGGCTGGAAGGATTCGTCcac > 2:1519761‑M2/25‑149 (MQ=255) tcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAg > 2:250081‑M2/23‑149 (MQ=255) gCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggca < 1:1048019‑M2/149‑120 (MQ=255) gCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggcgcgcaacggca < 1:2362933‑M2/149‑120 (MQ=255) ttGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa < 1:2304425‑M2/149‑122 (MQ=255) tGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa > 2:1599096‑M2/1‑27 (MQ=255) aTCCGGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc > 1:880318‑M2/1‑22 (MQ=255) ccTGAGTACAAGGCTGAACGggtgatgcttccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaccggcagtagtagctc > 1:698265‑M2/1‑20 (MQ=255) cTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc < 1:2355997‑M2/149‑131 (MQ=255) tGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttggtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatgagctgtccctcatgttcagctcctgacggaggggggcgtgacggcaaaagccccgcgg < 1:1773545‑M2/149‑132 (MQ=255) gtcattaccGCCTGGACGATAGCTGGGGTTACGGTTGCAATACCGTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAACGGGTCGTCCCCAGCCAGGAAAtctga > 2:247179‑M2/10‑147 (MQ=255) taccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAgg > 2:773252‑M2/5‑149 (MQ=255) accGCCTGAACGATAGCTGGGGCTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCGTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCATCACAGGt > 1:2534483‑M2/4‑149 (MQ=255) gCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc > 2:365457‑M2/1‑9 (MQ=255) gCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagatgctccagtggctgcggtttctatcagctgtccctcctgttcagctactgacggggtggtccgtgacgccaaaacacccgccggacagcacc < 2:1042123‑M2/149‑141 (MQ=255) | ATAGCTGCTTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCCA > CP009273/3649696‑3649992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |