New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 2298015161 (1.980)11 (0.140) 9/290 9.3 8.4% noncoding (120/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?CP009273 = 2298152 82 (1.030)noncoding (257/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 164 total aligned reads displayed.

GCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAAC  >  CP009273/2297868‑2298162
                                                                                                                                                   |                                                                                                                                                   
gCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGGGAAGTGCGCCACCCCGGCGGTcg                                                                                                                                                    >  1:577946/1‑148 (MQ=255)
  tAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCGGa                                                                                                                                                  >  1:1290979/1‑149 (MQ=255)
   aaaCTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCTAACAGCCCGGGGAAGTGCGGCACCCCGTAGGTCAGAc                                                                                                                                                 <  1:1008785/149‑1 (MQ=14)
   aaaCCGCCGTGAAGTGCGGCACCCCGTAGGTCAGATCAGGCGGTCACGCCGCAGCCGCCATCCAACGCCCGTGCCGGTTGCCTGATGCGACGCTGGCGCGTTTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGAc                                                                                                                                                 <  1:764363/149‑1 (MQ=14)
    aaCTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGCCATCCAGCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTTTCAGGCCTACACCGCGCTGAAGTGCGCCACCCCGTCGGCCAGaga                                                                                                                                                >  1:224976/1‑147 (MQ=11)
    aaCTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACa                                                                                                                                                >  1:225004/1‑149 (MQ=255)
       tGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTCGGACAAgg                                                                                                                                             >  1:1272810/1‑149 (MQ=17)
       tGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTGATCAGGCCAACGCCGCGGTGGAGTGCGGCGCCCCGTGGGGCGGAGAAg                                                                                                                                              >  2:630559/1‑148 (MQ=11)
          cGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                                                                                                                                          >  1:1150067/1‑149 (MQ=40)
          cGTGAAGTGCGACACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACAGCGCGGCAGGGCGGGACCGCGTGGCGCAGACAGGGCg                                                                                                                                           >  2:462159/1‑148 (MQ=11)
           gggAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                                                                                                                                          <  2:496051/146‑1 (MQ=255)
            tGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCCGCACCCCGTAGGTCGGACAAGGCGGt                                                                                                                                         >  2:207801/1‑148 (MQ=17)
                 tccgccACCCCGTAGGCCAGTCAGTGCGGTCACGCCGCATCCGACGTCCAACGCCCGGGCCGGTTGCCTGATGCGACGCCGGCGCGTCTTATCAGGCCTCCACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                                                                                                                    <  2:1142417/143‑1 (MQ=14)
                 tGCGGCACCCCGTAGGCCAGCCAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                                                                                                                    <  2:1030155/148‑1 (MQ=255)
                    ggCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGGAGCGCGGCACCCCGTAGGTCAGACCAGGCGGCCACGCCGCa                                                                                                                                >  1:1241237/1‑149 (MQ=255)
                       aCCCCGTCGGTCCGACACGGCGGTCACGCCCCATCCGACAGCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATc                                                                                                                              <  2:366201/148‑1 (MQ=14)
                         cccGTAGGTGAGCCTGGGCTGTCATGCCGCATACGACTTCCAACGCCCAAGCCGGTTGCCTGAGTCGACGCTGGCGCGGCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCg                                                                                                                            <  2:857788/148‑1 (MQ=14)
                         cccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGa                                                                                                                           <  1:804511/149‑1 (MQ=255)
                         cccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCCACACCGCTGTGAAGTGCGGCACCCCGTANGTCAGACAGGGAGGGCNGGCCGCATCCGa                                                                                                                           >  1:182046/1‑149 (MQ=14)
                             taggtgtggcAAGGCGGTCACGCCGCTTCCGCCGTCCGACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACAt                                                                                                                        <  2:332909/139‑1 (MQ=14)
                             tAGGTCAGACAAGGCGGTCACGCCGCACCCGACATCCACCGCCCGAGCCGGTTGCCTGATGCGACTCTGGCACGGCTGATCAGCCCTACACCGCTGTGAAGTGCGGCACCCCGTACGTCATACAAGGCTGTCACGCCGCATCCGACAt                                                                                                                        <  2:393760/148‑1 (MQ=14)
                              aGGTCAGGCAAGGCGGCCCCGCCTCATCCGACATTCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCGTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATc                                                                                                                       <  2:754741/148‑1 (MQ=14)
                              aGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATcc                                                                                                                      <  1:221337/149‑1 (MQ=255)
                                gTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCaa                                                                                                                    >  1:900728/1‑149 (MQ=255)
                                 tCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGGGAAGTGCGGCACCCCGTCGGGCGGGCAAAGCCGTCACGCCGCATCCGACATcccc                                                                                                                    >  2:262496/1‑146 (MQ=11)
                                   aGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGTTGTGAAGTGCGGCAGCCCCGAGAGCAGACAAGCCGGTCCCGCAGCATCCGACATCCAACGc                                                                                                                 >  1:449146/1‑149 (MQ=14)
                                   aGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGCCACCCCGTAGGTCGGACAAGGCGGTCACGCCGGATCCGAcgcgcaacg                                                                                                                  >  2:1070334/1‑140 (MQ=11)
                                      cAAGGCGGTCACGCCGCATCCGACATCCAACCCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGccc                                                                                                               <  2:425049/148‑1 (MQ=255)
                                       aaGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAGCAGGCCCACACCGCTGTGAAGCGCGCCACGCCGTAGGTCAGGCAAGGCGGTTAGGCGGCATCCGACAGCCAACCGCCGa                                                                                                             >  1:880069/1‑149 (MQ=11)
                                          gCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGAAGTGCGGCACCCCGTAGGTCCGCCAAGGCGGTCACTCCGCACCCGACATCCACGGCCCGAGca                                                                                                          >  1:82664/1‑148 (MQ=14)
                                            ggTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGGCACGCCGCATCCGACATCCAAGCCCCGACCCg                                                                                                         >  2:361896/1‑148 (MQ=14)
                                               cACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTg                                                                                                     >  1:153726/1‑149 (MQ=255)
                                                 cgcagcactggACATCAAACGCCCGAGGCGGTTGCCTGATGCGACGCTGGCGCGGCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGcc                                                                                                   <  1:977588/139‑1 (MQ=17)
                                                     gcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAt                                                                                               >  1:427375/1‑149 (MQ=255)
                                                     gcATCCGACAGCCAACGCCCGACCCGGTTGCCGGATGCGACGCTGGCGCGTCTTATCAGGCCTAAACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAt                                                                                               <  1:479907/149‑1 (MQ=255)
                                                           gcgggccAATGCCCGTGCCGGTTGCCGGAGGGGACGCCGGCGCCTCTTATCAGCCCCAAACCGCCGTGAAGTGCGGCACCCCGTAGGTCAGACCAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                          <  2:972429/143‑1 (MQ=14)
                                                              aTCCAGCGCCCGAGCCGGTTGCCTGATGCGACGCTGACGCGTCTTAGCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTg                                                                                      <  1:1132206/149‑1 (MQ=255)
                                                                ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCGGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                     >  2:1085967/1‑148 (MQ=255)
                                                                 cagcGCCCGGCCTGGTCGCCTGGTGGGTCGTTGGAGCGGCTGTTCAGGGCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgc                                                                                    <  2:298884/145‑1 (MQ=14)
                                                                 caacacatgAGCCGGTTGCCTGATGCGACGCTGGCGCGTCATCTCAGGCCTACACCGCTGTGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGTCACGCCGCACCCGACATCCAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgc                                                                                    >  2:825764/9‑148 (MQ=14)
                                                                 cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCGGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGACGCCACGCAGgc                                                                                    >  2:758994/1‑148 (MQ=255)
                                                                 cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAGGCGAGGCCGgcg                                                                                   >  1:359728/1‑149 (MQ=255)
                                                                  aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGCTGCGACGCAGgcgc                                                                                  >  1:1353514/1‑149 (MQ=255)
                                                                  aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgctc                                                                                  >  1:401541/1‑147 (MQ=255)
                                                                     gCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCCACGCCCGAGCCGGTTGCCTGATGCGAGGCTGGcgcgc                                                                                >  2:126426/1‑147 (MQ=255)
                                                                          aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATc                                                                          >  1:706633/1‑149 (MQ=255)
                                                                            ccGGTGGCTGGAGGCGACGTTGGCGCGGCGTAACGTGCCTAGACCGCGGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                         <  2:1093553/148‑1 (MQ=11)
                                                                              ggTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                                      <  1:1363741/149‑1 (MQ=255)
                                                                               gTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                     <  1:868256/149‑1 (MQ=255)
                                                                               gTTGCCTGATGCGACGCTGGCGCGTCGTAACAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                                      <  2:916317/148‑1 (MQ=255)
                                                                                   cttGATGCGACGCTGTCGCGGCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTaca                                                                 <  1:73306/147‑1 (MQ=255)
                                                                                    cTGAGGCGACGCTGGCGCGTTTTATGAGGCCTACACCGCTGTGAAGGGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTacac                                                                <  1:593154/149‑1 (MQ=255)
                                                                                         gCGAAGCTGGCGCCTCGTATCTGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCt                                                            <  2:84506/148‑1 (MQ=255)
                                                                                          cGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtgc                                                          >  1:720380/1‑148 (MQ=255)
                                                                                              gttGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAg                                                      <  1:1261263/147‑1 (MQ=255)
                                                                                              gCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCAGATCCGACGCGCGCGCGTCTTATCTGGCCTCCCCCACCGTGacg                                                      >  1:1182548/1‑147 (MQ=17)
                                                                                              cgtGGCGCGTCTTTGCCGGCTTACACCGCCGTGCAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                                       <  2:951989/146‑1 (MQ=11)
                                                                                               cTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCGGACAAGGCGGTCCCGCCGCCTCCGACCTCCAACGCCCGAGCCGGTTGCCTGATGCGCCGCTGGCGCATCTTATCAGGCCTACACCGCTGTGAAGt                                                     >  1:344981/1‑149 (MQ=14)
                                                                                                  gcgcGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGCTGCGCCGCTGCCGCGTCTGATCAGGCCTACACCGCTGTGCAGTGCt                                                  >  1:1055161/1‑149 (MQ=17)
                                                                                                   cgcgTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTCATCAGGCCTACACCGCTGTGAAGTGCTc                                                 <  1:893782/149‑1 (MQ=255)
                                                                                                      gTCTTATCAGCCCTAAACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAc                                              <  1:439248/149‑1 (MQ=255)
                                                                                                      gTCGTATCTGGCCTACACCGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCa                                               <  2:441955/148‑1 (MQ=255)
                                                                                                        ctgaTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAccc                                            <  1:1018145/146‑1 (MQ=255)
                                                                                                         ttATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGAGTTCGCAGGCCTCCCCCGCGGTGACGAGCTCCAcacc                                           >  1:283794/1‑149 (MQ=17)
                                                                                                         ttATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCCTCTTATCAGGCCTCCACCGCTGTGAGGTGCTCCAcccc                                           >  1:522404/1‑149 (MQ=255)
                                                                                                          tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGGCATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCg                                          <  1:735238/149‑1 (MQ=255)
                                                                                                             cAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAg                                       <  1:533226/149‑1 (MQ=255)
                                                                                                              gtggcTACACGGCTGGGAAGTGCGGCACCCCGTAGGTCGGATAGGGCGGTCACGCCGCATCCGACATCGAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAg                                       <  2:177943/144‑1 (MQ=11)
                                                                                                               ggCCTACACGGCCGGGAAGTGCGGCCCCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGt                                     <  1:117473/149‑1 (MQ=255)
                                                                                                               ggCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGCCGCTGGCGCGTCTTCTCAGGCCTACACCGCCGCGAAGTGCTCCCCCCAGCAgg                                      >  2:1079133/1‑148 (MQ=14)
                                                                                                                gCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGtggat                                     >  2:546104/1‑144 (MQ=255)
                                                                                                                gCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTc                                    <  1:605028/149‑1 (MQ=255)
                                                                                                                gCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTc                                    <  1:133634/149‑1 (MQ=255)
                                                                                                                     cacCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTGTCAGGCCTACACCGCTGTGACGTGCTCCACCCCGGAGGTCGGATa                               >  1:1051953/1‑149 (MQ=255)
                                                                                                                         gctcttccggtctgCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAgg                            <  2:495786/135‑1 (MQ=255)
                                                                                                                           tgtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGGGCTCCACCCCGTCGGGCGGAGAAgggg                          >  2:161605/1‑146 (MQ=255)
                                                                                                                            gtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTCCACCGCTGTGAAGTGCTCCACCCCGTAGATCGGATAAGGCgg                         >  2:1132637/1‑148 (MQ=255)
                                                                                                                            gtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                         <  2:68449/148‑1 (MQ=255)
                                                                                                                            gtgAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                         >  2:583181/1‑148 (MQ=39)
                                                                                                                            gtgAAGCGCGGCACCCCGTAGGTTAGGCAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                         <  2:1080287/148‑1 (MQ=255)
                                                                                                                             tgAAGTGCGGCACGCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCACTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt                        <  2:832017/148‑1 (MQ=255)
                                                                                                                               aaGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCGGCCGCGTAGGTCGGATAAGGCgggtg                      >  2:72891/1‑145 (MQ=255)
                                                                                                                               aaGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCCCCACCCCGTAGGCCGGATAAGGCGGTTAc                     >  1:698999/1‑149 (MQ=255)
                                                                                                                                 gcgccgcgccccGTTGGCCAGCCAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                    <  2:532134/140‑1 (MQ=14)
                                                                                                                                 gTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                    >  2:1219950/1‑148 (MQ=255)
                                                                                                                                 gTGCGGCACCCCGGAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgc                   <  1:1166381/149‑1 (MQ=255)
                                                                                                                                  tGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCGGTGAAGTGCTCCACCCCGTAGGCCGGATAAGGCGGTTCcgc                   >  2:81953/1‑148 (MQ=255)
                                                                                                                                   gcgcCACCCCGTAGGTCCGACAAGGCCGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTAcgcc                  <  2:6529/148‑1 (MQ=255)
                                                                                                                                   gCGGCACCCCGTAGGGCGGCCAGGGAGCGTACTCCGCATGCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTGATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTAcgcc                  <  2:1198768/148‑1 (MQ=11)
                                                                                                                                     ggCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGGTAAGGCGGttcggcggc                >  2:448120/1‑141 (MQ=255)
                                                                                                                                     ggCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCa               >  1:175954/1‑149 (MQ=255)
                                                                                                                                      gCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAt              >  1:1063112/1‑149 (MQ=255)
                                                                                                                                      gCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTGATCAGGCCTGCACCGCGGAGAGAAGGTCCACCCCGTAGGGTGGAGATGGCGGTGGCGGCGCa               >  2:176599/1‑148 (MQ=11)
                                                                                                                                       cACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGGCGGATAAGGCGGTTACGCCGCac              >  2:313238/1‑147 (MQ=255)
                                                                                                                                          cccGTAGGTTAGAAAAGGCGGTCACGCCGCATCCCACACCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGa          <  1:338231/149‑1 (MQ=255)
                                                                                                                                          cccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGGGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAGCCg           >  2:909768/1‑148 (MQ=255)
                                                                                                                                              tAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATCAGGCGGTTACGCCCCATCCGACATc      >  1:112921/1‑149 (MQ=255)
                                                                                                                                               aGGTCAGACAAGGCGGTCACGCCGCATCCGACACCCAACGCCCGCGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATc      <  2:205689/148‑1 (MQ=255)
                                                                                                                                                  tCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCAACCGACATCTaa   >  2:416664/1‑148 (MQ=255)
                                                                                                                                                   cAGACAAGGCGGTCACGCCGCATCCGCCATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAAc  <  2:1231742/148‑1 (MQ=38)
                                                                                                                                                   |                                                                                                                                                   
GCTAAACTGCCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAAC  >  CP009273/2297868‑2298162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.