New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1391496	NA (NA)	46 (0.690)	38/290	0.9	97.9%	intergenic (+147/‑126)	insH1/ynaJ	IS5 transposase and trans‑activator/DUF2534 family putative inner membrane protein
	?	CP009273	1539170 =	1 (0.010)					pseudogene (802/951 nt)	yddK	pseudogene, leucine‑rich protein; putative glycoportein

TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGT  >  CP009273/1391354‑1391643                                                                                                                                               |                                                                                                                                                    tGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCctaacta                                                                                                                                               >  2:1113100/1‑149 (MQ=31)    ggATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTAGCACCTTCCctaacta                                                                                                                                               >  1:90484/1‑146 (MQ=14)     gctcaCGCTTTAAATGGCGCAGAAGCGGGCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCctaactaa                                                                                                                                              <  1:993071/142‑1 (MQ=11)     gATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCctaactaa                                                                                                                                              >  1:299004/1‑146 (MQ=32)      aTAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCaa                                                                                                                                          <  2:660353/149‑1 (MQ=35)         aCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTTATTCACGGCCATTACGGGAGAAAAAATCGGCTCAAACATGAAGACATGAAATGACTGAGTCAGCCGAGACGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGc                                                                                                                                       <  2:1007165/149‑1 (MQ=11)         aCGCCTTAAAAGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGc                                                                                                                                       <  2:739543/149‑1 (MQ=38)                aaaTGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGAtt                                                                                                                                >  2:673997/1‑149 (MQ=255)                aaaTGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGAtt                                                                                                                                >  2:673959/1‑149 (MQ=255)                aaaTGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAACGCATTGAtt                                                                                                                                <  2:197768/149‑1 (MQ=255)                     gCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTaaa                                                                                                                           >  2:1000544/1‑149 (MQ=255)                     gCGAAGAAACGGTCTAAATAAGCTGATTCAAGGCATTTACGGGAGAAAACATCGGCTCCAACACGAGGAAGTGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCGCCTTCCCTAACTAATCAATGCGTTGATAGt                                                                                                                              >  1:223644/1‑146 (MQ=14)                      caaagaaACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCACTTATTCGCACCTTCCCTAACTAATCAACGCATTGAttagttag                                                                                                                          <  2:569720/147‑7 (MQ=11)                       gaagaaACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTGCAAACTTCCCTAACTAATAAGTACGTTGATTTTaa                                                                                                                            >  1:969689/1‑146 (MQ=11)                          gaaACGGTCTAAATAGGCTGATCCAAGGTATTTACAGGAGAAAAAATCGGCTCAAACATGAAGCAATGAACTGACTCAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATc                                                                                                                         <  1:323437/146‑1 (MQ=17)                           aaaCGGTCTAAATAAGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATcc                                                                                                                        <  1:14928/146‑1 (MQ=255)                            aaCGGTCTACATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAGTCCa                                                                                                                       <  1:524263/146‑1 (MQ=255)                             aCGGTCTAAAGAGGCTGATCCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAg                                                                                                                      <  1:416766/146‑1 (MQ=255)                                gTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTa                                                                                                                   >  1:768676/1‑146 (MQ=255)                                gTCTAAATAGGCGGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCGTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAaga                                                                                                                <  2:443047/149‑1 (MQ=255)                                   tAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATGGTAAATGCAGCTACgaggt                                                                                                             >  2:289659/1‑149 (MQ=255)                                    aactAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAagag                                                                                                               <  1:526168/143‑1 (MQ=255)                                             gATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCa                                                                                                   <  2:275276/149‑1 (MQ=255)                                              attcacgctaTTGACGGGTGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTACCTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCag                                                                                                  <  2:493089/140‑1 (MQ=21)                                               ttCAAGGGAATTACGGGAGAAAAAATCGGCTCAAACATGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTc                                                                                                    <  1:306160/146‑1 (MQ=255)                                               ttCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAACCCATGCGTTGGTTGTAAATCCAGCTAAGAGGGGAGGTTTTCaga                                                                                                 >  2:1067948/1‑149 (MQ=255)                                                 cAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCATCCGAGAAGAATTCCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGc                                                                                               <  2:596993/149‑1 (MQ=255)                                                 cAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATTCGTTGATTGTAAATCAAGCTAAGCGGTGAGGTTTTCag                                                                                                  >  1:276636/1‑146 (MQ=255)                                                 cAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGc                                                                                               <  2:617959/149‑1 (MQ=255)                                                   aGGCAGTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCAGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAACCCAGCTAAGAGGTGAGGTTTTCagag                                                                                                <  1:439936/146‑1 (MQ=255)                                                     gCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTACCTAATCAATGCGTTGCTTGTACATCCAGCTCAGAGGTGAGGTTTTCAGAGCAggc                                                                                           >  2:1008562/1‑147 (MQ=255)                                                     gCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCa                                                                                              >  1:763215/1‑146 (MQ=255)                                                       aTTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTACTCCCTGTTCTGATGGTAACTCTAGCTAAGAGGGGAGGTTTTCAGAGCAGACaa                                                                                         >  2:263737/1‑149 (MQ=17)                                                        tttACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCAGAGAAGAATTTACCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGAc                                                                                           >  1:250106/1‑146 (MQ=255)                                                                   aaacaTCGGCTCAAACATGAACAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCCATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACTGTTAAAt                                                                                <  1:638360/146‑1 (MQ=25)                                                                    aaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCa                                                                            <  2:330217/149‑1 (MQ=255)                                                                      aaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTCCCTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTc                                                                             <  1:842186/146‑1 (MQ=255)                                                                      aaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTGTCAGAGCAGACAACGGTGAAATGTCATg                                                                          >  2:715967/1‑149 (MQ=255)                                                                          ggCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTAt                                                                      <  2:293985/149‑1 (MQ=255)                                                                          ggCTCAAACATGAAGAAATGAAATGACTGAGTAAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCACTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATgcacggg                                                                         >  1:134499/1‑140 (MQ=255)                                                                            cTCAAACATGAAGAAATGAAATGACCGAGTCAGCCGGGAAGAATTCCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTg                                                                    <  2:874137/149‑1 (MQ=255)                                                                             tCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAGGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTAt                                                                      >  1:152366/1‑146 (MQ=255)                                                                              cAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAAGCCAGCTACAATTTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGtt                                                                  <  2:274126/149‑1 (MQ=25)                                                                               aaaCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGATTATTCGGACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCCGCAAATGGTGAAATGTCAAGGTGTTg                                                                    >  1:653168/1‑146 (MQ=25)                                                                                aaCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGt                                                                   >  1:860895/1‑146 (MQ=255)                                                                                 aCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACg                                                               <  2:60543/149‑1 (MQ=255)                                                                                 aCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACg                                                               >  2:738620/1‑149 (MQ=255)                                                                                  cATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTa                                                                 >  1:496650/1‑146 (MQ=255)                                                                                  cATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCAGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCATAGCAGACAGCGGTGAAATGTCATGGTATTGTTa                                                                 >  1:686591/1‑146 (MQ=255)                                                                                   aTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGtt                                                             <  2:75627/149‑1 (MQ=255)                                                                                       agagATGAAATGAATGAAACAGTCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGttt                                                            <  1:264640/146‑1 (MQ=38)                                                                                        gaaatgaaatGACTGAGTCAGCCGGGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGCGCAGACAACGGTGCAGTGTCATGGGATTGTTACGGTTAGGt                                                        >  2:372211/1‑149 (MQ=37)                                                                                        gaaatgaaatGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAAGGTCATGGTATTGTTACGTTTa                                                           >  1:491678/1‑146 (MQ=255)                                                                                        gaaatgaaatGACGGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTa                                                           >  1:910116/1‑146 (MQ=255)                                                                                            tgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACa                                                    <  2:651072/149‑1 (MQ=255)                                                                                             gaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTaa                                                      <  1:1030841/146‑1 (MQ=255)                                                                                                 tgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAACGTCATGTTATTGTTACGTTTAGGTAACAAGaaa                                               <  2:562670/149‑1 (MQ=255)                                                                                                  gaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAAt                                              >  2:49918/1‑149 (MQ=255)                                                                                                           aGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGca                                     >  2:1076383/1‑149 (MQ=255)                                                                                                              cGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGca                                     <  1:31755/146‑1 (MQ=255)                                                                                                                 gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGa                               <  2:656690/149‑1 (MQ=255)                                                                                                                 gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATGGTAAATCCAGCTAAGAGGGGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGCTTAGGAAACAAGAAATGTTTCTGCACAAGGa                               >  2:23373/1‑149 (MQ=39)                                                                                                                    gaaTTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTa                            >  2:911809/1‑149 (MQ=255)                                                                                                                    gaaTTTCCACGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGa                               <  1:409852/146‑1 (MQ=255)                                                                                                                       tttCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTAcat                         <  2:992230/149‑1 (MQ=255)                                                                                                                        ttCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCCGCTAGGAGGTGAGGTTTTCCGAGCAGACAACGGTGAAATGTCATGGTATTATCACGCATAGGTAACAAGAAATTTGTCTACACAAGGATTAcatc                        >  2:327535/1‑149 (MQ=255)                                                                                                                        ttCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTAcatc                        <  2:238668/149‑1 (MQ=255)                                                                                                                         tCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTAca                          <  1:210487/146‑1 (MQ=255)                                                                                                                              gCTTATTCGCACCTTCCCTAACTAGTAAGTGCGTTGATTGTAAATCCAGCTGAGAGGAGAGGTTTTCAGACCAGACTACGGCGCAATGTCATAGTATTGATACGTTTAGGTAACAAGAAATTNGTANGNACAAGGATTACATCATGAtt                  >  2:858435/1‑149 (MQ=255)                                                                                                                              gCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTAAATCATGAtt                  >  2:305386/1‑149 (MQ=255)                                                                                                                               cTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCTAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTa                 <  2:341369/149‑1 (MQ=255)                                                                                                                                ttATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTAt                >  2:472531/1‑149 (MQ=255)                                                                                                                                ttATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTAt                <  2:939750/149‑1 (MQ=255)                                                                                                                                 tATTCCCACCTCCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGAtt                  <  1:829124/146‑1 (MQ=255)                                                                                                                                  aTTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATgg              >  2:611236/1‑149 (MQ=255)                                                                                                                                   ttCGTACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTAt                <  1:341642/146‑1 (MQ=255)                                                                                                                                   ttCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTAGGTTTAGGTAGCAAGAAATTTGTCTGCACCAGGGTTACATCGTGGTTATGGc             >  2:298685/1‑149 (MQ=255)                                                                                                                                   ttCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCTTGATTATGGc             >  2:1040382/1‑149 (MQ=255)                                                                                                                                     cGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGCCAACGGTGAAATGTCAGGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATgg              >  1:159924/1‑146 (MQ=255)                                                                                                                                       cACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGATAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGaaa         <  2:135761/149‑1 (MQ=255)                                                                                                                                         ccTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGaa          >  1:1035273/1‑146 (MQ=255)                                                                                                                                          cTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGaaa         >  1:736499/1‑146 (MQ=255)                                                                                                                                          cTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTg      >  2:837510/1‑149 (MQ=255)                                                                                                                                             cccTACCTAATCAATGAGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAg   <  2:493553/149‑1 (MQ=255)                                                                                                                                             cccTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGGCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTg      >  1:434452/1‑146 (MQ=255)                                                                                                                                              ccTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGt  <  2:995148/149‑1 (MQ=255)                                                                                                                                               ctaactaaTCAATGCGTTGATTGTAAATCCAGCTAAGCGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTTaa    >  1:452301/1‑146 (MQ=255)                                                                                                                                               ctaactaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAACCTGaa    >  1:488561/1‑146 (MQ=255)                                                                                                                                               ctaactaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGaa    >  1:173912/1‑146 (MQ=255)                                                                                                                                               |                                                                                                                                                    TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGT  >  CP009273/1391354‑1391643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.