New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1162858 =	NA (NA)	6 (0.070)	6/274	12.0	NA	noncoding (1/30 nt)	REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	CP009273	1162888 =	NA (NA)					intergenic (+43/‑167)	ndh/ycfJ	respiratory NADH dehydrogenase 2/cupric reductase/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.

ACGAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGATAGCTGCTTTT  >  CP009273/1162710‑1163006                                                                                                                                                     |                                                                                                                                                     aCGAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTACTCGACGGAGACTg                                                                                                                                                      >  1:519062/1‑149 (MQ=255)   gAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGc                                                                                                                                                    <  1:604527/149‑1 (MQ=255)     aTTGCGCGCTTTGTATACATCCCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCgg                                                                                                                                                  <  1:118649/149‑1 (MQ=255)       tGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTCACTTTAAAACCGGATTAATGATGCTGGTGGGGAGGATTAACCGCGTTATCCGTCCGCGTTTGGAGTTGCATTAATCGACGTACAATg                                                                                                                                                      >  2:533225/1‑143 (MQ=255)        gcgcgcTTTGTAGATCTCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGAtg                                                                                                                                               <  1:1215941/149‑1 (MQ=255)         cgcgcTTTGTATATATCTCGCTATCCCGAATGTATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGAtgt                                                                                                                                              <  1:1393426/149‑1 (MQ=255)          gcgcTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTGATCGACGTACACTGGCGGAtgtg                                                                                                                                             <  1:822055/149‑1 (MQ=255)           cgcTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTgg                                                                                                                                            <  1:331314/149‑1 (MQ=255)            gcTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTGACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCGTTAATCGACGTACACTGGCGGAtagcgc                                                                                                                                           >  1:624442/1‑144 (MQ=255)              tttGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGAGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCAt                                                                                                                                         >  1:820479/1‑149 (MQ=255)                 ttatatgTCGCGCTATACCGAATGCATCAGAGTGCGCTGCATGGTTACTTTAAAACCGGATGAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAAGCGACGTACACTGGCGGATGTgg                                                                                                                                            <  2:846776/142‑1 (MQ=255)                   ctatatCTCGCTACTCCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTTATGATGCTGGTGGGGAGTATTACCCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCa                                                                                                                                          <  2:1364730/142‑1 (MQ=255)                         ctcGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTGAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAGGTTGCGTTAATCGCCGTACTCTGGCGGATGTGGCGGAAATGCCTCAt                                                                                                                              >  1:1354647/1‑149 (MQ=255)                         cccgttataCCGAAGGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCAt                                                                                                                              <  1:747698/144‑1 (MQ=255)                            gCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCATCATCCg                                                                                                                           >  1:1361178/1‑149 (MQ=255)                                     aaTGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAgg                                                                                                                  <  1:1432057/149‑1 (MQ=255)                                       tGCATCAGATTGCGCCGCAGGGCTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGaa                                                                                                                <  1:29663/149‑1 (MQ=255)                                         cagcAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGGCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGa                                                                                                                    <  2:409319/140‑1 (MQ=255)                                         cATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGa                                                                                                                    >  2:391711/1‑143 (MQ=255)                                          aTCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGGTGTGGCATAAACGCCTCATCCGCCCTTGAg                                                                                                                   >  2:1023906/1‑143 (MQ=255)                                          aTCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAg                                                                                                             >  1:1281009/1‑149 (MQ=255)                                          aTCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGGTTGAAGTTGCATTAATCGACGTAGACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAAcgg                                                                                                             >  1:177414/1‑147 (MQ=255)                                            cAGATTGCGCTGCATGGTAACTTTAAAACCAGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGAATTAACGACTCATCCGCCCTTGAGGa                                                                                                                 >  2:289179/1‑143 (MQ=255)                                                 tGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATc                                                                                                      >  1:596464/1‑149 (MQ=255)                                                  gcgcTGCATGTTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCg                                                                                                     <  1:79921/149‑1 (MQ=255)                                                     cTGCATGGTTACTTTAAAACCGGAGCAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCa                                                                                                  <  1:939855/149‑1 (MQ=255)                                                        cATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAGCGGGGCGATCGGCAGcc                                                                                               >  1:569032/1‑149 (MQ=255)                                                        cATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGCTCg                                                                                                     >  2:666749/1‑143 (MQ=255)                                                        cATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGAAACAGCGCGAtag                                                                                                     >  2:667116/1‑141 (MQ=255)                                                         aTGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTAAACTGGCGGATGTGGCATAAACGGCTCATCCGCCCTTGAGGAACAGCGCGATCgg                                                                                                    >  2:732687/1‑143 (MQ=255)                                                           ggTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCcgcg                                                                                            >  1:387294/1‑149 (MQ=255)                                                            gTTACTTTACATCCGGATTAATGTAGCTGGTGGGGAGTATTAACCTCGTTATCCGTCCGCGTTTGAAGTTGCATTATTCCACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAg                                                                                                 <  2:1153219/143‑1 (MQ=255)                                                                 tttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGCTGTGGCATAAACGCCTCATCCGCCCTTGAGGACCAGCGCGATCGGCAGCCGCGTTGTAt                                                                                      >  1:45566/1‑149 (MQ=255)                                                                 tttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATAGACGTACACTGGCGGATGTGGCGTAAACGCGTCATCCGCCCTTGAGTAACAGCGAGCTCCGCAGCCGCGGTGTAt                                                                                      >  1:508276/1‑149 (MQ=255)                                                                  ttAAAACCGGATTAATGGTGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGt                                                                                           <  2:549662/143‑1 (MQ=255)                                                                  ttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGt                                                                                           <  2:746448/143‑1 (MQ=255)                                                                  ttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGt                                                                                           >  2:1170130/1‑143 (MQ=255)                                                                  ttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATc                                                                                     <  1:135027/149‑1 (MQ=255)                                                                  ttAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATc                                                                                     >  1:1273636/1‑149 (MQ=255)                                                                   tAAAACCGGTTTAATGGTGCTGGTGGGGAGTATTAACCGCGTTGTCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGCGGAACGGCGCGATCGGTAGCCGCGtt                                                                                          <  2:334721/143‑1 (MQ=255)                                                                      aaCCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGc                                                                                 >  1:597265/1‑149 (MQ=255)                                                                       aCCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTAt                                                                                      >  2:627594/1‑143 (MQ=255)                                                                         cggagcaaggatgCTGGTGTGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCACCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATc                                                                              <  1:1270834/140‑1 (MQ=255)                                                                          tgATTAATGATGCTGGTGGGGAGTATTACCCGCGTGCTCCGTCCGCGTTTGAAGTTGCATTGATCGACGCACACTGGCGGATGGGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGAGCGGCAGCCGCGTTGTATCAg                                                                                   <  2:1099062/142‑1 (MQ=255)                                                                              tAATGATGCTGGTGGGGAGTATTAACCGCTTTATCCGTCCGCCTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTc                                                                         <  1:806323/149‑1 (MQ=255)                                                                               aaTGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGCACAGCGCGATCGGCAGCCGCGTGGTATGAGGcgac                                                                              >  2:285084/1‑140 (MQ=255)                                                                                     gCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATTCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCa                                                                        <  2:991984/143‑1 (MQ=255)                                                                                       tggtggGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTACCAGGCATCCTTTCAGa                                                                      >  2:971842/1‑143 (MQ=255)                                                                                       tggtggGGAGTATTAACCGCGTTATCCGACCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCCGCCGCGTTGTATCAGGCATCCTGTCAGActcctc                                                                >  1:804058/1‑149 (MQ=255)                                                                                         gtggGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACCCTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAGCAGCGCGATCGGCAGCCGCGTTGCATCAGGCATCATTTCAGAct                                                                    >  2:1250492/1‑143 (MQ=255)                                                                                             gaagaaTTAACCGCGTTATCCGTCCCCGTTTGAAGTCGCATTAATCGACGTACACTGGCCGATGTCGCATAAACGCCTCATCCGCCCTTGAGCAACAGCGCGATCAACAGCCGCGTTGTATCAGGCATCCATTCAGActccac                                                                <  2:1257535/138‑3 (MQ=255)                                                                                              gggTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACtcctcc                                                               <  2:743458/141‑1 (MQ=255)                                                                                                gTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATTCTTTCTTACTCCTCCGa                                                             <  2:503120/143‑1 (MQ=255)                                                                                                 tATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGaa                                                            >  2:512099/1‑143 (MQ=255)                                                                                                  aTTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTaa                                                     <  1:535630/149‑1 (MQ=255)                                                                                                        cgcgTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTAttt                                               >  1:14171/1‑149 (MQ=255)                                                                                                            ttATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTAt                                                 <  2:386516/143‑1 (MQ=255)                                                                                                             tATCCGTCCGCGTTTGAAGGTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTCGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGc                                          >  1:1089157/1‑149 (MQ=255)                                                                                                                          ttGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCtt                             >  1:1271376/1‑149 (MQ=255)                                                                                                                             aaGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTc                          <  1:586210/149‑1 (MQ=255)                                                                                                                              aGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCa                         >  1:641687/1‑149 (MQ=255)                                                                                                                               gTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCt                              <  2:1099685/143‑1 (MQ=255)                                                                                                                                   cATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTc                          <  2:777133/143‑1 (MQ=255)                                                                                                                                    aTTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCAAGCCATTCCCGCGCTTTTCa                         >  2:1179012/1‑143 (MQ=255)                                                                                                                                     ttAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCAt                        <  2:1177075/143‑1 (MQ=255)                                                                                                                                       aaTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTtcttct                      >  2:146610/1‑143 (MQ=255)                                                                                                                                        aTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCTGCGCTTTTCATCTtctgtct               <  1:428203/149‑1 (MQ=255)                                                                                                                                        aTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCgtctgtct               >  1:612351/1‑149 (MQ=255)                                                                                                                                          cGACGTACACTGGCGGATGTGGCATCAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGa             <  1:1007982/149‑1 (MQ=255)                                                                                                                                          cGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGa             <  1:174559/149‑1 (MQ=255)                                                                                                                                            aCGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTtctgt                 >  2:521848/1‑143 (MQ=255)                                                                                                                                               tACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTCTCATCTtctgtctc              >  2:1030523/1‑142 (MQ=255)                                                                                                                                                 cacTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGGATCCTTTCAGACTCCTCCGACTCCTTAAGTATTTCCAGCCATTCCCGCGCTATTCACAGTCTGTCTGAt            >  2:409623/1‑143 (MQ=255)                                                                                                                                                  acTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGCTa           >  2:338199/1‑143 (MQ=255)                                                                                                                                                     ggCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGATAGCTGCtttt  <  1:338084/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ACGAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTTGAGGAACAGCGCGATCGGCAGCCGCGTTGTATCAGGCATCCTTTCAGACTCCTCCGAATCCTTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGATAGCTGCTTTT  >  CP009273/1162710‑1163006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.