BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1068445 =	94 (1.210)	4 (0.050)	4/266	11.2	4.0%	noncoding (92/98 nt)	RIP92 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site	RIP92 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site
*	?	NC_000913	4027382 =	103 (1.400)	4 (0.050)	4/266	11.2	4.0%	noncoding (62/281 nt)	REP291 (repetitive extragenic palindromic) element, contains 6 REP sequences	REP291 (repetitive extragenic palindromic) element, contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 108 total aligned reads displayed.

CCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATG  >  NC_000913/4027240‑4027524

cccgcctgtcaggggCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATa                                                                                                                                                 >  2:79808/14‑143 (MQ=255)

 ccGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTCGGCCGGCTaa                                                                                                                                                >  2:144329/1‑143 (MQ=255)

 ccGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATaa                                                                                                                                                >  2:537663/1‑143 (MQ=255)

 ccGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATACAGACGACAAATAGTCCGAACCGTAGGCCGGATaa                                                                                                                                                >  2:1273698/1‑143 (MQ=38)

  cGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAg                                                                                                                                               <  2:818803/143‑1 (MQ=255)

  cGCCCCCGGCAGGCGGGAAGAACGGCAACTAACCTGTTACTCAGTGGCATTTAGAGCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGATCTGTAGGCCGGATAAg                                                                                                                                               <  1:100635/143‑1 (MQ=25)

   gCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAgg                                                                                                                                              >  2:1237826/1‑143 (MQ=255)

    ccctttaCAGGCTGGAAGAACTGCATCTAACCTGTCATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGc                                                                                                                                             <  1:367038/137‑1 (MQ=25)

     cccTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCg                                                                                                                                            <  2:550893/143‑1 (MQ=255)

     cccTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCg                                                                                                                                            >  1:314615/1‑143 (MQ=255)

      ccTGACAGGCGGGAAGAACGGCAACTAAACTGTGATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGt                                                                                                                                           >  2:1354808/1‑143 (MQ=255)

          aCAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTAGGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAc                                                                                                                                       <  2:510966/143‑1 (MQ=255)

            cggCGGGAAGAACGGCAACTAAGCTGTTATTCCGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                                                                     <  1:1142224/142‑1 (MQ=255)

             ggggtgaagaaCGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAcgcc                                                                                                                                    <  2:1264095/138‑1 (MQ=255)

                     gaaCGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                                                                                            >  1:613629/1‑143 (MQ=255)

                        cGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCGGAACCGTAGGCCGGATAAGGCGGTTACGCCGCATCCGGCaa                                                                                                                         >  2:1064034/1‑143 (MQ=255)

                        cGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCACCCGGCaa                                                                                                                         >  1:1055346/1‑143 (MQ=255)

                         gtcAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCGCGATGCGACGCTGTCGCGTCTTATCGTGCTTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                                                                                                        <  2:244002/141‑1 (MQ=255)

                           cAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTg                                                                                                                      >  2:25794/1‑143 (MQ=255)

                             aCTAAACTGTTATTCAGTGGCATTTAGCTCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGt                                                                                                                    <  2:324121/143‑1 (MQ=255)

                               tAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGc                                                                                                                  >  2:361537/1‑143 (MQ=255)

                               tAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGc                                                                                                                  <  2:901576/143‑1 (MQ=255)

                                 aaCTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCCATTGGTGCag                                                                                                                >  1:857307/1‑142 (MQ=255)

                                 aaCTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCat                                                                                                                <  2:859181/143‑1 (MQ=255)

                                  aCTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGtt                                                                                                                                          >  2:470702/1‑116 (MQ=255)

                                  aCTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGtt                                                                                                                                          <  1:470702/116‑1 (MQ=255)

                                    tGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCatgat                                                                                                             >  1:1216645/1‑143 (MQ=255)

                                     gTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGACGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCatgatg                                                                                                            >  2:923931/1‑143 (MQ=255)

                                        aTTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCt                                                                                                         >  1:653351/1‑143 (MQ=255)

                                        aTTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCt                                                                                                         >  1:729467/1‑143 (MQ=255)

                                           cAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTGTGGTTATGAGAAATAGCCAGCCTACTTTTCTGTAGATGGCGGGTACGCCGCATCCGGCAATTGGTGCATGATGCCTGAt                                                                                                      <  2:314615/143‑1 (MQ=16)

                                            aggggCATTTCGCTGTATGCCGTATCTGGCAAACGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATg                                                                                                     <  1:985688/140‑1 (MQ=14)

                                            aGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATg                                                                                                     >  1:1241255/1‑143 (MQ=255)

                                            aGTGGCATTTAGATCTATGACGTATCTGGCAAACCATACCACATAAGAAGAGCCATCATCTTTTTGTGGATCAAAAAAGCCCGAACCGTAGGACGGATAAGACGGTGGGGTCGCATCCGGGAATAGGTGCATGATGCCTGATg                                                                                                     >  2:991746/1‑143 (MQ=255)

                                              tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGCTGCCTGCTGCg                                                                                                   >  2:472109/1‑143 (MQ=255)

                                              tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCg                                                                                                   >  2:295364/1‑143 (MQ=255)

                                              tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCAGGATGGCTGATGCg                                                                                                   >  2:659974/1‑143 (MQ=255)

                                               ggCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGa                                                                                                  <  1:761405/143‑1 (MQ=255)

                                                gCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGTCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGAc                                                                                                 >  2:291367/1‑143 (MQ=255)

                                                gCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGAc                                                                                                 >  1:920544/1‑143 (MQ=255)

                                                  aTTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGc                                                                                               <  2:339219/143‑1 (MQ=255)

                                                        aTCTATGACGTATCTGGCAAACCATGCCCCATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCTAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTcgc                                                                                         <  2:642137/143‑1 (MQ=255)

                                                        aTCTATGACGCACCTGGCAAACCCTGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCAAACCGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTcgc                                                                                         <  2:256825/143‑1 (MQ=14)

                                                         tCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTcgcg                                                                                        >  2:134213/1‑143 (MQ=255)

                                                          gcaTGCCGTATGTGGCGCACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGt                                                                                       <  1:1354808/141‑1 (MQ=11)

                                                           tATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGGCGCTGTcgcgac                                                                                      >  2:761016/1‑141 (MQ=255)

                                                           tATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTc                                                                                      <  2:1228044/143‑1 (MQ=255)

                                                           tATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTc                                                                                      >  2:69755/1‑143 (MQ=255)

                                                              gaagTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGACCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTa                                                                                   <  2:512390/140‑1 (MQ=255)

                                                               aCGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCAGGCTCAAGCGTTTACGCCGCATCCGGCAATTGGTGCCTGATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                                  >  2:310410/1‑143 (MQ=17)

                                                                 gTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGGCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCg                                                                                >  2:58369/1‑143 (MQ=255)

                                                                  tATCTGGCAACCCCTGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCCAACCGTAGTCTTGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGt                                                                               <  1:88027/143‑1 (MQ=14)

                                                                   aTCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTg                                                                              >  2:538210/1‑143 (MQ=255)

                                                                    tcgggacatccgtGCCCGGTTCGGCCCCGTCGCGTCTTATCGTGCCTACAAGGAGTGCGAACCGTAGGCCGGATAAGGCGTGTCCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGc                                                                             <  1:69117/131‑1 (MQ=11)

                                                                     cTGGCAAACCCTGCCCGATGCTACGCTGTCGCGTCATAACGTGCCTACAAATAGTCCGAACCGTAGGCCGCATAACGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGcc                                                                            <  2:432120/143‑1 (MQ=14)

                                                                      tGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCCGTCGCGTCTTAGCGTGCCt                                                                           >  1:1079713/1‑143 (MQ=255)

                                                                       ggCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTa                                                                          >  2:382004/1‑143 (MQ=255)

                                                                        gCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTAc                                                                         <  2:1276928/143‑1 (MQ=255)

                                                                          aaaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACaa                                                                       <  2:493248/143‑1 (MQ=255)

                                                                          aaaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACaa                                                                       <  2:570720/143‑1 (MQ=255)

                                                                           aaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATTCGACGCTGTCGCGTCTTATCCTGCCcacaca                                                                      >  1:834164/1‑141 (MQ=255)

                                                                           aaCCACTCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACaaa                                                                      <  1:335690/143‑1 (MQ=255)

                                                                             ccATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATa                                                                    <  2:953652/143‑1 (MQ=255)

                                                                              cATGCCAGATGCGACGCCGTGGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAg                                                                   <  1:899498/143‑1 (MQ=255)

                                                                                tGCCCGGTGCGACGCTGTCCCGCCTCATCGGGCCTACAAGGAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTc                                                                 <  1:81900/143‑1 (MQ=17)

                                                                                tGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAggc                                                                 >  2:679455/1‑141 (MQ=255)

                                                                                cgCCCCATGCGACGCTGTCGCGTCTGATCGTGCCTACAAACAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTc                                                                 <  2:531442/142‑1 (MQ=255)

                                                                                agcgcgaatgaaCGGTGGCGCGTCTAATCGTTGCTTTTAATAGCCCGACCCGTGGGCTGGTTAGGGCGTTTAGGCCGCATCCGGCAGTTGGGGCATGATGCCTGATGCGACGCTGTCGCGTCTTATGGTGCCTACAAAGAGTc                                                                 <  1:178325/132‑1 (MQ=9)

                                                                                 tctggtggctaggCTCTCGCGTCGTATCGTGGCGACAAATTGTCCGACCCGTAGGCCGTAGAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTcc                                                                <  1:1106179/131‑1 (MQ=14)

                                                                                  cccGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGCCGCGTCTTATCGGGCCTACatctgggccg                                                               >  1:558860/1‑134 (MQ=11)

                                                                                   ccGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATGGTCCGa                                                              >  1:421164/1‑143 (MQ=255)

                                                                                   ccGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGGTCCTACatagcggccgg                                                              >  1:526091/1‑133 (MQ=11)

                                                                                     gataagacgcgacagcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCGTGCCTACAAAGAGGCCGGAc                                                            >  1:1052171/15‑143 (MQ=11)

                                                                                          gACGCCGTCGCGTCTTATCGTGCCTACAAAGAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCAGCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAg                                                       <  2:74758/143‑1 (MQ=255)

                                                                                           aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACCTATATTCCGacacggagg                                                      >  1:224501/1‑135 (MQ=14)

                                                                                           aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAGTAGTCCGGACCGTAgg                                                      >  2:133038/1‑143 (MQ=255)

                                                                                            cgcgggcgcgCCTCAGCGTGCCTACAAGTACGCCAAACCGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGc                                                     <  1:673923/137‑1 (MQ=17)

                                                                                             gCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGcc                                                    <  2:538579/143‑1 (MQ=255)

                                                                                             gCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAAGCCGGATAAGGCGTTTACGCCCCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCCTATCCCGCCTAGAAATAGACCGAACCGGAGGcc                                                    >  1:134286/1‑143 (MQ=14)

                                                                                              cggTCGCGTCTGATCGTGGCTAGAAGTAGTCCGACCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCg                                                   <  1:956572/141‑1 (MQ=17)

                                                                                                   gcgTCTTAGCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑aa                                             <  2:847077/143‑1 (MQ=255)

                                                                                                        tgatggTGCCTACAAGTAGTCCAAACCGTAGGTCGGACAAGGCGTTTGCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGt                                        <  1:241667/138‑1 (MQ=18)

                                                                                                        gttttctggcttcAAGTAGCCCGAACCGTAGGCGTGATTCGGCTTTTTATGCGCTTCCGGTAATTGGTGCATTATGTCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGt                                        <  1:1166280/131‑1 (MQ=12)

                                                                                                              tGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGGGCCTACAAATAGGCCGGACCGGAGGCCGGAT‑AAGGCGtgcgcgg                                  >  1:1010561/1‑137 (MQ=14)

                                                                                                              tGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCGTGCCTACAAAGAGGCCGGACCGGAGGCCGGAT‑CAGGCGTGTgcgc                                  >  1:1010556/1‑143 (MQ=14)

                                                                                                               gCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGACGTTCTGCCATGATGACTGAAGCGCCGCTGTCGCGTCTTGTCGGGCCTACATAGGGCCCGGACCGGAGGCCGGATAAAGGCGttaagcc                                  >  1:960701/1‑138 (MQ=2)

                                                                                                               gCCGACAAATAGGGCGAAACGTAGGCTGGACAGGGCGTTTATGCACTGTAACGTAAAAGGTACATGATACCTGATGGGACGCTGTCGCGTCTTATAGAGATCAAGAGTGGTCCGTATCGTAGGCCGGAT‑AAGGCGTTTAcgcc                                 <  1:24865/143‑1 (MQ=9)

                                                                                                                  tACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAGGGTCCGAATCGTTGGCCCGGT‑AAAGCGgttcacccccc                              >  1:931369/1‑135 (MQ=1)

                                                                                                                   aCAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACACATAGTCCGCACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCAt                             >  2:784571/1‑143 (MQ=255)

                                                                                                                   aCAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGAGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAACGAAAACAGGAT‑AAGGCGATTACGCCGCAt                             >  2:239978/1‑143 (MQ=18)

                                                                                                                      aagaGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCg                          <  2:389946/140‑1 (MQ=255)

                                                                                                                          gTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCaa                      >  2:1263266/1‑143 (MQ=255)

                                                                                                                          gTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCGGGCCTACCAATGGGCCGGACCGTTGGCCGGGT‑AAGGCGGTCGCGCCGCATCCGGCag                      >  1:360426/1‑142 (MQ=11)

                                                                                                                            ccGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTGCAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCCCATCCCTCAAtt                    >  2:839318/1‑143 (MQ=255)

                                                                                                                                  cGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCa              <  2:602810/143‑1 (MQ=255)

                                                                                                                                   gtctgCCGGACAGCGCCTTTACGCCGCATCCCGCATGTGGTGCGTGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCat             <  1:748821/139‑1 (MQ=14)

                                                                                                                                      ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCatgat          >  2:596833/1‑143 (MQ=255)

                                                                                                                                       gCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCatgatg         >  2:1259429/1‑143 (MQ=255)

                                                                                                                                              aaGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACATATAGTCCGGCCCGTGCGCCGGAT‑AAGGGGGTTACGCCCCAGCCCGCAATTCGTGTCTGATCCCTgcta  >  1:433493/1‑140 (MQ=18)

                                                                                                                                              aaGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATg  <  2:695574/143‑1 (MQ=255)

CCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGAT‑AAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATG  >  NC_000913/4027240‑4027524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.