| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3324949 | 53 (0.850) | 5 (0.090) | 5/262 | 7.8 | 9.2% | intergenic (‑40/+50) | folP/ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo |
| ? | NC_000913 | = 3324957 | 49 (0.850) | intergenic (‑48/+42) | folP/ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCCGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCATTGTC > NC_000913/3324820‑3325091 | aTCCGAAAAGGAAGCAGGCGTGACGTTGCGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCggg < 1:780294/143‑1 (MQ=255) ccGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGGGCGTGCTCCGGGGt < 1:645758/143‑1 (MQ=255) ataaaaGTAATCAGGCGGGACGTTGAGGAGCCCCATTCCGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGtt < 1:616811/141‑1 (MQ=255) gAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGACGTTATCCCTGGTATGAATTGGTAAGACAAAACCCCGGCGCACGcccgtgggatt > 1:188961/1‑135 (MQ=255) gAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGC‑AAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCTCCGGCGtttt < 2:444297/143‑1 (MQ=255) gaagggAGTCGGGCGGGACGTTGAGGATCCCCATGACGTGAGGATGGCTAAGGGCCAGTGAAGGACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGtttt < 2:423493/139‑1 (MQ=255) gaGGAATCCGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGATAAGTTTCTGTGAAGTCCCCTGGCTAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCg < 2:70801/142‑1 (MQ=255) aaGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCg < 2:511064/143‑1 (MQ=255) gAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGGTTTCggga > 2:953660/1‑141 (MQ=255) cAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACaaa < 2:344948/143‑1 (MQ=255) aGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGAGGTTATCCCTGGTATGAATTGATAAGAAAAAACGCCGGGGGGCGCCCCGGGGGTTGCGGTagagag > 1:189681/1‑138 (MQ=255) cGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACa < 1:611195/143‑1 (MQ=255) ggcggtGAGGATCCCCATGGCGTGAGGATGGCTAAGGTCCAGTGAAGGACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTc < 1:336069/138‑1 (MQ=255) ggtggAGGATCCCCGTTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGGGGCCGCCCCAGGGTTTTCGGTACAAATACAGTCAt < 2:80348/139‑1 (MQ=255) cGTTGAGGATCCCCATGACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCAt < 2:375085/143‑1 (MQ=255) ttGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATCCAGTCATCt > 1:88932/1‑143 (MQ=255) aaTCCCTATTACGTGAGGATGGCTAAGGTCCAGTGAAGTAGCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGc < 1:350475/142‑1 (MQ=255) tCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCgg < 1:608729/143‑1 (MQ=255) tCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGAGGCgg > 2:148705/1‑143 (MQ=255) cccATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGAGAAGAAACAACCGCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGa > 2:379862/1‑143 (MQ=255) cATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAac < 2:995348/143‑1 (MQ=255) aCGTGAGGCTGGCTTAGGTCCAGTGAAGTACCCTGGGCAGAGAGTTTCATGATGTTAGCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAacttac < 2:271365/143‑1 (MQ=255) tGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAAACCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTg > 2:381310/1‑143 (MQ=255) aGGATGGCTAAGTTCCAGTGAAGTACTCTGGGCAAAGGGTTTCATGATGTTATCCCTGGCATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTc < 2:539452/143‑1 (MQ=255) tGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAAGCGCTAAGAAAAAACCCCGGAGCACGCCCCGGGGCTTTCGGTACAAATACAGTCATCTGATGCGGGGAATTCCTTGTCGGCt > 2:183602/1‑143 (MQ=255) ggCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTa < 2:388794/143‑1 (MQ=255) gCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTaa < 2:859449/143‑1 (MQ=255) gccacttaaGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAGATACAGTCATCTGATGCGGGATCTTACTTGTCGCCTAACTGctct < 2:615206/136‑1 (MQ=255) cAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCAGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTCACTGCTCTGa > 1:572414/1‑143 (MQ=255) tttattaaccTGTGCAAAGACTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACAt < 1:1073090/135‑1 (MQ=255) ccTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTAc > 1:844752/1‑143 (MQ=255) tGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTAccc < 1:540109/143‑1 (MQ=255) cAATGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCACGGAGCACGCCCCGGAGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGt > 2:180219/1‑143 (MQ=255) agagTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGCCATGGTGTTACTCGGGTTCg > 1:942121/1‑143 (MQ=255) tttCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGt > 1:768012/1‑143 (MQ=255) cccttATCCCTGCTATGCATTGATCAGGAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGt < 2:177802/140‑1 (MQ=255) ggtATCCCCGGTATGAAGTGATAAGAAAAAACCCCGGGGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtc < 2:369240/141‑1 (MQ=255) tagcctgggTATGAAGTGATAAGAAAAAACCCCGGAGCACGCCCCGGTGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtcat < 2:1005678/136‑1 (MQ=255) tATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtcat < 1:949262/143‑1 (MQ=255) atcgcgggcaggagttGATGAGAAAAAGCCGCGGAGCACGCCTAGGGGTTTTAGTATCAAATACGGGCATCGGATGCGGGAAGTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtcatc < 2:484990/129‑1 (MQ=255) cccTGGTATGAATTGATAAGAAAAAACCCCGGAGCCCGCCCCGGCTTTTCCGCTGCAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCaa < 1:246360/143‑1 (MQ=255) cTGGTATGAATTGATACGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGAGGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGCTCGGCGTACGGGGGTCATCAAcc > 2:705619/1‑143 (MQ=255) tacaTTGATTAGACAAAACCGCTGAGCTCGCCCTGGGTTTTTCTGTACAATTACAGTCATCTGATGCGTGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCTGTTCATCAACCGGACga < 2:406044/140‑1 (MQ=255) tGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACga > 1:360516/1‑143 (MQ=255) gAATTGATAAGAAAAAACCCCGGCGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTAGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgag > 1:1040097/1‑143 (MQ=255) gAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACCAATAAAGTCCCGTCAGTCGGGAAATTAATTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgag > 1:459884/1‑143 (MQ=255) aaTTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgagg > 1:466661/1‑143 (MQ=255) aTAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGCGGCGCCt > 2:369870/1‑143 (MQ=255) aTAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATAAAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGACt > 1:365384/1‑143 (MQ=255) aaGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGGGGAGCCttt > 1:476808/1‑143 (MQ=255) gAAAAAACCCCAGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTgg > 2:912581/1‑143 (MQ=255) aagtcggcccGGCGCTCGCCCCTGAGGTTTCGGTACACAGACAGTCATCTGATGCGGGAACTTACTGGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGa < 2:113616/136‑1 (MQ=255) aaaaaaCCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGa < 1:630592/143‑1 (MQ=255) cccGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCAt > 2:961268/1‑143 (MQ=255) aaGCACGCCCCGGGGTGTACGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGCCGCCTAACTGCTCTTACATAGTCTGACCCGGGTTCGGCGTACGCGGGTCATCAACCGGACGAGGAGCCTTTGGACTACCATTGTc < 1:938180/142‑1 (MQ=255) | ATCCGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCATTGTC > NC_000913/3324820‑3325091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |