Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503–1979270 1979278 9–776 72 [0] [0] 72 insB1–insA insB1, insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785020 (0.000)71 (1.240) 57/266 0.0 100% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCT  >  NC_000913/1979141‑1979419
                                                                                                                                          |                                                                                                                                            
ctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                          >  2:610119‑M2/139‑143 (MQ=255)
ctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                          <  2:501706‑M2/5‑1 (MQ=255)
  ttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                                                                        >  2:1004900‑M2/137‑143 (MQ=255)
      acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                                                                    >  1:680001‑M2/133‑143 (MQ=255)
      acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattctcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                                                                    >  1:973423‑M2/133‑143 (MQ=255)
          atctaagacttttcctaaatcgacgcaactgtactcgtcactacacgcgcatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttt                                                                                                                                <  2:147123‑M2/15‑1 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                             >  1:8524‑M2/126‑143 (MQ=255)
                  tttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                                                                        <  2:553103‑M2/23‑1 (MQ=255)
                  ttttgccgaaacctacgcaactgtactcgccactacacgcacatacaacggagggaggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaccataaatgTATAGGTCCTACTGTTGTTTTgg                                                                                                                        <  1:384783‑M2/23‑1 (MQ=255)
                  tctctcctaagtcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                                                                        <  1:247381‑M2/23‑1 (MQ=255)
                      tcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacccaaaacactcaattacttaacataaatgTATAAGTCCTACTTTTGTTTTGGctgt                                                                                                                    >  2:241323‑M2/117‑143 (MQ=255)
                        ctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaagaatgcgtggtgcagatcacacaaaacactcaattacttaccataaacgTCTaagccatgctcttgcttctggcgtct                                                                                                                  >  2:463173‑M2/115‑134 (MQ=255)
                          taggcgacgcgtctgtactcgtcactacacgcgcatacaacggaggggggctgcgattgtcaataatgggtgatggagatcacacaaaacactcaattacttgacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAttt                                                                                                                <  1:160078‑M2/31‑1 (MQ=255)
                            atcgaggcaacggtactcgtctctccacgcacatacaacggaggggggctgcgcttttcaataatgcgtgatgcagatcacacaaaactctcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCa                                                                                                              <  1:556609‑M2/33‑1 (MQ=255)
                            atcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaatactgcgtgatgcggatcacacaaaacactcaattacttaacataaatgTATAAGTCATACATTTGTTTTGGGTGTATTtcc                                                                                                              >  1:15220‑M2/111‑142 (MQ=255)
                             tcgacgcaactgtactcgtcacaacaaacacatacaacaaagggggcctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCaa                                                                                                             <  2:946501‑M2/34‑1 (MQ=255)
                                acgcgactggacgcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCt                                                                                                          <  1:46322‑M2/37‑1 (MQ=255)
                                   caactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGtt                                                                                                       <  2:212622‑M2/40‑1 (MQ=255)
                                    aactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGTGTGTATTTCAATCTGTTa                                                                                                      >  1:1026038‑M2/103‑143 (MQ=255)
                                    aactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagaccacgcaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATGCCACTCAGTTa                                                                                                      >  1:394146‑M2/103‑143 (MQ=255)
                                        gtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                                                                  <  2:884854‑M2/45‑1 (MQ=255)
                                         tactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTCTGTTTTGGGTGTATTTCAATCTGTTAAAAAg                                                                                                 >  1:365420‑M2/98‑143 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                            <  2:233308‑M2/51‑1 (MQ=255)
                                                 actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                                                           <  2:941627‑M2/52‑1 (MQ=255)
                                                 actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                                                           >  1:941627‑M2/90‑141 (MQ=255)
                                                   tacacgcgcgttcgacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgcta                                                                                       <  1:816379‑M2/56‑1 (MQ=255)
                                                       cgcacataccacggaggcgggctgcgattttcaataatgcgtgatgcagatcacaccaaacactcaattacttaacataaatgTATACGTCATACTTTTGTTTTGGGTGTATTTCCATCTGTTAAAAAGTTTTTcgctacgct                                                                                   <  2:63338‑M2/60‑1 (MQ=255)
                                                          acatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagc                                                                                >  1:154163‑M2/81‑143 (MQ=255)
                                                           catacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagca                                                                               <  2:766021‑M2/64‑1 (MQ=255)
                                                              acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTcgcaagc                                                                            >  1:452782‑M2/77‑143 (MQ=255)
                                                              acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagc                                                                            >  1:452241‑M2/77‑143 (MQ=255)
                                                                aacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAgccagcaa                                                                          >  2:365776‑M2/75‑143 (MQ=255)
                                                                   ggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCaaaaa                                                                       <  2:407784‑M2/72‑1 (MQ=255)
                                                                   ggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTGTTTCGCTACGCTAGCAAGCaaaaa                                                                       <  1:283921‑M2/72‑1 (MQ=255)
                                                                       gggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTTGGTGTATTTCAATATGTTAAAAACTTTTTATATACACTAACAAGGAAAAATGaa                                                                   >  1:900132‑M2/68‑143 (MQ=255)
                                                                        ggggctccgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaaa                                                                  <  2:1045608‑M2/77‑1 (MQ=255)
                                                                          ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACa                                                                <  2:285305‑M2/79‑1 (MQ=255)
                                                                             tgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGATCAAATAAAAGTGCTAGCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGa                                                             >  2:1055076‑M2/62‑143 (MQ=255)
                                                                               cgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATCCTTTTGTTTCGGGTGTATTTCCATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAACAAGGAACCAGGaat                                                           >  2:305097‑M2/60‑143 (MQ=255)
                                                                                gcttttcaataacgcgtgatggagatcacacaaaacactcaattacctaacatcaatgTATAAGTCATACTTTTGTTTTGGGTGTACTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                                                          <  1:369576‑M2/85‑1 (MQ=255)
                                                                                gattttcaataatgcgtgatgcagatcacccaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTACCCCAATCTGTTAAAAAATTTTTCTCTACCCTAGCAGGCAAAACTGCAACAGGaata                                                          >  2:1064907‑M2/59‑143 (MQ=255)
                                                                                gattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                                                          >  2:702461‑M2/59‑143 (MQ=255)
                                                                                 attttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTTGCAAGCAAAAGAGAAACATtaataa                                                         >  1:309451‑M2/58‑143 (MQ=255)
                                                                                 attttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGgagtac                                                         >  1:308232‑M2/58‑142 (MQ=255)
                                                                                   tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTATTTTAGGTGTACTTAAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAACAAACATGAAACaggaatacga                                                       >  1:806414‑M2/56‑140 (MQ=255)
                                                                                        ataatgcgtgatgcagatcacacaaaacactcgattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAAt                                                  <  1:130389‑M2/93‑1 (MQ=255)
                                                                                        ataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAAt                                                  >  2:571056‑M2/51‑143 (MQ=255)
                                                                                             gcgtgatgcagatcacacaaaacactcaattacttaacataaatgTGTAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTGAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACCGGAATAAGCGAAATGGGAt                                             >  1:799818‑M2/46‑143 (MQ=255)
                                                                                               gtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTATTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAAGAAAAAACAAAATGAGAAGt                                           >  2:1057981‑M2/44‑143 (MQ=255)
                                                                                               gtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGGCATACTTTTGTTTTGGGTGTATTTAAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCATAAATGAAGCAGGAATAATCGAAATGGGAGGt                                           >  2:319343‑M2/44‑143 (MQ=255)
                                                                                                tgatgcagatctcacaaaacggtcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGtt                                          <  1:938871‑M2/101‑1 (MQ=255)
                                                                                                tgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGtt                                          <  2:526744‑M2/101‑1 (MQ=255)
                                                                                                 gatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAATTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGAAATAATCGAAATGAGAtgtag                                         >  1:921843‑M2/42‑141 (MQ=255)
                                                                                                   tgcagatcacacaacactcttaattacttaatataagtgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTgcg                                       <  1:1050465‑M2/104‑1 (MQ=255)
                                                                                                    gcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTgcgc                                      >  2:948808‑M2/39‑143 (MQ=255)
                                                                                                        atcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAg                                  >  2:826273‑M2/35‑143 (MQ=255)
                                                                                                          cacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTAAGCTAGCCAGCAAAAATGAAAGAGGCATAATCTAAATGGGATGTTGCGCACAGTc                                >  2:946881‑M2/33‑143 (MQ=255)
                                                                                                              caaaacgctcgatgacctaacatgaatgTATAAGTCAGACTTTTGTTTGGGGTGTATATGAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCacaa                            <  1:1049514‑M2/115‑1 (MQ=255)
                                                                                                              caaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCaaaa                            >  1:646275‑M2/29‑143 (MQ=255)
                                                                                                               aaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAAt                           >  2:623057‑M2/28‑143 (MQ=255)
                                                                                                               aaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAAt                           >  1:549386‑M2/28‑143 (MQ=255)
                                                                                                                 aacactcgattacgtaacataaatgTATAAGTCATACTTTTGTTGTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATaa                         <  1:434464‑M2/118‑1 (MQ=255)
                                                                                                                       caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAcc                   <  2:203452‑M2/124‑1 (MQ=255)
                                                                                                                       caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAcc                   <  2:269152‑M2/124‑1 (MQ=255)
                                                                                                                        aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCg                  <  2:8524‑M2/125‑1 (MQ=255)
                                                                                                                        aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTAACCg                  >  2:556371‑M2/19‑143 (MQ=255)
                                                                                                                           tacttaccataaatgTATAAGTCATACGTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATCTTGCGCACAGTCAAAATAACTCACCGTaa               <  2:462087‑M2/128‑1 (MQ=255)
                                                                                                                           tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTaa               <  2:711267‑M2/128‑1 (MQ=255)
                                                                                                                              ttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAaata            >  2:422643‑M2/13‑143 (MQ=255)
                                                                                                                                 acatacatgTATAAGTCATACTTTTGTTTCGGGTGTATTTCAATCTGTGAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatc         <  2:42247‑M2/134‑1 (MQ=255)
                                                                                                                                 acataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatc         <  1:1004900‑M2/134‑1 (MQ=255)
                                                                                                                                        tgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCt  <  2:365420‑M2/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                            
GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCT  >  NC_000913/1979141‑1979419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.